MGE detailed information
MGE type: Prophage MGE length: 58429 bp
Accession: NZ_AP028041 Location: 1971839..2030267 Organism: Phytobacter diazotrophicus strain TA9730 Replicon: chromosome
Accession: NZ_AP028041 Location: 1971839..2030267 Organism: Phytobacter diazotrophicus strain TA9730 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE90_RS09210 (1967407) | 1967407..1968030 | - | 624 | WP_172600637.1 | LuxR C-terminal-related transcriptional regulator | - |
| QUE90_RS09215 (1968394) | 1968394..1970172 | - | 1779 | WP_125124249.1 | aminopeptidase P family protein | - |
| QUE90_RS09220 (1970191) | 1970191..1971645 | - | 1455 | WP_041851859.1 | AMP nucleosidase | - |
| QUE90_RS09225 (1971839) | 1971839..1972768 | - | 930 | WP_232034419.1 | MDR family oxidoreductase | - |
| QUE90_RS09230 (1972698) | 1972698..1973518 | - | 821 | Protein_1805 | TetR family transcriptional regulator C-terminal domain-containing protein | - |
| QUE90_RS09235 (1973737) | 1973737..1974090 | + | 354 | WP_125124251.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QUE90_RS09240 (1974093) | 1974093..1974395 | + | 303 | WP_071196363.1 | XRE family transcriptional regulator | Antitoxin Detail |
| QUE90_RS09245 (1974472) | 1974472..1975422 | + | 951 | WP_041851855.1 | L,D-transpeptidase | - |
| QUE90_RS09250 (1975515) | 1975515..1975703 | - | 189 | WP_041851854.1 | YjfB family protein | - |
| QUE90_RS09260 (1976301) | 1976301..1977218 | + | 918 | WP_041851853.1 | nitrogen assimilation transcriptional regulator NAC | - |
| QUE90_RS09265 (1977320) | 1977320..1978270 | + | 951 | WP_041851852.1 | HTH-type transcriptional regulator Cbl | - |
| QUE90_RS09270 (1978322) | 1978322..1978798 | - | 477 | WP_071196365.1 | GNAT family N-acetyltransferase | - |
| QUE90_RS09275 (1978890) | 1978890..1979813 | + | 924 | WP_125124252.1 | LysR family transcriptional regulator | - |
| QUE90_RS09285 (1980041) | 1980041..1980838 | - | 798 | WP_041851849.1 | DgsA anti-repressor MtfA | - |
| QUE90_RS09295 (1981102) | 1981102..1982130 | - | 1029 | WP_172600701.1 | hypothetical protein ; Integrase | Integrase |
| QUE90_RS09300 (1982099) | 1982099..1982347 | - | 249 | WP_125124254.1 | DUF4224 domain-containing protein | - |
| QUE90_RS09305 (1982418) | 1982418..1984889 | - | 2472 | WP_125124255.1 | exonuclease | - |
| QUE90_RS09310 (1985030) | 1985030..1985368 | - | 339 | WP_125124256.1 | Rrf2 family transcriptional regulator | - |
| QUE90_RS09315 (1985384) | 1985384..1985719 | - | 336 | WP_125124257.1 | hypothetical protein | - |
| QUE90_RS09320 (1985888) | 1985888..1986073 | - | 186 | WP_047369726.1 | DUF1482 family protein | - |
| QUE90_RS09325 (1986070) | 1986070..1986192 | - | 123 | WP_255498897.1 | IS21 family transposase ISAfe12 | Transposase |
| QUE90_RS09330 (1986515) | 1986515..1986952 | - | 438 | WP_125124258.1 | helix-turn-helix domain-containing protein | - |
| QUE90_RS09335 (1987042) | 1987042..1987293 | + | 252 | WP_125124259.1 | YdaS family helix-turn-helix protein | - |
| QUE90_RS09340 (1987274) | 1987274..1987828 | + | 555 | WP_125124260.1 | toxin YdaT family protein | - |
| QUE90_RS09345 (1987883) | 1987883..1988149 | + | 267 | Protein_1825 | DUF1376 domain-containing protein | - |
| QUE90_RS09350 (1988366) | 1988366..1988935 | + | 570 | WP_286306178.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| QUE90_RS09355 (1988938) | 1988938..1989678 | + | 741 | WP_125124261.1 | IS21 family transposase ISJsp3 | Transposase |
| QUE90_RS09360 (1989698) | 1989698..1990138 | + | 441 | WP_125124262.1 | hypothetical protein | - |
| QUE90_RS09365 (1990132) | 1990132..1990443 | + | 312 | WP_125124263.1 | hypothetical protein | - |
| QUE90_RS09370 (1990440) | 1990440..1991075 | + | 636 | WP_125124264.1 | hypothetical protein | - |
| QUE90_RS09375 (1991072) | 1991072..1991563 | + | 492 | WP_172600639.1 | hypothetical protein | - |
| QUE90_RS09380 (1991848) | 1991848..1992228 | + | 381 | Protein_1832 | DUF550 domain-containing protein | - |
| QUE90_RS09385 (1992249) | 1992249..1992509 | + | 261 | WP_125124265.1 | hypothetical protein | - |
| QUE90_RS09390 (1992506) | 1992506..1994479 | + | 1974 | WP_125124266.1 | DNA cytosine methyltransferase | - |
| QUE90_RS09395 (1995236) | 1995236..1995439 | + | 204 | WP_125124267.1 | hypothetical protein | - |
| QUE90_RS09400 (1995469) | 1995469..1996467 | + | 999 | WP_125124268.1 | serine protease | - |
| QUE90_RS09405 (1997205) | 1997205..1997405 | + | 201 | WP_125124945.1 | hypothetical protein | - |
| QUE90_RS09410 (1997408) | 1997408..1997776 | + | 369 | WP_125124271.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QUE90_RS09415 (1997761) | 1997761..1998786 | + | 1026 | WP_125124272.1 | DUF968 domain-containing protein | - |
| QUE90_RS09420 (1998803) | 1998803..1999378 | + | 576 | WP_125124273.1 | DUF1133 family protein | - |
| QUE90_RS09425 (1999470) | 1999470..2000375 | - | 906 | WP_125124274.1 | hypothetical protein | - |
| QUE90_RS09430 (2000610) | 2000610..2000825 | + | 216 | WP_047369739.1 | class II holin family protein | - |
| QUE90_RS09435 (2000825) | 2000825..2001361 | + | 537 | WP_125124275.1 | lysozyme | - |
| QUE90_RS09440 (2001378) | 2001378..2001590 | + | 213 | WP_125124276.1 | hypothetical protein | - |
| QUE90_RS09445 (2001587) | 2001587..2002048 | + | 462 | WP_125124277.1 | lysis protein | - |
| QUE90_RS09450 (2002146) | 2002146..2002445 | + | 300 | WP_125124278.1 | hypothetical protein | - |
| QUE90_RS09455 (2002514) | 2002514..2002888 | + | 375 | WP_125124279.1 | hypothetical protein | - |
| QUE90_RS09460 (2003042) | 2003042..2003779 | + | 738 | WP_125124280.1 | hypothetical protein | - |
| QUE90_RS09465 (2003999) | 2003999..2004490 | + | 492 | WP_079497860.1 | DUF1441 family protein | - |
| QUE90_RS09470 (2004490) | 2004490..2006610 | + | 2121 | WP_125124281.1 | phage terminase large subunit family protein | - |
| QUE90_RS09475 (2006607) | 2006607..2006822 | + | 216 | WP_090089253.1 | hypothetical protein | - |
| QUE90_RS09480 (2006822) | 2006822..2008330 | + | 1509 | WP_125124282.1 | phage portal protein | - |
| QUE90_RS09485 (2008272) | 2008272..2010287 | + | 2016 | WP_125124283.1 | DNA polymerase III subunit delta' | VF |
| QUE90_RS09490 (2010366) | 2010366..2010689 | + | 324 | WP_079497865.1 | DUF2190 family protein | - |
| QUE90_RS09495 (2010682) | 2010682..2010957 | + | 276 | WP_079497866.1 | ATP-binding protein | - |
| QUE90_RS09500 (2010967) | 2010967..2011524 | + | 558 | WP_125124284.1 | phage tail protein | - |
| QUE90_RS09505 (2011521) | 2011521..2011919 | + | 399 | WP_125124285.1 | phage minor tail U family protein | - |
| QUE90_RS09510 (2011927) | 2011927..2012658 | + | 732 | WP_125124286.1 | phage tail protein | - |
| QUE90_RS09515 (2012671) | 2012671..2013081 | + | 411 | WP_125124287.1 | phage minor tail protein G | - |
| QUE90_RS09520 (2013132) | 2013132..2013407 | + | 276 | WP_232034392.1 | phage tail assembly protein T | - |
| QUE90_RS09525 (2013388) | 2013388..2015961 | + | 2574 | WP_125124289.1 | phage tail tape measure protein | - |
| QUE90_RS09530 (2015964) | 2015964..2016311 | + | 348 | WP_125124290.1 | phage tail protein | - |
| QUE90_RS09535 (2016308) | 2016308..2017063 | + | 756 | WP_125124291.1 | phage minor tail protein L | - |
| QUE90_RS09540 (2017065) | 2017065..2017775 | + | 711 | WP_125124292.1 | C40 family peptidase | - |
| QUE90_RS09545 (2017838) | 2017838..2018392 | + | 555 | WP_197718609.1 | hypothetical protein | - |
| QUE90_RS09550 (2018459) | 2018459..2018608 | + | 150 | Protein_1866 | tail assembly protein | - |
| QUE90_RS09560 (2019828) | 2019828..2020283 | + | 456 | Protein_1868 | tail assembly protein | - |
| QUE90_RS09565 (2020335) | 2020335..2024117 | + | 3783 | WP_125124293.1 | DUF1983 domain-containing protein | - |
| QUE90_RS09570 (2024117) | 2024117..2025070 | + | 954 | WP_125124294.1 | DUF6453 family protein | - |
| QUE90_RS09575 (2025118) | 2025118..2026257 | + | 1140 | WP_232034394.1 | tail fiber domain-containing protein | - |
| QUE90_RS09580 (2026361) | 2026361..2026600 | + | 240 | WP_110295443.1 | hypothetical protein | - |
| QUE90_RS09585 (2026600) | 2026600..2026884 | + | 285 | WP_125124295.1 | hypothetical protein | - |
| QUE90_RS09590 (2027227) | 2027227..2028303 | - | 1077 | WP_079496393.1 | porin | - |
| QUE90_RS09595 (2029083) | 2029083..2029784 | + | 702 | WP_125124296.1 | phosphohydrolase | - |
| QUE90_RS09600 (2029803) | 2029803..2030267 | + | 465 | WP_041851846.1 | very short patch repair endonuclease | - |
| QUE90_RS09605 (2030271) | 2030271..2031182 | - | 912 | WP_071196369.1 | drug/metabolite exporter YedA | - |
| QUE90_RS09610 (2031375) | 2031375..2032286 | + | 912 | WP_071196370.1 | DUF808 domain-containing protein | - |
| QUE90_RS09615 (2032366) | 2032366..2032548 | + | 183 | WP_041851843.1 | DUF2158 domain-containing protein | - |
| QUE90_RS09620 (2032728) | 2032728..2033186 | + | 459 | WP_038918153.1 | IS200/IS605 family transposase | - |
| QUE90_RS09625 (2033361) | 2033361..2035073 | + | 1713 | WP_108701030.1 | cellulose biosynthesis regulator diguanylate cyclase DgcQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|