MGE detailed information
MGE type: Prophage MGE length: 21770 bp
Accession: NZ_CP004056 Location: 1587872..1609641 Organism: Shigella flexneri 2003036 isolate Human Replicon: chromosome
Accession: NZ_CP004056 Location: 1587872..1609641 Organism: Shigella flexneri 2003036 isolate Human Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SFY_RS08730 () | 1584534..1586180 | - | 1647 | WP_005050037.1 | medium-chain fatty-acid--CoA ligase | - |
| SFY_RS08735 () | 1586237..1586530 | - | 294 | WP_000081083.1 | ferredoxin family protein | - |
| SFY_RS08740 () | 1586527..1587816 | - | 1290 | WP_001278524.1 | FAD-dependent oxidoreductase | - |
| SFY_RS08745 () | 1587872..1588810 | - | 939 | WP_000080702.1 | electron transfer flavoprotein subunit alpha | - |
| SFY_RS08750 () | 1588830..1589594 | - | 765 | WP_000692136.1 | electron transfer flavoprotein | - |
| SFY_RS08760 () | 1589913..1590413 | + | 501 | WP_000284805.1 | cupin domain-containing protein | - |
| SFY_RS08765 () | 1590447..1591144 | + | 698 | Protein_1587 | IS1 family transposase IS1X2 | Transposase |
| SFY_RS24795 () | 1591138..1591305 | - | 168 | WP_005062520.1 | hypothetical protein | - |
| SFY_RS08775 () | 1591707..1592468 | - | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| SFY_RS08780 () | 1592536..1592739 | - | 204 | WP_000543395.1 | two-component system connector SafA | - |
| SFY_RS08785 () | 1592987..1595266 | - | 2280 | WP_000726666.1 | acid resistance putative oxidoreductase YdeP | - |
| SFY_RS08790 () | 1595600..1596349 | - | 750 | Protein_1592 | Type 1 fimbrin D-mannose specific adhesin | VF |
| SFY_RS08795 () | 1596405..1597101 | + | 697 | Protein_1593 | IS1 family transposase IS1X2 | Transposase |
| SFY_RS08800 () | 1597119..1597997 | + | 879 | Protein_1594 | IS3 family transposase IS600 | Transposase |
| SFY_RS08805 () | 1598022..1598201 | - | 180 | WP_000372594.1 | class II holin family protein | - |
| SFY_RS29300 () | 1598351..1598512 | - | 162 | WP_001323614.1 | hypothetical protein | - |
| SFY_RS08810 () | 1598509..1598697 | - | 189 | WP_000874243.1 | DUF1737 domain-containing protein | - |
| SFY_RS08815 () | 1598957..1599292 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| SFY_RS28755 () | 1599573..1599704 | - | 132 | Protein_1599 | DUF3927 family protein | - |
| SFY_RS08840 () | 1600602..1601423 | - | 822 | WP_000762882.1 | antitermination protein | - |
| SFY_RS08845 () | 1601438..1601794 | - | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| SFY_RS08850 () | 1601807..1602856 | - | 1050 | WP_001265249.1 | DUF968 domain-containing protein | - |
| SFY_RS08855 () | 1602858..1603136 | - | 279 | Protein_1603 | hypothetical protein | - |
| SFY_RS08860 () | 1603203..1603454 | - | 252 | WP_000980987.1 | hypothetical protein | - |
| SFY_RS08865 () | 1603672..1603827 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| SFY_RS08870 () | 1603899..1604186 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| SFY_RS08875 () | 1604186..1604425 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| SFY_RS25795 () | 1604450..1604755 | + | 306 | WP_071818640.1 | hypothetical protein | - |
| SFY_RS08890 () | 1605970..1606989 | + | 1020 | Protein_1610 | MFS transporter | - |
| SFY_RS08895 () | 1607078..1608538 | + | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| SFY_RS08900 () | 1608574..1608777 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| SFY_RS08905 () | 1608955..1609641 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| SFY_RS08910 () | 1609730..1610476 | - | 747 | WP_005050098.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| SFY_RS08915 () | 1610613..1612658 | + | 2046 | WP_005068122.1 | peptidyl-dipeptidase Dcp | - |
| SFY_RS08920 () | 1612703..1613221 | - | 519 | WP_001024558.1 | 2-oxo-tetronate isomerase | - |
| SFY_RS08925 () | 1613497..1613721 | + | 225 | Protein_1617 | YdeI family stress tolerance OB fold protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|