MGE detailed information
MGE type: Prophage MGE length: 17137 bp
Accession: NZ_CP004056 Location: 297790..314926 Organism: Shigella flexneri 2003036 isolate Human Replicon: chromosome
Accession: NZ_CP004056 Location: 297790..314926 Organism: Shigella flexneri 2003036 isolate Human Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SFY_RS01495 () | 293839..294360 | + | 522 | Protein_269 | C40 family peptidase | - |
| SFY_RS01500 () | 294536..295033 | + | 498 | WP_000006251.1 | REP-associated tyrosine transposase RayT | - |
| SFY_RS01505 () | 295250..296989 | - | 1740 | WP_005082921.1 | flagellar biosynthesis protein FlhA | - |
| SFY_RS01510 () | 296934..297719 | + | 786 | WP_000207560.1 | putative lateral flagellar export/assembly protein LafU | - |
| SFY_RS01515 () | 297790..298845 | + | 1056 | WP_001226172.1 | DNA polymerase IV | - |
| SFY_RS01520 () | 298897..299190 | + | 294 | WP_000554759.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| SFY_RS01525 () | 299193..299591 | + | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| SFY_RS01530 () | 299601..300053 | + | 453 | WP_001059860.1 | GNAT family N-acetyltransferase | - |
| SFY_RS01535 () | 300299..301342 | + | 1044 | WP_005053205.1 | RNA ligase RtcB family protein | - |
| SFY_RS01540 () | 301458..302018 | + | 561 | Protein_278 | peptide chain release factor H | - |
| SFY_RS01545 () | 302075..303532 | - | 1458 | WP_001293030.1 | cytosol nonspecific dipeptidase | - |
| SFY_RS01550 () | 303794..304252 | + | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| SFY_RS01555 () | 304344..305588 | + | 1245 | WP_000189558.1 | esterase FrsA | - |
| - () | 304848..304928 | + | 81 | NuclAT_8 | - | - |
| - () | 304848..304928 | + | 81 | NuclAT_8 | - | - |
| - () | 304848..304928 | + | 81 | NuclAT_8 | - | - |
| - () | 304848..304928 | + | 81 | NuclAT_8 | - | - |
| SFY_RS01560 () | 305646..306047 | + | 402 | WP_000174678.1 | sigma factor-binding protein Crl | - |
| SFY_RS01565 () | 306086..307141 | - | 1056 | WP_000749864.1 | phosphoporin PhoE | - |
| SFY_RS01575 () | 307317..308014 | + | 698 | Protein_284 | IS1 family transposase IS1X2 | Transposase |
| SFY_RS01580 () | 308205..309308 | + | 1104 | WP_001285281.1 | glutamate 5-kinase | - |
| SFY_RS01585 () | 309320..310573 | + | 1254 | WP_000893267.1 | glutamate-5-semialdehyde dehydrogenase | - |
| SFY_RS01595 () | 310778..311236 | - | 459 | Protein_287 | site-specific integrase | - |
| SFY_RS25095 () | 312451..313660 | - | 1210 | Protein_289 | IS3 family transposase IS629 | Transposase |
| SFY_RS01630 () | 313811..314926 | + | 1116 | WP_005053118.1 | diguanylate cyclase AdrA | - |
| SFY_RS01635 () | 314943..315752 | - | 810 | WP_001295331.1 | pyrroline-5-carboxylate reductase | - |
| SFY_RS01640 () | 315872..316330 | + | 459 | WP_000158164.1 | YaiI/YqxD family protein | - |
| SFY_RS01645 () | 316513..317037 | + | 525 | WP_000193385.1 | shikimate kinase AroL | - |
| SFY_RS01650 () | 317087..317278 | + | 192 | WP_001142439.1 | protein YaiA | - |
| SFY_RS01660 () | 317536..318213 | + | 678 | WP_001276420.1 | AroM family protein | - |
| SFY_RS01665 () | 318285..318569 | + | 285 | WP_000941942.1 | pyrimidine/purine nucleoside phosphorylase | - |
| SFY_RS01670 () | 318724..319059 | + | 336 | Protein_297 | DUF2773 domain-containing protein | - |
| SFY_RS01675 () | 319056..319511 | + | 456 | WP_000194195.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|