MGE detailed information
MGE type: Mobilizable plasmid MGE length: 87635 bp
Accession: NZ_CP005087 Location: 1..87635 Organism: Sphingobium sp. TKS Replicon: plasmid pTK3
Accession: NZ_CP005087 Location: 1..87635 Organism: Sphingobium sp. TKS Replicon: plasmid pTK3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K426_RS28465 () | 1..960 | + | 960 | WP_066564792.1 | replication initiator protein A | - |
| K426_RS28470 () | 1552..4509 | - | 2958 | WP_011627729.1 | Tn3 family transposase TnpA_ISAzs17 | Transposase |
| K426_RS28475 () | 4649..5242 | + | 594 | WP_013039114.1 | Tn3 family transposase ISPsy42 | Transposase |
| K426_RS28480 () | 5304..5726 | - | 423 | WP_082749261.1 | hypothetical protein | - |
| K426_RS28485 () | 5910..6104 | - | 195 | WP_066564794.1 | hypothetical protein | - |
| K426_RS28490 () | 6101..6751 | - | 651 | WP_066564796.1 | SOS response-associated peptidase family protein | - |
| K426_RS28495 () | 6999..7658 | - | 660 | WP_066564798.1 | SOS response-associated peptidase family protein | - |
| K426_RS32265 () | 7688..7840 | - | 153 | WP_162854653.1 | hypothetical protein | - |
| K426_RS28505 () | 7915..8175 | + | 261 | WP_145907848.1 | hypothetical protein | - |
| K426_RS28510 () | 8580..8831 | - | 252 | WP_082749265.1 | hypothetical protein | - |
| K426_RS28515 () | 8947..9282 | - | 336 | WP_066564805.1 | hypothetical protein | - |
| K426_RS31620 () | 9269..9460 | - | 192 | WP_128830664.1 | hypothetical protein | - |
| K426_RS31975 () | 9454..9615 | - | 162 | WP_157846831.1 | hypothetical protein | - |
| K426_RS28520 () | 9744..10505 | + | 762 | WP_025547075.1 | damage-inducible protein | - |
| K426_RS28525 () | 10420..11940 | + | 1521 | WP_025547077.1 | DNA polymerase Y family protein | - |
| K426_RS32030 () | 12004..12165 | + | 162 | WP_162195970.1 | hypothetical protein | - |
| K426_RS28530 () | 12191..12532 | + | 342 | WP_025547078.1 | hypothetical protein | - |
| K426_RS28535 () | 12790..16056 | + | 3267 | WP_025547079.1 | error-prone DNA polymerase | - |
| K426_RS28540 () | 16431..17381 | + | 951 | WP_066564807.1 | metallophosphoesterase | - |
| K426_RS28545 () | 17400..18164 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K426_RS28550 () | 18264..18899 | + | 636 | WP_015460616.1 | Chromosome-partitioning ATPase Soj | VF |
| K426_RS28555 () | 18925..19206 | + | 282 | WP_015460617.1 | hypothetical protein | - |
| K426_RS28560 () | 19263..20174 | - | 912 | WP_015460618.1 | replication initiation protein | - |
| K426_RS28565 () | 20664..21812 | + | 1149 | Protein_24 | Tn3 family transposase TnpA_ISYps3 | Transposase |
| K426_RS28570 () | 22011..22739 | - | 729 | WP_015449229.1 | IS21 family transposase ISSsp4 | Transposase |
| K426_RS28575 () | 22726..24243 | - | 1518 | WP_015449228.1 | IS21 family transposase ISSsp4 | Transposase |
| K426_RS28580 () | 24362..26149 | + | 1788 | Protein_27 | Tn3 family transposase TnpA_ISNpu13 | Transposase |
| K426_RS28585 () | 26292..27158 | + | 867 | WP_006961816.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| K426_RS31625 () | 27817..28199 | - | 383 | Protein_29 | type IV secretory system conjugative DNA transfer family protein | - |
| K426_RS30890 () | 28260..28812 | - | 553 | Protein_30 | AAA family ATPase | - |
| K426_RS28595 () | 28805..29029 | - | 225 | WP_015460621.1 | conjugal transfer protein TraD | - |
| K426_RS28600 () | 29067..29372 | - | 306 | WP_015460622.1 | conjugal transfer protein TraD | - |
| K426_RS28605 () | 29545..32679 | + | 3135 | WP_015460623.1 | Mobilization protein A | Relaxase |
| K426_RS28610 () | 32687..33409 | + | 723 | WP_015460630.1 | hypothetical protein | - |
| K426_RS28615 () | 33819..34583 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K426_RS28620 () | 34612..34866 | + | 255 | WP_007682112.1 | hypothetical protein | - |
| K426_RS28625 () | 34952..35842 | + | 891 | WP_066564812.1 | haloalkane dehalogenase | - |
| K426_RS28630 () | 36002..36766 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K426_RS28635 () | 36811..37371 | + | 561 | WP_029987071.1 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| K426_RS28640 () | 37403..37711 | + | 309 | WP_007682056.1 | BrnT family toxin | Toxin Detail |
| K426_RS28645 () | 37692..38024 | + | 333 | WP_007682049.1 | BrnA antitoxin family protein | Antitoxin Detail |
| K426_RS28650 () | 38486..39181 | - | 696 | Protein_42 | IS5 family transposase ISMex40 | Transposase |
| K426_RS31980 () | 39343..39636 | + | 294 | WP_145907151.1 | hypothetical protein | - |
| K426_RS28655 () | 39581..40249 | - | 669 | WP_081440685.1 | EthD domain-containing protein | - |
| K426_RS28660 () | 40295..41056 | - | 762 | WP_007682039.1 | 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase | VF |
| K426_RS28665 () | 41103..42077 | - | 975 | Protein_46 | Rieske 2Fe-2S domain-containing protein | - |
| K426_RS28670 () | 42130..42894 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K426_RS28675 () | 42913..43353 | - | 441 | WP_082749263.1 | Gluconate 5-dehydrogenase | VF |
| K426_RS28680 () | 43420..44334 | - | 915 | WP_013040178.1 | acetylxylan esterase | - |
| K426_RS28685 () | 44556..45314 | - | 759 | WP_007686274.1 | TetR/AcrR family transcriptional regulator | - |
| K426_RS28690 () | 45774..47417 | + | 1644 | WP_059153310.1 | Medium-chain fatty-acid--CoA ligase | VF |
| K426_RS28695 () | 47414..48400 | + | 987 | Protein_52 | thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha | - |
| K426_RS28700 () | 48438..49202 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K426_RS28705 () | 49221..49637 | - | 417 | WP_066564816.1 | hypothetical protein | - |
| K426_RS31645 () | 50080..50346 | + | 267 | WP_145907851.1 | HTH domain-containing protein | - |
| K426_RS31650 () | 50511..51053 | + | 543 | Protein_56 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| K426_RS31655 () | 51126..51419 | + | 294 | WP_086400806.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| K426_RS28715 () | 51446..51814 | + | 369 | WP_030092291.1 | HEPN domain-containing protein | - |
| K426_RS28720 () | 51893..52561 | + | 669 | WP_066564817.1 | ParA family protein | - |
| K426_RS28725 () | 52554..52841 | + | 288 | WP_021238836.1 | hypothetical protein | - |
| K426_RS28730 () | 52874..53929 | - | 1056 | WP_030092293.1 | replication initiator protein A | - |
| K426_RS28735 () | 54512..54748 | - | 237 | WP_021238840.1 | conjugal transfer protein TraD | - |
| K426_RS28740 () | 54843..55091 | - | 249 | WP_030092294.1 | conjugal transfer protein TraD | - |
| K426_RS28745 () | 55266..57362 | + | 2097 | Protein_64 | Mobilization protein A | Relaxase |
| K426_RS28750 () | 57432..58298 | - | 867 | WP_006953933.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| K426_RS28755 () | 58441..61350 | - | 2910 | WP_021224283.1 | Tn3 family transposase TnpA_ISYps3 | Transposase |
| K426_RS28760 () | 61474..62469 | + | 996 | Protein_67 | Ti-type conjugative transfer relaxase TraA | - |
| K426_RS28765 () | 62479..63180 | + | 702 | WP_021238843.1 | hypothetical protein | - |
| K426_RS28770 () | 63201..63578 | + | 378 | WP_145907854.1 | hypothetical protein | - |
| K426_RS28775 () | 63629..63901 | + | 273 | WP_021238845.1 | WGR domain-containing protein | - |
| K426_RS28780 () | 63964..64242 | - | 279 | WP_021317602.1 | BrnA antitoxin family protein | - |
| K426_RS28785 () | 64434..65444 | - | 1011 | WP_066564820.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| K426_RS28790 () | 65482..68373 | - | 2892 | WP_066553494.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| K426_RS28795 () | 68498..69112 | + | 615 | WP_066553497.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| K426_RS28800 () | 69104..73477 | - | 4374 | WP_066564824.1 | hypothetical protein | - |
| K426_RS28805 () | 73526..74290 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K426_RS31665 () | 74347..74787 | + | 441 | Protein_77 | TonB-dependent receptor | - |
| K426_RS28815 () | 74827..75579 | + | 753 | WP_015460611.1 | 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase | VF |
| K426_RS28820 () | 75601..76287 | + | 687 | WP_007682394.1 | EthD domain-containing protein | - |
| K426_RS28825 () | 76287..76649 | + | 363 | WP_007682395.1 | hypothetical protein | - |
| K426_RS28830 () | 76747..77511 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K426_RS28835 () | 77572..78102 | + | 531 | Protein_82 | Maleylacetate reductase | VF |
| K426_RS28840 () | 78214..78972 | - | 759 | WP_007687861.1 | esterase | - |
| K426_RS28850 () | 79797..79952 | + | 156 | Protein_84 | glutathione S-transferase | - |
| K426_RS28855 () | 79989..80753 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| K426_RS28860 () | 80815..81872 | + | 1058 | Protein_86 | Solvent efflux pump outer membrane protein SrpC | VF |
| K426_RS28865 () | 82046..82441 | + | 396 | WP_066564825.1 | CopG family transcriptional regulator | - |
| K426_RS28870 () | 82438..83400 | + | 963 | WP_066564827.1 | tyrosine-type recombinase/integrase | - |
| K426_RS28875 () | 83397..84017 | - | 621 | WP_066564828.1 | phosphoglycerate mutase family protein | - |
| K426_RS28880 () | 84020..84418 | - | 399 | WP_066564829.1 | type II toxin-antitoxin system VapC family toxin | - |
| K426_RS28885 () | 84415..84690 | - | 276 | WP_038293132.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| K426_RS28890 () | 85136..85777 | + | 642 | WP_066564830.1 | transcription elongation protein SprT | - |
| K426_RS28895 () | 85833..86468 | - | 636 | WP_066564837.1 | DJ-1/PfpI family protein | - |
| K426_RS28900 () | 86633..87286 | + | 654 | WP_066564831.1 | ParA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|