MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 57850 bp
Accession: NZ_CP004378 Location: 2883656..2941505 Organism: Burkholderia pseudomallei NAU35A-3 Replicon: chromosome
Accession: NZ_CP004378 Location: 2883656..2941505 Organism: Burkholderia pseudomallei NAU35A-3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BBU_RS29335 () | 2879499..2880080 | - | 582 | WP_041222696.1 | recombinase family protein | - |
| BBU_RS39680 () | 2880389..2881126 | + | 738 | WP_129111411.1 | hypothetical protein | - |
| BBU_RS39685 () | 2881313..2881603 | - | 291 | Protein_2330 | zinc ribbon domain-containing protein | - |
| BBU_RS39690 () | 2881604..2881972 | - | 369 | Protein_2331 | transposase family protein | - |
| BBU_RS39695 () | 2881973..2883535 | - | 1563 | Protein_2332 | site-specific integrase | - |
| BBU_RS39700 () | 2884241..2884522 | + | 282 | WP_139342043.1 | SEC-C domain-containing protein | - |
| BBU_RS38230 () | 2884647..2885027 | + | 381 | WP_038776334.1 | hypothetical protein | - |
| BBU_RS38235 () | 2885279..2885848 | + | 570 | WP_015984987.1 | hypothetical protein | - |
| BBU_RS38240 () | 2886102..2886284 | + | 183 | WP_015984986.1 | hypothetical protein | - |
| BBU_RS29365 () | 2886606..2887274 | - | 669 | WP_041192106.1 | SOS response-associated peptidase family protein | - |
| BBU_RS29370 () | 2887360..2888001 | + | 642 | WP_011325405.1 | hypothetical protein | - |
| BBU_RS29375 () | 2888134..2889225 | - | 1092 | WP_041191838.1 | DUF3396 domain-containing protein | - |
| BBU_RS38245 () | 2889253..2889987 | - | 735 | WP_015984972.1 | VRR-NUC domain-containing protein | - |
| BBU_RS38250 () | 2889984..2890544 | - | 561 | WP_015984955.1 | PAAR domain-containing protein | - |
| BBU_RS29380 () | 2890723..2891622 | - | 900 | WP_025992335.1 | hypothetical protein | - |
| BBU_RS29385 () | 2891684..2892226 | - | 543 | WP_015984991.1 | lysis system i-spanin subunit Rz | - |
| BBU_RS29390 () | 2892226..2892768 | - | 543 | WP_052122275.1 | lysozyme | - |
| BBU_RS29395 () | 2892761..2892973 | - | 213 | WP_025990444.1 | holin | - |
| BBU_RS38255 () | 2893017..2893733 | - | 717 | WP_076861665.1 | hypothetical protein | - |
| BBU_RS29400 () | 2894041..2897346 | - | 3306 | WP_041222698.1 | phage tail protein | - |
| BBU_RS29405 () | 2897343..2897927 | - | 585 | WP_004526680.1 | tail assembly protein | - |
| BBU_RS29410 () | 2897924..2898676 | - | 753 | WP_038723448.1 | C40 family peptidase | - |
| BBU_RS29415 () | 2898726..2899409 | - | 684 | WP_038725145.1 | phage minor tail protein L | - |
| BBU_RS29420 () | 2899406..2900794 | - | 1389 | WP_041222700.1 | tail fiber domain-containing protein | - |
| BBU_RS29425 () | 2900803..2901141 | - | 339 | WP_041222702.1 | phage tail protein | - |
| BBU_RS29430 () | 2901138..2905202 | - | 4065 | WP_041222704.1 | phage tail tape measure protein | - |
| BBU_RS29435 () | 2905216..2905500 | - | 285 | WP_004526674.1 | DUF4035 domain-containing protein | - |
| BBU_RS29440 () | 2905500..2905964 | - | 465 | WP_004548907.1 | tail assembly protein | - |
| BBU_RS29445 () | 2905991..2906446 | - | 456 | WP_004549350.1 | hypothetical protein | - |
| BBU_RS29450 () | 2906508..2906855 | - | 348 | WP_015984957.1 | hypothetical protein | - |
| BBU_RS29455 () | 2906852..2907274 | - | 423 | WP_024429290.1 | HK97 gp10 family phage protein | - |
| BBU_RS29460 () | 2907267..2907593 | - | 327 | WP_009910351.1 | phage head closure protein | - |
| BBU_RS29465 () | 2907593..2908159 | - | 567 | WP_009910350.1 | hypothetical protein | - |
| BBU_RS29470 () | 2908166..2908351 | - | 186 | WP_009910348.1 | hypothetical protein | - |
| BBU_RS29475 () | 2908411..2909718 | - | 1308 | WP_038796653.1 | phage major capsid protein | - |
| BBU_RS29480 () | 2909821..2910789 | - | 969 | WP_041197274.1 | S49 family peptidase | - |
| BBU_RS29485 () | 2910786..2912045 | - | 1260 | WP_038725164.1 | phage portal protein | - |
| BBU_RS29490 () | 2912049..2912234 | - | 186 | WP_038725166.1 | hypothetical protein | - |
| BBU_RS29495 () | 2912231..2913943 | - | 1713 | WP_038725169.1 | terminase large subunit | - |
| BBU_RS29500 () | 2913953..2914438 | - | 486 | WP_076861667.1 | phage terminase small subunit P27 family | - |
| BBU_RS29505 () | 2914586..2914942 | - | 357 | WP_004548856.1 | HNH endonuclease | - |
| BBU_RS38265 () | 2915001..2915258 | + | 258 | WP_004549735.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| BBU_RS29510 () | 2915255..2915641 | + | 387 | WP_004552941.1 | helix-turn-helix domain-containing protein | - |
| BBU_RS40090 () | 2915738..2915902 | - | 165 | WP_004549060.1 | hypothetical protein | - |
| BBU_RS29520 () | 2915899..2916183 | - | 285 | WP_011401115.1 | BrnA antitoxin family protein | Antitoxin Detail |
| BBU_RS29525 () | 2916167..2916388 | - | 222 | WP_038734759.1 | BrnT family toxin | Toxin Detail |
| BBU_RS29530 () | 2916487..2916930 | - | 444 | WP_038796648.1 | hypothetical protein | - |
| BBU_RS29535 () | 2916927..2917187 | - | 261 | WP_038725177.1 | hypothetical protein | - |
| BBU_RS29540 () | 2917498..2917923 | - | 426 | WP_004526654.1 | DUF1364 family protein | - |
| BBU_RS29545 () | 2917938..2918285 | - | 348 | WP_038738298.1 | DUF2591 family protein | - |
| BBU_RS29550 () | 2918474..2918959 | - | 486 | Protein_2378 | DUF1064 domain-containing protein | - |
| BBU_RS29555 () | 2918956..2919948 | - | 993 | WP_038757830.1 | hypothetical protein | - |
| BBU_RS29560 () | 2920102..2920362 | - | 261 | WP_004526650.1 | helix-turn-helix domain-containing protein | - |
| BBU_RS29565 () | 2920359..2921180 | - | 822 | WP_038757827.1 | hypothetical protein | - |
| BBU_RS29570 () | 2921215..2922177 | - | 963 | WP_038725186.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| BBU_RS29575 () | 2922174..2923175 | - | 1002 | WP_041222711.1 | site-specific DNA-methyltransferase | - |
| BBU_RS38280 () | 2923172..2924464 | - | 1293 | WP_122650738.1 | DNA cytosine methyltransferase | - |
| BBU_RS29585 () | 2924412..2924852 | - | 441 | WP_004549335.1 | phage regulatory CII family protein | - |
| BBU_RS29590 () | 2925038..2925292 | + | 255 | WP_021251775.1 | hypothetical protein | - |
| BBU_RS29595 () | 2925643..2925957 | - | 315 | WP_004552953.1 | helix-turn-helix domain-containing protein | - |
| BBU_RS41040 () | 2926201..2926422 | + | 222 | WP_004552954.1 | hypothetical protein | - |
| BBU_RS29610 () | 2926766..2928055 | - | 1290 | WP_004552955.1 | MFS transporter | - |
| BBU_RS29615 () | 2928210..2929103 | - | 894 | WP_004526641.1 | LysR family transcriptional regulator | - |
| BBU_RS29620 () | 2929605..2929880 | + | 276 | WP_004525419.1 | hypothetical protein | - |
| BBU_RS29625 () | 2929890..2930021 | + | 132 | WP_009923452.1 | bacteriophage protein Gp48 | - |
| BBU_RS29635 () | 2930157..2930378 | + | 222 | WP_004525418.1 | hypothetical protein | - |
| BBU_RS40685 () | 2930345..2930644 | + | 300 | WP_160973881.1 | hypothetical protein | - |
| BBU_RS38285 () | 2930830..2931483 | - | 654 | WP_041222714.1 | hypothetical protein | - |
| BBU_RS29650 () | 2931732..2931881 | + | 150 | WP_004537646.1 | bacteriophage protein Gp44 | - |
| BBU_RS29655 () | 2931878..2932690 | + | 813 | WP_041222716.1 | prohibitin family protein | - |
| BBU_RS29660 () | 2932964..2933671 | + | 708 | WP_041222718.1 | hypothetical protein | - |
| BBU_RS29665 () | 2933685..2934350 | + | 666 | WP_041222720.1 | hypothetical protein | - |
| BBU_RS29670 () | 2934611..2934829 | + | 219 | WP_080124839.1 | hypothetical protein | - |
| BBU_RS38295 () | 2934844..2935914 | + | 1071 | Protein_2401 | hypothetical protein | - |
| BBU_RS41045 () | 2936035..2936427 | + | 393 | Protein_2402 | hypothetical protein | - |
| BBU_RS29680 () | 2936424..2936681 | + | 258 | WP_004526632.1 | hypothetical protein | - |
| BBU_RS29685 () | 2936674..2936916 | + | 243 | WP_015973597.1 | hypothetical protein | - |
| BBU_RS38305 () | 2936906..2937244 | + | 339 | WP_076861670.1 | hypothetical protein | - |
| BBU_RS29690 () | 2937241..2938188 | + | 948 | WP_038723477.1 | phage Gp37/Gp68 family protein | - |
| BBU_RS29695 () | 2938179..2938421 | - | 243 | WP_038723479.1 | hypothetical protein | - |
| BBU_RS29700 () | 2938808..2939077 | - | 270 | WP_038723481.1 | hypothetical protein | - |
| BBU_RS29705 () | 2939077..2939320 | - | 244 | Protein_2409 | hypothetical protein | - |
| BBU_RS29710 () | 2939329..2939538 | - | 210 | WP_038767227.1 | hypothetical protein | - |
| BBU_RS29720 () | 2940179..2941376 | + | 1198 | Protein_2411 | Putative defective protein IntQ ; Integrase | Integrase |
| BBU_RS29730 () | 2941641..2943656 | - | 2016 | WP_004525415.1 | cation acetate symporter | - |
| BBU_RS29735 () | 2943650..2943970 | - | 321 | WP_004196029.1 | DUF4212 domain-containing protein | - |
| BBU_RS29740 () | 2944128..2946110 | - | 1983 | WP_004188376.1 | acetate--CoA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|