MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 154111 bp
Accession: NZ_AP028128        Location: 2593479..2747589         Organism: Vibrio fluvialis strain IDH05335       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QUF32_RS12220 (KKIDH5335_23390) 2590216..2590950 - 735 WP_143683205.1 peptidoglycan editing factor PgeF -
QUF32_RS12225 (KKIDH5335_23400) 2590954..2591928 - 975 WP_020332116.1 23S rRNA pseudouridine(1911/1915/1917) synthase RluD -
QUF32_RS12230 (KKIDH5335_23410) 2592084..2592809 + 726 WP_020332115.1 outer membrane protein assembly factor BamD -
QUF32_RS12235 (KKIDH5335_23420) 2592932..2594377 + 1446 WP_185961688.1 lytic transglycosylase F -
QUF32_RS12240 (KKIDH5335_23430) 2594672..2595001 + 330 WP_020430586.1 ribosome-associated translation inhibitor RaiA -
QUF32_RS12245 (KKIDH5335_23440) 2595245..2596426 + 1182 WP_143683204.1 prephenate dehydratase -
QUF32_RS12250 (KKIDH5335_23450) 2596598..2597644 + 1047 WP_020430582.1 spermidine/putrescine ABC transporter substrate-binding protein -
QUF32_RS12255 (KKIDH5335_23460) 2597628..2599976 + 2349 WP_143683203.1 EAL domain-containing protein -
QUF32_RS12260 (KKIDH5335_23470) 2599948..2600475 + 528 WP_044364001.1 inosine/xanthosine triphosphatase -
QUF32_RS12265 (KKIDH5335_23480) 2600527..2600820 - 294 WP_206752505.1 trp operon repressor -
QUF32_RS12270 (KKIDH5335_23490) 2600876..2602822 - 1947 WP_020430578.1 murein transglycosylase -
QUF32_RS12275 (KKIDH5335_23500) 2603080..2604747 + 1668 WP_020332105.1 energy-dependent translational throttle protein EttA -
QUF32_RS12280 (KKIDH5335_23510) 2604882..2605259 + 378 WP_020332104.1 PilZ domain-containing protein -
QUF32_RS12285 (KKIDH5335_23520) 2605311..2606438 - 1128 WP_020430575.1 T-protein VF
QUF32_RS12290 (KKIDH5335_23530) 2606453..2607526 - 1074 WP_047461292.1 3-deoxy-7-phosphoheptulonate synthase -
QUF32_RS12295 (KKIDH5335_23540) 2607847..2609523 + 1677 WP_024373699.1 Sensor histidine kinase BtsS VF
QUF32_RS12300 (KKIDH5335_23550) 2609523..2610239 + 717 WP_020332100.1 two-component system response regulator BtsR -
QUF32_RS12305 (KKIDH5335_23560) 2610300..2611289 - 990 WP_143683201.1 beta-N-acetylhexosaminidase -
QUF32_RS12310 (KKIDH5335_23570) 2611426..2612538 + 1113 WP_143683200.1 anhydro-N-acetylmuramic acid kinase -
QUF32_RS12315 (KKIDH5335_23580) 2612582..2613514 + 933 WP_020430567.1 N-acetylmuramic acid 6-phosphate etherase -
QUF32_RS12320 (KKIDH5335_23590) 2613511..2615310 - 1800 WP_024373696.1 sodium:proton antiporter -
QUF32_RS12325 (KKIDH5335_23600) 2615333..2615674 - 342 WP_100268282.1 DUF2799 domain-containing protein -
QUF32_RS12330 (KKIDH5335_23610) 2615914..2617398 + 1485 WP_020332093.1 carbon starvation protein A -
QUF32_RS12335 2617508..2618712 + 1205 WP_286236231.1 IS3 family transposase ISVisp4 Transposase
QUF32_RS12340 (KKIDH5335_23640) 2618799..2619761 - 963 WP_286236232.1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase -
QUF32_RS12345 (KKIDH5335_23650) 2619795..2620241 - 447 WP_020430561.1 FKBP-type peptidyl-prolyl cis-trans isomerase -
QUF32_RS12350 (KKIDH5335_23670) 2620408..2620914 - 507 WP_020332090.1 Lipoprotein signal peptidase VF
QUF32_RS12355 (KKIDH5335_23680) 2620924..2623770 - 2847 WP_143683199.1 isoleucine--tRNA ligase -
QUF32_RS12360 (KKIDH5335_23690) 2623834..2624769 - 936 WP_020430559.1 bifunctional riboflavin kinase/FAD synthetase -
QUF32_RS12365 (KKIDH5335_23700) 2624841..2626403 - 1563 WP_185961687.1 murein biosynthesis integral membrane protein MurJ -
QUF32_RS12370 (KKIDH5335_23710) 2626662..2626922 + 261 WP_004728884.1 30S ribosomal protein S20 -
QUF32_RS12375 (KKIDH5335_23720) 2627077..2627373 - 297 WP_038129795.1 metalloregulator ArsR/SmtB family transcription factor -
QUF32_RS12380 (KKIDH5335_23730) 2627631..2628521 - 891 WP_020332086.1 Transcriptional activator protein NhaR VF
QUF32_RS12385 (KKIDH5335_23740) 2628918..2630066 + 1149 WP_143683198.1 Na/Pi symporter -
QUF32_RS12390 (KKIDH5335_23750) 2630163..2631014 - 852 WP_020430554.1 thymidylate synthase -
QUF32_RS12395 (KKIDH5335_23760) 2631024..2631839 - 816 WP_020332082.1 prolipoprotein diacylglyceryl transferase -
QUF32_RS12400 (KKIDH5335_23770) 2631871..2632665 - 795 WP_143683197.1 sulfite exporter TauE/SafE family protein -
QUF32_RS12405 (KKIDH5335_23780) 2632675..2634921 - 2247 WP_143683196.1 phosphoenolpyruvate--protein phosphotransferase -
QUF32_RS12410 (KKIDH5335_23790) 2634924..2635442 - 519 WP_020332079.1 RNA pyrophosphohydrolase -
QUF32_RS12415 (KKIDH5335_23800) 2636061..2636726 + 666 WP_061056180.1 DNA mismatch repair endonuclease MutH -
QUF32_RS12420 (KKIDH5335_23810) 2636744..2637049 - 306 WP_286236233.1 DUF6482 family protein -
QUF32_RS12425 (KKIDH5335_23820) 2637241..2638275 + 1035 WP_020430547.1 NADP(H)-dependent aldo-keto reductase -
QUF32_RS12430 (KKIDH5335_23830) 2638315..2638566 - 252 WP_020332074.1 hypothetical protein -
QUF32_RS12435 (KKIDH5335_23840) 2639086..2640420 - 1335 WP_143683195.1 Transcriptional regulatory protein ZraR VF
QUF32_RS12440 (KKIDH5335_23850) 2640689..2642221 - 1533 WP_020332071.1 lysine--tRNA ligase -
QUF32_RS12450 (KKIDH5335_23870) 2643527..2644840 - 1314 WP_020332069.1 branched-chain amino acid transport system II carrier protein -
QUF32_RS12455 (KKIDH5335_23880) 2645148..2645867 + 720 WP_143683194.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
QUF32_RS12460 (KKIDH5335_23890) 2645959..2647206 + 1248 WP_020332066.1 ATP-dependent RNA helicase SrmB -
QUF32_RS12465 (KKIDH5335_23900) 2647305..2648894 - 1590 WP_286236234.1 Peptide chain release factor RF3 VF
QUF32_RS12470 (KKIDH5335_23910) 2649151..2649798 - 648 WP_000854920.1 LexA family transcriptional regulator -
QUF32_RS12475 (KKIDH5335_23920) 2649916..2650167 + 252 WP_000451746.1 helix-turn-helix domain-containing protein -
QUF32_RS12480 (KKIDH5335_23930) 2650223..2651092 + 870 WP_001205850.1 hypothetical protein -
QUF32_RS12485 (KKIDH5335_23940) 2651079..2651741 + 663 WP_286236235.1 DUF6475 domain-containing protein -
QUF32_RS12490 (KKIDH5335_23950) 2651728..2652276 + 549 WP_286236236.1 lytic transglycosylase domain-containing protein -
QUF32_RS12495 (KKIDH5335_23960) 2652273..2652572 + 300 WP_000210564.1 flagellar transcriptional regulator FlhD -
QUF32_RS12500 (KKIDH5335_23970) 2652569..2653102 + 534 WP_000566755.1 FlhC family transcriptional regulator -
QUF32_RS12505 (KKIDH5335_23980) 2653160..2653591 + 432 WP_286236237.1 entry exclusion protein EexR -
QUF32_RS12510 (KKIDH5335_23990) 2653624..2657193 - 3570 WP_286236238.1 conjugal transfer protein TraG N-terminal domain-containing protein -
QUF32_RS12515 (KKIDH5335_24000) 2657197..2658585 - 1389 WP_000755290.1 conjugal transfer protein TraH -
QUF32_RS12520 (KKIDH5335_24010) 2658588..2659532 - 945 WP_125891652.1 thioredoxin family protein -
QUF32_RS12525 (KKIDH5335_24020) 2659836..2660597 + 762 WP_011789342.1 IS5 family transposase ISSpu10 Transposase
QUF32_RS12530 (KKIDH5335_24040) 2661044..2662081 - 1038 WP_153827384.1 IS110 family transposase ISCro5 Transposase
QUF32_RS12535 2662277..2662477 + 201 Protein_2399 AI-2E family transporter -
QUF32_RS12540 (KKIDH5335_24050) 2662598..2663140 - 543 WP_125891653.1 TetR/AcrR family transcriptional regulator -
QUF32_RS12545 (KKIDH5335_24060) 2663277..2664416 + 1140 WP_125891654.1 Multidrug export protein AcrE VF
QUF32_RS12550 (KKIDH5335_24070) 2664445..2666031 + 1587 WP_286236240.1 Multidrug efflux pump subunit AcrB VF
QUF32_RS12555 2666072..2667276 + 1205 WP_286236231.1 IS3 family transposase ISVisp4 Transposase
QUF32_RS12560 (KKIDH5335_24100) 2667283..2668875 + 1593 WP_286236241.1 Multidrug resistance protein MexB VF
QUF32_RS12565 (KKIDH5335_24110) 2668875..2670290 + 1416 WP_170919401.1 Outer membrane protein OprJ VF
QUF32_RS12570 2670565..2670723 + 159 Protein_2406 GDCCVxC domain-containing (seleno)protein -
QUF32_RS12575 (KKIDH5335_24120) 2670878..2671297 - 420 WP_046519886.1 hypothetical protein -
QUF32_RS12580 (KKIDH5335_24130) 2671390..2672181 - 792 WP_125891656.1 alpha/beta hydrolase -
QUF32_RS12585 (KKIDH5335_24140) 2672292..2672624 - 333 WP_055647263.1 multidrug efflux SMR transporter -
QUF32_RS12590 (KKIDH5335_24150) 2673041..2673748 - 708 WP_011788520.1 hypothetical protein -
QUF32_RS12595 (KKIDH5335_24160) 2673838..2674911 - 1074 WP_286236243.1 primase-helicase zinc-binding domain-containing protein -
QUF32_RS12600 (KKIDH5335_24170) 2675003..2675344 - 342 WP_054103815.1 hypothetical protein -
QUF32_RS12605 (KKIDH5335_24180) 2675344..2675841 - 498 WP_000791199.1 DNA repair protein RadC -
QUF32_RS12610 (KKIDH5335_24190) 2675927..2677582 - 1656 WP_054103814.1 VWA domain-containing protein -
QUF32_RS12615 (KKIDH5335_24200) 2677652..2678092 - 441 WP_054103813.1 hypothetical protein -
QUF32_RS12620 (KKIDH5335_24210) 2678154..2679107 - 954 WP_054103812.1 DUF3150 domain-containing protein -
QUF32_RS12625 (KKIDH5335_24220) 2679206..2679973 - 768 WP_054103811.1 hypothetical protein -
QUF32_RS12630 (KKIDH5335_24230) 2679973..2680932 - 960 WP_000139695.1 CbbQ/NirQ/NorQ C-terminal domain-containing protein -
QUF32_RS12635 (KKIDH5335_24240) 2681142..2682158 - 1017 WP_000862954.1 YqaJ viral recombinase family protein -
QUF32_RS12640 2682219..2682362 - 144 WP_000167276.1 hypothetical protein -
QUF32_RS12645 (KKIDH5335_24250) 2682444..2683262 - 819 WP_000414662.1 phage recombination protein Bet -
QUF32_RS12650 (KKIDH5335_24260) 2683342..2683761 - 420 WP_000795984.1 single-stranded DNA-binding protein -
QUF32_RS12655 (KKIDH5335_24270) 2683777..2684103 - 327 WP_000455722.1 hypothetical protein -
QUF32_RS12660 (KKIDH5335_24280) 2684471..2685073 + 603 WP_000035788.1 hypothetical protein -
QUF32_RS12665 (KKIDH5335_24290) 2685164..2685826 - 663 WP_000342215.1 hypothetical protein -
QUF32_RS12670 (KKIDH5335_24300) 2685857..2686189 - 333 WP_001132435.1 hypothetical protein -
QUF32_RS12675 (KKIDH5335_24310) 2686421..2690113 - 3693 WP_000805220.1 conjugal transfer protein TraN -
QUF32_RS12680 (KKIDH5335_24320) 2690116..2691144 - 1029 WP_000735888.1 TraU family protein -
QUF32_RS12685 (KKIDH5335_24330) 2691128..2692252 - 1125 WP_001253262.1 TrbC family F-type conjugative pilus assembly protein -
QUF32_RS12690 (KKIDH5335_24340) 2692263..2692775 - 513 WP_002040537.1 S26 family signal peptidase -
QUF32_RS12695 (KKIDH5335_24350) 2692759..2693106 - 348 WP_001044649.1 hypothetical protein -
QUF32_RS12700 (KKIDH5335_24360) 2693099..2695498 - 2400 WP_286236244.1 type IV secretion system protein TraC -
QUF32_RS12705 (KKIDH5335_24370) 2695498..2696190 - 693 WP_286236245.1 DsbC family protein -
QUF32_RS12710 (KKIDH5335_24380) 2696322..2697260 - 939 WP_000356587.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein Toxin Detail
QUF32_RS12715 (KKIDH5335_24390) 2697253..2698044 - 792 WP_000095577.1 type IV toxin-antitoxin system AbiEi family antitoxin Antitoxin Detail
QUF32_RS12720 (KKIDH5335_24400) 2698265..2698651 - 387 WP_000180225.1 TraA family conjugative transfer protein -
QUF32_RS12725 2698648..2699220 - 573 WP_148039504.1 type IV conjugative transfer system lipoprotein TraV -
QUF32_RS12730 (KKIDH5335_24410) 2699295..2700584 - 1290 WP_206989652.1 TraB/VirB10 family protein -
QUF32_RS12735 (KKIDH5335_24420) 2700587..2701483 - 897 WP_286236290.1 type-F conjugative transfer system secretin TraK -
QUF32_RS12740 (KKIDH5335_24430) 2701467..2702093 - 627 WP_064497042.1 TraE/TraK family type IV conjugative transfer system protein -
QUF32_RS12745 (KKIDH5335_24440) 2702090..2702371 - 282 WP_000433891.1 type IV conjugative transfer system protein TraL -
QUF32_RS12750 (KKIDH5335_24450) 2702552..2702875 + 324 WP_054103799.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
QUF32_RS12755 (KKIDH5335_24460) 2702872..2703150 + 279 WP_000058216.1 helix-turn-helix transcriptional regulator Antitoxin Detail
QUF32_RS12760 (KKIDH5335_24470) 2703176..2703811 - 636 WP_000033757.1 DUF4400 domain-containing protein -
QUF32_RS12765 (KKIDH5335_24480) 2703798..2704358 - 561 WP_286236246.1 conjugative transfer protein -
QUF32_RS12770 (KKIDH5335_24490) 2704368..2706188 - 1821 WP_286236247.1 conjugative transfer system coupling protein TraD -
QUF32_RS12775 (KKIDH5335_24500) 2706236..2708386 - 2151 WP_286236248.1 MobH family relaxase -
QUF32_RS12780 (KKIDH5335_24510) 2708543..2708833 - 291 WP_286236249.1 hypothetical protein -
QUF32_RS12785 (KKIDH5335_24520) 2708930..2711581 - 2652 WP_064497049.1 DEAD/DEAH box helicase family protein -
QUF32_RS12790 (KKIDH5335_24530) 2711583..2713418 - 1836 WP_064497050.1 site-specific DNA-methyltransferase -
QUF32_RS12795 (KKIDH5335_24540) 2713499..2714452 - 954 WP_064497051.1 WYL domain-containing protein -
QUF32_RS12800 (KKIDH5335_24550) 2714770..2715069 - 300 WP_142610883.1 hypothetical protein -
QUF32_RS12805 (KKIDH5335_24560) 2715157..2716062 - 906 WP_000196208.1 3'-5' exonuclease -
QUF32_RS12810 (KKIDH5335_24570) 2716445..2716702 - 258 WP_000182836.1 hypothetical protein -
QUF32_RS12815 (KKIDH5335_24580) 2716701..2717150 + 450 WP_000116661.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
QUF32_RS12820 (KKIDH5335_24590) 2717158..2717427 + 270 WP_001883756.1 hypothetical protein -
QUF32_RS12825 (KKIDH5335_24600) 2718078..2719385 - 1308 Protein_2457 Tn3 family transposase TnpA_ISShfr9 Transposase
QUF32_RS12830 (KKIDH5335_24610) 2719499..2720092 - 594 WP_000107352.1 Tn3 family transposase TnpA_IS3000 Transposase
QUF32_RS12835 (KKIDH5335_24620) 2720376..2721548 + 1173 WP_001142610.1 translesion error-prone DNA polymerase V subunit UmuC -
QUF32_RS12840 (KKIDH5335_24630) 2721559..2722002 - 444 WP_000348524.1 conjugative transfer protein MobI(A/C) -
QUF32_RS12845 (KKIDH5335_24640) 2722467..2723441 + 975 WP_000497807.1 ParM/StbA family protein -
QUF32_RS12850 (KKIDH5335_24650) 2723444..2723713 + 270 WP_001995600.1 hypothetical protein -
QUF32_RS12855 (KKIDH5335_24660) 2723715..2724956 + 1242 WP_001218618.1 Prophage integrase IntS ; Integrase Integrase
QUF32_RS12860 (KKIDH5335_24670) 2725086..2727104 - 2019 WP_000211147.1 ATP-binding protein -
QUF32_RS12865 (KKIDH5335_24680) 2727250..2727438 - 189 WP_000127615.1 hypothetical protein -
QUF32_RS12870 2727877..2727969 - 93 WP_080728425.1 peptide chain release factor 3 -
QUF32_RS12875 (KKIDH5335_24690) 2728178..2730235 + 2058 WP_143683193.1 putative signaling protein VF
QUF32_RS12880 (KKIDH5335_24700) 2730236..2730682 - 447 WP_143683192.1 Ribosomal-protein-alanine acetyltransferase VF
QUF32_RS12885 (KKIDH5335_24710) 2730682..2731089 - 408 WP_143683191.1 DNA polymerase III subunit psi -
QUF32_RS12890 (KKIDH5335_24720) 2731230..2731736 - 507 WP_024374251.1 N-acetyltransferase -
QUF32_RS12895 (KKIDH5335_24730) 2731720..2732247 - 528 WP_024374250.1 SCP2 domain-containing protein -
QUF32_RS12900 (KKIDH5335_24740) 2732456..2734501 + 2046 WP_143683190.1 putative signaling protein VF
QUF32_RS12905 (KKIDH5335_24750) 2734609..2735622 + 1014 WP_024374248.1 peptidase U32 family protein -
QUF32_RS12910 (KKIDH5335_24760) 2735640..2736518 + 879 WP_061056172.1 U32 family peptidase -
QUF32_RS12915 (KKIDH5335_24770) 2736573..2737907 - 1335 WP_143683189.1 MATE family efflux transporter -
QUF32_RS12920 (KKIDH5335_24780) 2737959..2738369 - 411 WP_143683188.1 MarR family transcriptional regulator -
QUF32_RS12925 (KKIDH5335_24790) 2738495..2739403 - 909 WP_020332052.1 lipoprotein NlpI -
QUF32_RS12930 (KKIDH5335_24800) 2739520..2741655 - 2136 WP_055452129.1 polyribonucleotide nucleotidyltransferase -
QUF32_RS12935 (KKIDH5335_24810) 2741940..2742209 - 270 WP_020332050.1 30S ribosomal protein S15 -
QUF32_RS12940 (KKIDH5335_24820) 2742326..2743273 - 948 WP_020332049.1 tRNA pseudouridine(55) synthase TruB -
QUF32_RS12945 (KKIDH5335_24830) 2743273..2743668 - 396 WP_020332048.1 30S ribosome-binding factor RbfA -
QUF32_RS12950 (KKIDH5335_24840) 2743768..2746473 - 2706 WP_020332047.1 Translation initiation factor IF-2 VF
QUF32_RS12955 (KKIDH5335_24850) 2746498..2747985 - 1488 WP_020332046.1 transcription termination factor NusA -
QUF32_RS12960 (KKIDH5335_24860) 2748004..2748459 - 456 WP_020332045.1 ribosome maturation factor RimP -
QUF32_RS12975 (KKIDH5335_24870) 2748908..2749246 - 339 WP_024374244.1 preprotein translocase subunit SecG -
QUF32_RS12980 (KKIDH5335_24880) 2749503..2750843 - 1341 WP_020332043.1 phosphoglucosamine mutase -
QUF32_RS12985 (KKIDH5335_24890) 2750860..2751699 - 840 WP_143683186.1 dihydropteroate synthase -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance