MGE detailed information
MGE type: Prophage MGE length: 94527 bp
Accession: NZ_AP028041 Location: 3340839..3435365 Organism: Phytobacter diazotrophicus strain TA9730 Replicon: chromosome
Accession: NZ_AP028041 Location: 3340839..3435365 Organism: Phytobacter diazotrophicus strain TA9730 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE90_RS16015 () | 3336755..3337555 | + | 801 | WP_039079531.1 | PTS mannose transporter subunit IIC | - |
| QUE90_RS16020 () | 3337568..3338422 | + | 855 | WP_039079532.1 | PTS mannose transporter subunit IID | - |
| QUE90_RS16025 () | 3338477..3338935 | + | 459 | WP_125124916.1 | DUF986 family protein | - |
| QUE90_RS16030 () | 3339314..3339880 | + | 567 | WP_079496713.1 | manganese efflux pump MntP | - |
| QUE90_RS16035 () | 3339877..3340692 | - | 816 | WP_039079535.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| QUE90_RS16040 () | 3340839..3341273 | - | 435 | WP_107224832.1 | IS200-IS605 family transposase ISShes4 | Transposase |
| QUE90_RS16045 () | 3341475..3341684 | - | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| QUE90_RS16050 () | 3341671..3341841 | - | 171 | WP_071845891.1 | DUF2627 domain-containing protein | - |
| QUE90_RS16055 () | 3342348..3343349 | - | 1002 | WP_125124917.1 | MBL fold metallo-hydrolase | - |
| QUE90_RS16060 () | 3343371..3343661 | - | 291 | WP_079496716.1 | YebO family protein | - |
| QUE90_RS16065 () | 3343736..3343879 | - | 144 | WP_072039749.1 | PhoP/PhoQ regulator MgrB | - |
| QUE90_RS16070 () | 3344038..3344277 | + | 240 | WP_039079538.1 | YobH family protein | - |
| QUE90_RS16075 () | 3344311..3345102 | - | 792 | WP_039079539.1 | DNA-binding transcriptional regulator KdgR | - |
| QUE90_RS16080 () | 3345280..3346650 | + | 1371 | WP_125125699.1 | MFS transporter | - |
| QUE90_RS16085 () | 3346696..3347577 | - | 882 | WP_039079541.1 | protease HtpX | - |
| QUE90_RS16090 () | 3347771..3349819 | - | 2049 | WP_039078755.1 | carboxy terminal-processing peptidase | - |
| QUE90_RS16095 () | 3349839..3350525 | - | 687 | WP_039078754.1 | RNA chaperone ProQ | - |
| QUE90_RS16100 () | 3350623..3351120 | - | 498 | WP_039078753.1 | GAF domain-containing protein | - |
| QUE90_RS16105 () | 3351254..3352537 | + | 1284 | WP_039078784.1 | membrane integrity lipid transport subunit YebS | - |
| QUE90_RS16110 () | 3352506..3355139 | + | 2634 | WP_172600672.1 | hypothetical protein | VF |
| QUE90_RS16115 () | 3355218..3356657 | + | 1440 | WP_108701548.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| QUE90_RS16120 () | 3356772..3357011 | + | 240 | WP_039078750.1 | YebV family protein | - |
| QUE90_RS16125 () | 3357116..3357307 | + | 192 | WP_039078749.1 | YebW family protein | - |
| QUE90_RS16130 () | 3357308..3357952 | - | 645 | WP_079496720.1 | protein-serine/threonine phosphatase | - |
| QUE90_RS16135 () | 3358124..3359068 | + | 945 | WP_071195201.1 | VirK/YbjX family protein | - |
| QUE90_RS16140 () | 3359674..3359892 | - | 219 | WP_039078747.1 | hypothetical protein | - |
| QUE90_RS16145 () | 3360315..3360806 | - | 492 | WP_232034346.1 | hypothetical protein | - |
| QUE90_RS16150 () | 3361592..3362263 | + | 672 | WP_125124919.1 | SOS response-associated peptidase | - |
| QUE90_RS16155 () | 3362296..3362799 | + | 504 | WP_125124920.1 | GNAT family N-acetyltransferase | - |
| QUE90_RS16160 () | 3362792..3364057 | - | 1266 | WP_125124921.1 | Y-family DNA polymerase | - |
| QUE90_RS16165 () | 3364060..3364482 | - | 423 | WP_125124922.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QUE90_RS16170 () | 3364642..3365781 | - | 1140 | WP_232034347.1 | tail fiber domain-containing protein | - |
| QUE90_RS16175 () | 3365833..3366177 | - | 345 | WP_125124923.1 | hypothetical protein | - |
| QUE90_RS16180 () | 3366445..3370596 | - | 4152 | WP_125124924.1 | DUF1983 domain-containing protein | - |
| QUE90_RS16185 () | 3370649..3371266 | - | 618 | WP_125124925.1 | tail assembly protein | - |
| QUE90_RS16190 () | 3371260..3371976 | - | 717 | WP_125124926.1 | C40 family peptidase | - |
| QUE90_RS16195 () | 3371978..3372715 | - | 738 | WP_125124927.1 | phage minor tail protein L | - |
| QUE90_RS16200 () | 3372771..3373109 | - | 339 | WP_041852387.1 | phage tail protein | - |
| QUE90_RS16205 () | 3373113..3375677 | - | 2565 | WP_125124928.1 | phage tail tape measure protein | - |
| QUE90_RS16210 () | 3375658..3375933 | - | 276 | WP_232034348.1 | phage tail assembly protein T | - |
| QUE90_RS16215 () | 3375984..3376394 | - | 411 | WP_125124930.1 | phage minor tail protein G | - |
| QUE90_RS16220 () | 3376407..3377138 | - | 732 | WP_125124286.1 | phage tail protein | - |
| QUE90_RS16225 () | 3377146..3377544 | - | 399 | WP_125124285.1 | phage minor tail U family protein | - |
| QUE90_RS16230 () | 3377541..3378098 | - | 558 | WP_125124284.1 | phage tail protein | - |
| QUE90_RS16235 () | 3378108..3378383 | - | 276 | WP_079497866.1 | ATP-binding protein | - |
| QUE90_RS16240 () | 3378376..3378699 | - | 324 | WP_079497865.1 | DUF2190 family protein | - |
| QUE90_RS16245 () | 3378778..3380793 | - | 2016 | WP_125124931.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| QUE90_RS16250 () | 3380735..3382249 | - | 1515 | WP_125124932.1 | phage portal protein | - |
| QUE90_RS16255 () | 3382249..3382464 | - | 216 | WP_125124933.1 | hypothetical protein | - |
| QUE90_RS16260 () | 3382461..3384581 | - | 2121 | WP_125124934.1 | phage terminase large subunit family protein | - |
| QUE90_RS16265 () | 3384581..3385072 | - | 492 | WP_125124935.1 | DUF1441 family protein | - |
| QUE90_RS16270 () | 3385292..3386074 | - | 783 | WP_125124936.1 | hypothetical protein | - |
| QUE90_RS16275 () | 3386273..3386455 | + | 183 | WP_125124937.1 | hypothetical protein | - |
| QUE90_RS16280 () | 3386521..3386982 | - | 462 | WP_125124938.1 | lysis protein | - |
| QUE90_RS16285 () | 3386979..3387191 | - | 213 | WP_125124939.1 | hypothetical protein | - |
| QUE90_RS16290 () | 3387208..3387744 | - | 537 | WP_125124940.1 | lysozyme | - |
| QUE90_RS16295 () | 3387744..3387959 | - | 216 | WP_047369739.1 | class II holin family protein | - |
| QUE90_RS16300 () | 3388164..3389069 | - | 906 | WP_125124941.1 | DUF5677 domain-containing protein | - |
| QUE90_RS16305 () | 3389074..3389421 | - | 348 | WP_125124942.1 | antiterminator Q family protein | - |
| QUE90_RS16310 () | 3389437..3390462 | - | 1026 | WP_125124943.1 | DUF968 domain-containing protein | - |
| QUE90_RS16315 () | 3390447..3390815 | - | 369 | WP_125124944.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QUE90_RS16320 () | 3390818..3391018 | - | 201 | WP_125124945.1 | hypothetical protein | - |
| QUE90_RS16325 () | 3391151..3391393 | - | 243 | WP_125124946.1 | hypothetical protein | - |
| QUE90_RS16330 () | 3391439..3391672 | - | 234 | WP_125124947.1 | DinI-like family protein | - |
| QUE90_RS16335 () | 3392327..3393325 | + | 999 | WP_125124948.1 | serine protease | - |
| QUE90_RS16340 () | 3393530..3395386 | - | 1857 | WP_125124949.1 | DNA cytosine methyltransferase | - |
| QUE90_RS16345 () | 3395383..3395643 | - | 261 | WP_125124950.1 | hypothetical protein | - |
| QUE90_RS16350 () | 3395640..3396371 | - | 732 | WP_125124951.1 | site-specific DNA-methyltransferase | - |
| QUE90_RS16355 () | 3396371..3396859 | - | 489 | WP_125124952.1 | hypothetical protein | - |
| QUE90_RS16360 () | 3396856..3397317 | - | 462 | WP_125124953.1 | hypothetical protein | - |
| QUE90_RS16365 () | 3397314..3397853 | - | 540 | WP_125124954.1 | hypothetical protein | - |
| QUE90_RS16370 () | 3397850..3398161 | - | 312 | WP_125124263.1 | hypothetical protein | - |
| QUE90_RS16375 () | 3398155..3398595 | - | 441 | WP_125124262.1 | hypothetical protein | - |
| QUE90_RS16380 () | 3398615..3399355 | - | 741 | WP_107222984.1 | IS21 family transposase ISJsp3 | Transposase |
| QUE90_RS16385 () | 3399358..3399927 | - | 570 | WP_286306179.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| QUE90_RS16390 () | 3400144..3400410 | - | 267 | Protein_3219 | DUF1376 domain-containing protein | - |
| QUE90_RS16395 () | 3400465..3401019 | - | 555 | WP_125124955.1 | toxin YdaT family protein | - |
| QUE90_RS16400 () | 3401038..3401244 | - | 207 | WP_090087851.1 | helix-turn-helix transcriptional regulator | - |
| QUE90_RS16405 () | 3401349..3401738 | + | 390 | WP_090087853.1 | helix-turn-helix domain-containing protein | - |
| QUE90_RS16410 () | 3402060..3402182 | + | 123 | WP_255498895.1 | hypothetical protein | - |
| QUE90_RS16415 () | 3402179..3402364 | + | 186 | WP_125124956.1 | DUF1482 family protein | - |
| QUE90_RS16420 () | 3402533..3402868 | + | 336 | WP_286279607.1 | hypothetical protein | - |
| QUE90_RS16425 () | 3402884..3403222 | + | 339 | WP_125124256.1 | Rrf2 family transcriptional regulator | - |
| QUE90_RS16430 () | 3403361..3405868 | + | 2508 | WP_125124957.1 | exonuclease | - |
| QUE90_RS16435 () | 3405933..3406205 | + | 273 | WP_107222989.1 | excisionase | - |
| QUE90_RS16440 () | 3406180..3407286 | + | 1107 | WP_125124958.1 | hypothetical protein ; Integrase | Integrase |
| - | 3407373..3407475 | - | 103 | - | - | Toxin Detail |
| - | 3407373..3407521 | + | 149 | - | - | Antitoxin Detail |
| QUE90_RS16445 () | 3407632..3407973 | - | 342 | WP_107222991.1 | YebY family protein | - |
| QUE90_RS16450 () | 3407988..3408857 | - | 870 | WP_079496722.1 | copper homeostasis membrane protein CopD | - |
| QUE90_RS16455 () | 3408859..3409233 | - | 375 | WP_071195198.1 | CopC domain-containing protein YobA | - |
| QUE90_RS16460 () | 3409371..3409601 | + | 231 | WP_039078743.1 | DNA polymerase III subunit theta | - |
| QUE90_RS16465 () | 3409598..3410275 | + | 678 | WP_125124959.1 | exodeoxyribonuclease X | - |
| QUE90_RS16470 () | 3410272..3412332 | - | 2061 | WP_125124960.1 | oligopeptidase B | - |
| QUE90_RS16475 () | 3412411..3413070 | - | 660 | WP_039078740.1 | tellurite resistance TerB family protein | - |
| QUE90_RS16480 () | 3413167..3413514 | - | 348 | WP_039078739.1 | protein YebF | - |
| QUE90_RS16485 () | 3413580..3413921 | - | 342 | WP_125124961.1 | YebG family protein | - |
| QUE90_RS16490 () | 3414055..3415233 | + | 1179 | WP_125124962.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| QUE90_RS16495 () | 3415282..3416424 | - | 1143 | WP_125124963.1 | fimbrial protein | - |
| QUE90_RS16500 () | 3416440..3417126 | - | 687 | WP_052249235.1 | hypothetical protein | VF |
| QUE90_RS16505 () | 3417355..3417993 | - | 639 | WP_125124964.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| QUE90_RS16510 () | 3418033..3419844 | - | 1812 | WP_039078733.1 | phosphogluconate dehydratase | - |
| QUE90_RS16515 () | 3420077..3421552 | - | 1476 | WP_039078732.1 | glucose-6-phosphate dehydrogenase | - |
| QUE90_RS16520 () | 3421898..3422767 | + | 870 | WP_039078781.1 | MurR/RpiR family transcriptional regulator | - |
| QUE90_RS16525 () | 3422889..3424331 | + | 1443 | WP_039078731.1 | pyruvate kinase | - |
| QUE90_RS16530 () | 3424497..3424931 | + | 435 | WP_107224832.1 | IS200-IS605 family transposase ISShes4 | Transposase |
| QUE90_RS16535 () | 3425003..3425974 | - | 972 | WP_039078730.1 | Lipid A biosynthesis myristoyltransferase | VF |
| QUE90_RS16540 () | 3426093..3427421 | - | 1329 | WP_039078729.1 | murein DD-endopeptidase MepM | - |
| QUE90_RS16545 () | 3427437..3428381 | - | 945 | WP_071195193.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| QUE90_RS16550 () | 3428460..3429215 | + | 756 | WP_039078727.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| QUE90_RS16555 () | 3429212..3429997 | + | 786 | WP_125124965.1 | hypothetical protein | VF |
| QUE90_RS16560 () | 3430077..3431090 | - | 1014 | WP_039078725.1 | Holliday junction branch migration DNA helicase RuvB | - |
| QUE90_RS16565 () | 3431099..3431710 | - | 612 | WP_039078724.1 | Holliday junction branch migration protein RuvA | - |
| QUE90_RS16570 () | 3431820..3432689 | - | 870 | WP_125124966.1 | SDR family oxidoreductase | - |
| QUE90_RS16575 () | 3432785..3433627 | + | 843 | WP_107222996.1 | helix-turn-helix transcriptional regulator | - |
| QUE90_RS16580 () | 3433599..3434120 | - | 522 | WP_039078721.1 | crossover junction endodeoxyribonuclease RuvC | - |
| QUE90_RS16585 () | 3434155..3434895 | - | 741 | WP_047370910.1 | transcriptional regulatory protein YebC | VF |
| QUE90_RS16590 () | 3434922..3435365 | - | 444 | WP_125124967.1 | dihydroneopterin triphosphate diphosphatase | - |
| QUE90_RS16595 () | 3435367..3437151 | - | 1785 | WP_125124968.1 | aspartate--tRNA ligase | - |
| QUE90_RS16600 () | 3437420..3437986 | + | 567 | WP_039078717.1 | hydrolase | - |
| QUE90_RS16605 () | 3437983..3438801 | + | 819 | WP_125124969.1 | DUF72 domain-containing protein | - |
| QUE90_RS16610 () | 3438850..3439245 | + | 396 | WP_039078715.1 | MAPEG family protein | - |
| QUE90_RS16615 () | 3439285..3440028 | + | 744 | WP_039078714.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|