MGE detailed information
MGE type: Mobilizable plasmid MGE length: 75938 bp
Accession: NZ_CP005088 Location: 1..75938 Organism: Sphingobium sp. TKS Replicon: plasmid pTK4
Accession: NZ_CP005088 Location: 1..75938 Organism: Sphingobium sp. TKS Replicon: plasmid pTK4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K426_RS28905 () | 1..1104 | + | 1104 | WP_004213366.1 | replication initiator protein A | - |
| K426_RS28910 () | 1133..1417 | - | 285 | WP_013038654.1 | hypothetical protein | - |
| K426_RS28915 () | 1417..2052 | - | 636 | WP_004213364.1 | Chromosome-partitioning ATPase Soj | VF |
| K426_RS28920 () | 2174..2806 | - | 633 | WP_013038655.1 | transcription elongation protein SprT | - |
| K426_RS28925 () | 3225..3548 | + | 324 | WP_013038657.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| K426_RS28930 () | 3545..3826 | + | 282 | WP_013038658.1 | helix-turn-helix domain-containing protein | - |
| K426_RS28935 () | 3839..4075 | + | 237 | WP_013038659.1 | hypothetical protein | - |
| K426_RS28945 () | 4244..4870 | + | 627 | WP_013038661.1 | histidine phosphatase family protein | - |
| K426_RS31680 () | 4867..5352 | - | 486 | WP_013038662.1 | hypothetical protein | - |
| K426_RS28955 () | 5368..6789 | - | 1422 | Protein_9 | Tn3 family transposase TnpA_ISMex22 | Transposase |
| K426_RS28960 () | 6823..7587 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K426_RS28965 () | 7651..8634 | + | 984 | WP_013040175.1 | alpha-ketoacid dehydrogenase subunit beta | - |
| K426_RS28970 () | 8631..8870 | + | 240 | WP_007682525.1 | lipoyl domain-containing protein | - |
| K426_RS28975 () | 8988..11522 | + | 2535 | WP_066564838.1 | Pesticin receptor | VF |
| K426_RS28980 () | 11693..12634 | + | 942 | WP_007682022.1 | XdhC family protein | - |
| K426_RS28985 () | 12631..13623 | + | 993 | WP_007682023.1 | molybdopterin-binding protein | - |
| K426_RS28990 () | 13662..15008 | + | 1347 | WP_007682024.1 | glutathione-disulfide reductase | - |
| K426_RS28995 () | 15143..16381 | - | 1239 | WP_007682027.1 | acyl-CoA dehydrogenase family protein | - |
| K426_RS29000 () | 16749..17501 | + | 753 | WP_007682029.1 | 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase | VF |
| K426_RS30960 () | 17825..18067 | + | 243 | WP_145907861.1 | hypothetical protein | - |
| K426_RS29005 () | 17950..18522 | + | 573 | WP_007682510.1 | 3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase | VF |
| K426_RS29010 () | 18583..19053 | + | 471 | WP_013040172.1 | nuclear transport factor 2 family protein | - |
| K426_RS29015 () | 19635..20639 | + | 1005 | WP_021319354.1 | FAD-binding protein | - |
| K426_RS29020 () | 20658..21422 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K426_RS31695 () | 21486..21848 | + | 363 | Protein_24 | TonB-dependent receptor | - |
| K426_RS29030 () | 21888..22640 | + | 753 | WP_015460611.1 | 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase | VF |
| K426_RS29035 () | 22662..23348 | + | 687 | WP_007682394.1 | EthD domain-containing protein | - |
| K426_RS29040 () | 23348..23710 | + | 363 | WP_007682395.1 | hypothetical protein | - |
| K426_RS29045 () | 23808..24572 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K426_RS29050 () | 24634..25691 | + | 1058 | Protein_29 | Solvent efflux pump outer membrane protein SrpC | VF |
| K426_RS29055 () | 25860..26108 | + | 249 | WP_007682496.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| K426_RS29060 () | 26105..26494 | + | 390 | WP_007682494.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| K426_RS29065 () | 26494..26799 | + | 306 | WP_007682492.1 | hypothetical protein | - |
| K426_RS29070 () | 26796..27194 | + | 399 | WP_007682491.1 | hypothetical protein | - |
| K426_RS29075 () | 27194..28156 | + | 963 | WP_007682488.1 | tyrosine-type recombinase/integrase | - |
| K426_RS29080 () | 28220..29317 | + | 1098 | WP_007683624.1 | IS630 family transposase ISBj5 | Transposase |
| K426_RS29085 () | 29363..29686 | - | 324 | Protein_36 | transposase | - |
| K426_RS29090 () | 29768..30631 | - | 864 | WP_004211466.1 | IS21 family transposase ISRel5 | Transposase |
| K426_RS29095 () | 30628..31180 | - | 553 | Protein_38 | IS21 family transposase ISBj11 | Transposase |
| K426_RS29100 () | 31177..32373 | - | 1197 | WP_007684572.1 | IS256 family transposase ISRm5 | Transposase |
| K426_RS29105 () | 32494..32697 | + | 204 | Protein_40 | helix-turn-helix transcriptional regulator | - |
| K426_RS29110 () | 32758..33522 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K426_RS29115 () | 33913..36285 | + | 2373 | WP_066564841.1 | Pesticin receptor | VF |
| K426_RS29120 () | 36456..37220 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K426_RS29125 () | 37413..38105 | + | 693 | WP_007685994.1 | hypothetical protein | - |
| K426_RS31000 () | 39309..39503 | - | 195 | WP_041386987.1 | ISNCY family transposase ISH7A | Transposase |
| K426_RS29140 () | 39539..40276 | - | 738 | WP_013038672.1 | hypothetical protein | - |
| K426_RS29145 () | 40434..43559 | - | 3126 | WP_013038673.1 | Mobilization protein A | Relaxase |
| K426_RS29150 () | 43736..44041 | + | 306 | WP_013038674.1 | conjugal transfer protein TraD | - |
| K426_RS29155 () | 44079..44315 | + | 237 | WP_013038675.1 | conjugal transfer protein TraD | - |
| K426_RS29160 () | 44308..44583 | + | 276 | WP_013038676.1 | hypothetical protein | - |
| K426_RS29165 () | 44580..44864 | + | 285 | WP_013038677.1 | hypothetical protein | - |
| K426_RS29170 () | 44861..45796 | + | 936 | WP_013038678.1 | HEPN domain-containing protein | - |
| K426_RS29175 () | 45793..46509 | + | 717 | WP_013038679.1 | SIMPL domain-containing protein | - |
| K426_RS29180 () | 46516..48177 | + | 1662 | WP_013038680.1 | Conjugal transfer protein TraG | VF |
| K426_RS29185 () | 48215..48676 | + | 462 | WP_013038681.1 | hypothetical protein | - |
| K426_RS29190 () | 48975..49418 | - | 444 | Protein_56 | Tn3 family transposase ISPsy42 | Transposase |
| K426_RS29195 () | 49479..50345 | - | 867 | WP_006961816.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| K426_RS29200 () | 50488..52275 | - | 1788 | Protein_58 | Tn3 family transposase TnpA_ISNpu13 | Transposase |
| K426_RS29205 () | 52394..53911 | + | 1518 | WP_015449228.1 | IS21 family transposase ISSsp4 | Transposase |
| K426_RS29210 () | 53898..54626 | + | 729 | WP_015449229.1 | IS21 family transposase ISSsp4 | Transposase |
| K426_RS29215 () | 54825..55973 | - | 1149 | Protein_61 | Tn3 family transposase TnpA_ISYps3 | Transposase |
| K426_RS29220 () | 56463..57374 | + | 912 | WP_015460618.1 | replication initiation protein | - |
| K426_RS29225 () | 57431..57712 | - | 282 | WP_015460617.1 | hypothetical protein | - |
| K426_RS29230 () | 57738..58373 | - | 636 | WP_015460616.1 | Chromosome-partitioning ATPase Soj | VF |
| K426_RS29235 () | 58473..59237 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K426_RS29240 () | 59256..60206 | - | 951 | WP_066564807.1 | metallophosphoesterase | - |
| K426_RS29245 () | 60581..63847 | - | 3267 | WP_025547079.1 | error-prone DNA polymerase | - |
| K426_RS29250 () | 64105..64446 | - | 342 | WP_025547078.1 | hypothetical protein | - |
| K426_RS32035 () | 64472..64633 | - | 162 | WP_162195970.1 | hypothetical protein | - |
| K426_RS29255 () | 64697..66217 | - | 1521 | WP_025547077.1 | DNA polymerase Y family protein | - |
| K426_RS29260 () | 66132..66893 | - | 762 | WP_025547075.1 | damage-inducible protein | - |
| K426_RS31985 () | 67022..67183 | + | 162 | WP_157846831.1 | hypothetical protein | - |
| K426_RS31715 () | 67177..67368 | + | 192 | WP_128830664.1 | hypothetical protein | - |
| K426_RS29265 () | 67355..67690 | + | 336 | WP_066564805.1 | hypothetical protein | - |
| K426_RS29270 () | 67806..68057 | + | 252 | WP_082749265.1 | hypothetical protein | - |
| K426_RS29275 () | 68462..68722 | - | 261 | WP_145907848.1 | hypothetical protein | - |
| K426_RS32270 () | 68797..68949 | + | 153 | WP_162854653.1 | hypothetical protein | - |
| K426_RS29285 () | 68979..69638 | + | 660 | WP_066564798.1 | SOS response-associated peptidase family protein | - |
| K426_RS29290 () | 69886..70536 | + | 651 | WP_066564796.1 | SOS response-associated peptidase family protein | - |
| K426_RS29295 () | 70533..70727 | + | 195 | WP_066564794.1 | hypothetical protein | - |
| K426_RS29300 () | 70911..71333 | + | 423 | WP_082749261.1 | hypothetical protein | - |
| K426_RS29305 () | 71395..71988 | - | 594 | WP_013039114.1 | Tn3 family transposase ISPsy42 | Transposase |
| K426_RS29310 () | 72128..75085 | + | 2958 | WP_011627729.1 | Tn3 family transposase TnpA_ISAzs17 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|