MGE detailed information
MGE type: Genomic_island MGE length: 44213 bp
Accession: NZ_AP027971 Location: 4178731..4222943 Organism: Escherichia coli strain VE-V10-F Replicon: chromosome
Accession: NZ_AP027971 Location: 4178731..4222943 Organism: Escherichia coli strain VE-V10-F Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQK73_RS20440 (4174189) | 4174189..4175304 | - | 1116 | WP_001022015.1 | S-methyl-5-thioribose-1-phosphate isomerase | - |
| QQK73_RS20445 (4175314) | 4175314..4176573 | - | 1260 | WP_000132325.1 | S-methyl-5-thioribose kinase | - |
| QQK73_RS20450 (4177373) | 4177373..4178310 | + | 938 | Protein_4001 | glycosyltransferase | - |
| QQK73_RS20455 (4178731) | 4178731..4180806 | + | 2076 | WP_000366620.1 | AAA family ATPase | - |
| QQK73_RS20460 (4180799) | 4180799..4182085 | + | 1287 | WP_000504875.1 | McrC family protein | - |
| QQK73_RS20465 (4182195) | 4182195..4183934 | + | 1740 | WP_000781649.1 | Alw26I/Eco31I/Esp3I family type II restriction endonuclease | - |
| QQK73_RS20470 (4183947) | 4183947..4185137 | - | 1191 | WP_001295727.1 | DNA (cytosine-5-)-methyltransferase | - |
| QQK73_RS20475 (4185130) | 4185130..4186752 | - | 1623 | WP_244583094.1 | Alw26I/Eco31I/Esp3I family type II restriction adenine-specific DNA-methyltransferase | - |
| QQK73_RS20480 (4187165) | 4187165..4187911 | - | 747 | WP_001016257.1 | IS21-like element ISEc12 family helper ATPase IstB | - |
| QQK73_RS20485 (4187926) | 4187926..4189467 | - | 1542 | WP_001298859.1 | IS21-like element ISEc12 family transposase | - |
| QQK73_RS20490 (4190061) | 4190061..4190237 | - | 177 | Protein_4009 | helix-turn-helix domain-containing protein | - |
| QQK73_RS20495 (4190604) | 4190604..4190753 | - | 150 | Protein_4010 | hypothetical protein | - |
| QQK73_RS20500 (4190859) | 4190859..4191035 | - | 177 | WP_000839286.1 | DUF957 domain-containing protein | - |
| QQK73_RS20505 (4191052) | 4191052..4191540 | - | 489 | WP_000761690.1 | DUF5983 family protein | - |
| QQK73_RS20510 (4191537) | 4191537..4191914 | - | 378 | WP_000854759.1 | TA system toxin CbtA family protein | Toxin Detail |
| QQK73_RS20515 (4192004) | 4192004..4192372 | - | 369 | WP_001295723.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QQK73_RS20520 (4192535) | 4192535..4192756 | - | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| QQK73_RS20525 (4192819) | 4192819..4193295 | - | 477 | WP_123004423.1 | RadC family protein | - |
| QQK73_RS20530 (4193311) | 4193311..4193460 | - | 150 | Protein_4017 | antirestriction protein | - |
| QQK73_RS20535 (4193736) | 4193736..4193852 | - | 117 | Protein_4018 | hypothetical protein | - |
| QQK73_RS20540 (4193971) | 4193971..4194120 | + | 150 | WP_071526287.1 | Hha/YmoA family nucleoid-associated regulatory protein | - |
| QQK73_RS20545 (4194453) | 4194453..4194650 | - | 198 | WP_001547002.1 | hypothetical protein | - |
| QQK73_RS20550 (4194850) | 4194850..4195419 | + | 570 | WP_000221530.1 | inovirus Gp2 family protein | - |
| QQK73_RS20555 (4195679) | 4195679..4196080 | + | 402 | WP_000270962.1 | putative zinc ribbon protein | - |
| QQK73_RS20560 (4196068) | 4196068..4196502 | + | 435 | WP_001221615.1 | zinc-ribbon domain-containing protein | - |
| QQK73_RS20565 (4196857) | 4196857..4197237 | + | 381 | WP_001171523.1 | transposase | - |
| QQK73_RS20570 (4197234) | 4197234..4197581 | + | 348 | WP_000612591.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| QQK73_RS20575 (4197631) | 4197631..4199016 | + | 1386 | WP_000998019.1 | IS66 family transposase | - |
| QQK73_RS20580 (4199255) | 4199255..4200613 | - | 1359 | WP_000823243.1 | esterase-like activity of phytase family protein | - |
| QQK73_RS20585 (4200895) | 4200895..4201026 | + | 132 | Protein_4028 | IS3 family transposase | - |
| QQK73_RS20590 (4201364) | 4201364..4201645 | - | 282 | WP_223349491.1 | biofilm development regulator YmgB/AriR family protein | - |
| QQK73_RS20595 (4201960) | 4201960..4202064 | - | 105 | Protein_4030 | IS3 family transposase | - |
| QQK73_RS20600 (4202091) | 4202091..4202240 | - | 150 | Protein_4031 | IS3 family transposase | - |
| QQK73_RS20605 (4202302) | 4202302..4202371 | + | 70 | Protein_4032 | hypothetical protein | - |
| QQK73_RS20610 (4202382) | 4202382..4203079 | - | 698 | Protein_4033 | IS1 family transposase | - |
| QQK73_RS20615 (4203166) | 4203166..4203234 | - | 69 | WP_211180522.1 | protein YkiE | - |
| QQK73_RS20620 (4203371) | 4203371..4203892 | + | 522 | WP_001283626.1 | RNA polymerase sigma factor FecI | - |
| QQK73_RS20625 (4203889) | 4203889..4204842 | + | 954 | WP_001068910.1 | ferric citrate uptake sigma factor regulator FecR | - |
| QQK73_RS20630 (4204929) | 4204929..4207253 | + | 2325 | WP_284330274.1 | TonB-dependent Fe(3+) dicitrate receptor FecA | - |
| QQK73_RS20635 (4207298) | 4207298..4208200 | + | 903 | WP_000879164.1 | Fe(3+) dicitrate ABC transporter substrate-binding protein FecB | - |
| QQK73_RS20640 (4208197) | 4208197..4209195 | + | 999 | WP_000125187.1 | iron-dicitrate ABC transporter permease FecC | - |
| QQK73_RS20645 (4209192) | 4209192..4210148 | + | 957 | WP_000684856.1 | Fe(3+) dicitrate ABC transporter permease subunit FecD | - |
| QQK73_RS20650 (4210149) | 4210149..4210916 | + | 768 | WP_000175457.1 | Fe(3+) dicitrate ABC transporter ATP-binding protein FecE | - |
| QQK73_RS20655 (4211473) | 4211473..4211730 | - | 258 | WP_000177057.1 | hypothetical protein | - |
| QQK73_RS20660 (4211813) | 4211813..4212979 | - | 1167 | Protein_4043 | IS3 family transposase | - |
| QQK73_RS20665 (4213067) | 4213067..4213270 | - | 204 | WP_000355616.1 | MFS transporter | - |
| QQK73_RS20670 (4213293) | 4213293..4213550 | + | 258 | WP_000254999.1 | surface-adhesin E family protein | - |
| QQK73_RS20675 (4213603) | 4213603..4213728 | - | 126 | WP_000594405.1 | protein YthA | - |
| QQK73_RS20680 (4213771) | 4213771..4214889 | - | 1119 | WP_000611568.1 | 2,7-anhydro-N-acetylneuraminate hydratase | - |
| QQK73_RS20685 (4214901) | 4214901..4216118 | - | 1218 | WP_000179692.1 | MFS transporter | - |
| QQK73_RS20690 (4216727) | 4216727..4218073 | + | 1347 | WP_000483778.1 | IS4-like element IS4 family transposase | - |
| QQK73_RS20695 (4218101) | 4218101..4218244 | - | 144 | WP_000050905.1 | hypothetical protein | - |
| QQK73_RS20700 (4218587) | 4218587..4218816 | - | 230 | Protein_4051 | transposase domain-containing protein | - |
| QQK73_RS20705 (4219403) | 4219403..4220584 | + | 1182 | Protein_4052 | phosphoethanolamine transferase | - |
| QQK73_RS20710 (4220801) | 4220801..4221498 | + | 698 | WP_094096600.1 | IS1-like element IS1A family transposase | - |
| QQK73_RS20715 (4221678) | 4221678..4222943 | - | 1266 | WP_001218934.1 | integrase arm-type DNA-binding domain-containing protein | - |
| QQK73_RS20725 (4223410) | 4223410..4224429 | + | 1020 | WP_015364387.1 | NADPH-dependent aldehyde reductase Ahr | - |
| QQK73_RS20730 (4224433) | 4224433..4224996 | - | 564 | WP_000896738.1 | gluconokinase | - |
| QQK73_RS20735 (4225213) | 4225213..4226244 | + | 1032 | WP_001197418.1 | L-idonate 5-dehydrogenase | - |
| QQK73_RS20740 (4226268) | 4226268..4227032 | + | 765 | WP_000998700.1 | gluconate 5-dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|