MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 86163 bp
Accession: NZ_CP002007 Location: 1217453..1303615 Organism: Streptococcus suis 05HAS68 Replicon: chromosome
Accession: NZ_CP002007 Location: 1217453..1303615 Organism: Streptococcus suis 05HAS68 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HAS68_RS06125 () | 1212663..1212953 | + | 291 | WP_024409338.1 | hypothetical protein | - |
| HAS68_RS06130 () | 1213064..1213702 | + | 639 | WP_024409337.1 | hypothetical protein | - |
| HAS68_RS06135 () | 1213742..1214830 | + | 1089 | WP_024409336.1 | toprim domain-containing protein | - |
| HAS68_RS06140 () | 1214884..1215111 | + | 228 | WP_024409335.1 | hypothetical protein | - |
| HAS68_RS06145 () | 1215115..1215510 | + | 396 | WP_017285409.1 | hypothetical protein | - |
| HAS68_RS06150 () | 1215554..1215838 | + | 285 | WP_024409334.1 | hypothetical protein | - |
| HAS68_RS06155 () | 1215908..1216384 | + | 477 | WP_024409333.1 | helix-turn-helix domain-containing protein | - |
| HAS68_RS06160 () | 1216384..1217178 | + | 795 | WP_024409332.1 | zeta toxin family protein | - |
| HAS68_RS06165 () | 1217159..1217362 | + | 204 | Protein_1169 | AAA family ATPase | - |
| HAS68_RS06170 () | 1217453..1218397 | + | 945 | WP_024409330.1 | IS30 family transposase IS1252 | Transposase |
| HAS68_RS06175 () | 1218405..1220228 | + | 1824 | Protein_1171 | AAA family ATPase | - |
| HAS68_RS06180 () | 1220225..1222150 | + | 1926 | WP_024409328.1 | ATP-dependent helicase | - |
| HAS68_RS06185 () | 1222191..1222781 | + | 591 | WP_024409327.1 | hypothetical protein | - |
| HAS68_RS06190 () | 1223107..1223466 | + | 360 | WP_024409326.1 | hypothetical protein | - |
| HAS68_RS06195 () | 1223476..1223841 | + | 366 | WP_024409325.1 | MobC family plasmid mobilization relaxosome protein | - |
| HAS68_RS06200 () | 1223828..1225693 | + | 1866 | WP_025310409.1 | relaxase/mobilization nuclease domain-containing protein | - |
| HAS68_RS06205 () | 1225737..1226403 | - | 667 | Protein_1177 | HAD family hydrolase | - |
| HAS68_RS06210 () | 1226412..1227173 | - | 762 | WP_024409323.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| HAS68_RS06215 () | 1227353..1228303 | + | 951 | WP_024409322.1 | ROK family glucokinase | - |
| HAS68_RS06220 () | 1228541..1228966 | + | 426 | WP_003084983.1 | galactose-6-phosphate isomerase subunit LacA | - |
| HAS68_RS06225 () | 1229000..1229515 | + | 516 | WP_002936382.1 | galactose-6-phosphate isomerase subunit LacB | - |
| HAS68_RS06230 () | 1229527..1230459 | + | 933 | WP_024409321.1 | tagatose-6-phosphate kinase | - |
| HAS68_RS06235 () | 1230462..1231442 | + | 981 | WP_029743106.1 | tagatose-bisphosphate aldolase | - |
| HAS68_RS06240 () | 1231470..1231787 | + | 318 | WP_024409319.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| HAS68_RS06245 () | 1231787..1233490 | + | 1704 | WP_024409318.1 | lactose-specific PTS transporter subunit EIIC | - |
| HAS68_RS06250 () | 1233556..1234962 | + | 1407 | WP_024409317.1 | 6-phospho-beta-galactosidase | - |
| HAS68_RS06255 () | 1235050..1235946 | + | 897 | WP_024409316.1 | aldose 1-epimerase family protein | - |
| HAS68_RS06260 () | 1236193..1236417 | + | 225 | WP_003108992.1 | helix-turn-helix domain-containing protein | - |
| HAS68_RS06265 () | 1236687..1236935 | + | 249 | WP_029743105.1 | DUF3173 family protein | - |
| HAS68_RS06270 () | 1236938..1238143 | + | 1206 | WP_024409315.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| HAS68_RS06275 () | 1238404..1239363 | + | 960 | WP_024383747.1 | hypothetical protein | - |
| HAS68_RS06280 () | 1239360..1241954 | + | 2595 | WP_025310408.1 | G5 domain-containing protein | - |
| HAS68_RS06285 () | 1241947..1242441 | + | 495 | WP_024383745.1 | PcfB family protein | - |
| HAS68_RS06290 () | 1242453..1244240 | + | 1788 | WP_029693403.1 | type IV secretory system conjugative DNA transfer family protein | - |
| HAS68_RS06295 () | 1244316..1244624 | + | 309 | WP_024383743.1 | single-stranded DNA-binding protein | - |
| HAS68_RS06300 () | 1244624..1244839 | + | 216 | WP_014637003.1 | Maff2 family protein | - |
| HAS68_RS06305 () | 1244848..1245711 | + | 864 | WP_024383742.1 | hypothetical protein | - |
| HAS68_RS06310 () | 1245724..1246092 | + | 369 | WP_024383741.1 | PrgI family protein | - |
| HAS68_RS06315 () | 1246049..1248478 | + | 2430 | WP_025310407.1 | ATP-binding protein | - |
| HAS68_RS11620 () | 1250469..1251707 | + | 1239 | WP_170241740.1 | CHAP domain-containing protein | - |
| HAS68_RS06325 () | 1251718..1251933 | + | 216 | WP_024377527.1 | hypothetical protein | - |
| HAS68_RS06330 () | 1251917..1252513 | + | 597 | WP_050571927.1 | DUF4366 domain-containing protein | - |
| HAS68_RS06335 () | 1252556..1253194 | + | 639 | WP_024383738.1 | DUF3990 domain-containing protein | - |
| HAS68_RS06340 () | 1253179..1253409 | + | 231 | WP_024377524.1 | hypothetical protein | - |
| HAS68_RS06345 () | 1253486..1254670 | + | 1185 | WP_038425701.1 | DNA (cytosine-5-)-methyltransferase | - |
| HAS68_RS06350 () | 1254667..1255626 | + | 960 | WP_024406079.1 | DNA cytosine methyltransferase | - |
| HAS68_RS06355 () | 1255704..1256075 | + | 372 | WP_050571928.1 | hypothetical protein | - |
| HAS68_RS06360 () | 1256094..1263365 | + | 7272 | WP_024406080.1 | DEAD/DEAH box helicase family protein | - |
| HAS68_RS06365 () | 1263362..1264000 | + | 639 | WP_024383732.1 | single-stranded DNA-binding protein | - |
| HAS68_RS06370 () | 1264047..1264340 | - | 294 | WP_024383731.1 | hypothetical protein | - |
| HAS68_RS06375 () | 1264327..1264677 | - | 351 | WP_024383730.1 | hypothetical protein | - |
| HAS68_RS06380 () | 1264674..1266089 | - | 1416 | WP_024383729.1 | Y-family DNA polymerase | - |
| HAS68_RS06385 () | 1266232..1266924 | - | 693 | WP_024383728.1 | XRE family transcriptional regulator | - |
| HAS68_RS06390 () | 1267089..1267586 | + | 498 | WP_024383727.1 | hypothetical protein | - |
| HAS68_RS06395 () | 1267589..1268884 | - | 1296 | WP_024383726.1 | relaxase/mobilization nuclease domain-containing protein | - |
| HAS68_RS06400 () | 1268886..1269239 | - | 354 | WP_024383725.1 | plasmid mobilization relaxosome protein MobC | - |
| HAS68_RS06405 () | 1269413..1270183 | - | 771 | WP_029693397.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| HAS68_RS06410 () | 1270342..1271769 | + | 1428 | WP_014638951.1 | rhamnulokinase | - |
| HAS68_RS06415 () | 1271753..1273540 | + | 1788 | WP_024406081.1 | L-fucose isomerase | - |
| HAS68_RS06420 () | 1273561..1274199 | + | 639 | WP_024383723.1 | L-fuculose-phosphate aldolase | - |
| HAS68_RS06425 () | 1274216..1275514 | + | 1299 | WP_004195663.1 | ABC transporter substrate-binding protein | - |
| HAS68_RS06430 () | 1275569..1276489 | + | 921 | WP_004195666.1 | sugar ABC transporter permease | - |
| HAS68_RS06435 () | 1276500..1277339 | + | 840 | WP_004195668.1 | carbohydrate ABC transporter permease | - |
| HAS68_RS06440 () | 1277336..1278670 | + | 1335 | WP_024406082.1 | alpha-L-fucosidase | - |
| HAS68_RS06445 () | 1278660..1280537 | + | 1878 | WP_024406083.1 | alpha-N-acetylgalactosaminidase | - |
| HAS68_RS06450 () | 1280539..1281432 | + | 894 | WP_024406084.1 | ROK family protein | - |
| HAS68_RS06455 () | 1281575..1284514 | + | 2940 | WP_024383720.1 | NPCBM/NEW2 domain-containing protein | - |
| HAS68_RS06460 () | 1284722..1285138 | + | 417 | WP_024383719.1 | hypothetical protein | VF |
| HAS68_RS06465 () | 1285474..1285722 | + | 249 | WP_024377501.1 | DUF3173 family protein | - |
| HAS68_RS06470 () | 1285715..1286914 | + | 1200 | WP_047020680.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| HAS68_RS06475 () | 1287109..1287858 | + | 750 | WP_002935039.1 | HAD family hydrolase | - |
| HAS68_RS06480 () | 1288054..1289388 | + | 1335 | WP_002935038.1 | methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO | - |
| HAS68_RS06485 () | 1289465..1290301 | + | 837 | WP_002935037.1 | AraC family transcriptional regulator | - |
| HAS68_RS06490 () | 1290366..1291370 | + | 1005 | WP_002935036.1 | winged helix DNA-binding domain-containing protein | - |
| HAS68_RS06495 () | 1291484..1292311 | + | 828 | WP_002935033.1 | alpha/beta hydrolase | - |
| HAS68_RS06500 () | 1292342..1293088 | + | 747 | WP_002935029.1 | esterase family protein | - |
| HAS68_RS06505 () | 1293107..1294273 | + | 1167 | WP_002935028.1 | carbamoyl phosphate synthase large subunit | - |
| HAS68_RS11590 () | 1294412..1294549 | + | 138 | WP_002935027.1 | hypothetical protein | - |
| HAS68_RS06510 () | 1294562..1295296 | + | 735 | WP_002935025.1 | beta-carotene 15,15'-monooxygenase | - |
| HAS68_RS11595 () | 1295395..1295535 | + | 141 | WP_002935023.1 | hypothetical protein | - |
| HAS68_RS06520 () | 1295548..1295931 | + | 384 | WP_002935021.1 | NisI/SpaI family lantibiotic immunity lipoprotein | - |
| HAS68_RS06525 () | 1295948..1296700 | + | 753 | WP_002935019.1 | ABC transporter ATP-binding protein YxdL | VF |
| HAS68_RS06530 () | 1296701..1298671 | + | 1971 | WP_013730363.1 | FtsX-like permease family protein | - |
| HAS68_RS06535 () | 1298763..1299002 | + | 240 | WP_002935014.1 | hypothetical protein | Antitoxin Detail |
| HAS68_RS06540 () | 1298992..1299249 | + | 258 | WP_002935012.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| HAS68_RS06545 () | 1299288..1299953 | + | 666 | WP_009909826.1 | Response regulator protein GraR | VF |
| HAS68_RS06550 () | 1299950..1300891 | + | 942 | WP_002935009.1 | sensor histidine kinase | - |
| HAS68_RS06555 () | 1300967..1302475 | + | 1509 | WP_013730362.1 | Phosphomannomutase/phosphoglucomutase | VF |
| HAS68_RS06560 () | 1302545..1303615 | - | 1071 | WP_002935006.1 | Tyrosine recombinase XerS ; Integrase | Integrase |
| HAS68_RS06565 () | 1303782..1304303 | - | 522 | WP_002935005.1 | AAA family ATPase | - |
| HAS68_RS06570 () | 1304369..1305109 | - | 741 | WP_009909823.1 | DUF3307 domain-containing protein | - |
| HAS68_RS06575 () | 1305113..1305781 | - | 669 | WP_002935003.1 | SatD family protein | - |
| HAS68_RS06580 () | 1305975..1307549 | - | 1575 | WP_002935002.1 | signal recognition particle protein | - |
| HAS68_RS06585 () | 1307562..1307894 | - | 333 | WP_002935001.1 | putative DNA-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|