MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 148397 bp
Accession: NZ_AP027971 Location: 1259314..1407710 Organism: Escherichia coli strain VE-V10-F Replicon: chromosome
Accession: NZ_AP027971 Location: 1259314..1407710 Organism: Escherichia coli strain VE-V10-F Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQK73_RS06220 (1256886) | 1256886..1258313 | + | 1428 | WP_001365683.1 | two component system sensor histidine kinase QseE/GlrK | - |
| QQK73_RS06225 (1258478) | 1258478..1259191 | + | 714 | WP_001215861.1 | two-component system QseEF-associated lipoprotein QseG | - |
| QQK73_RS06230 (1259181) | 1259181..1260515 | + | 1335 | WP_001298983.1 | two-component system response regulator GlrR | - |
| QQK73_RS06235 (1260576) | 1260576..1260914 | + | 339 | WP_000717694.1 | nitrogen regulatory protein P-II | - |
| QQK73_RS06240 (1260959) | 1260959..1262149 | - | 1191 | WP_000883122.1 | NO-inducible flavohemoprotein | - |
| QQK73_RS06245 (1262478) | 1262478..1263731 | + | 1254 | WP_000919159.1 | serine hydroxymethyltransferase | - |
| QQK73_RS06250 (1263795) | 1263795..1264988 | - | 1194 | WP_001200787.1 | ROK family protein | - |
| QQK73_RS06255 (1265106) | 1265106..1268387 | + | 3282 | WP_015364518.1 | DUF5107 domain-containing protein | - |
| QQK73_RS06260 (1268484) | 1268484..1269467 | + | 984 | WP_001124911.1 | substrate-binding domain-containing protein | - |
| QQK73_RS06265 (1269490) | 1269490..1271001 | + | 1512 | WP_000493471.1 | sugar ABC transporter ATP-binding protein | - |
| QQK73_RS06270 (1271026) | 1271026..1272024 | + | 999 | WP_001276663.1 | ABC transporter permease | - |
| QQK73_RS06275 (1272057) | 1272057..1273151 | + | 1095 | WP_000700809.1 | zinc-binding dehydrogenase | - |
| QQK73_RS06280 (1273163) | 1273163..1274035 | + | 873 | WP_000158547.1 | aldose 1-epimerase | - |
| QQK73_RS06285 (1274083) | 1274083..1274505 | - | 423 | WP_001094726.1 | DoxX family protein | - |
| QQK73_RS06290 (1274602) | 1274602..1275804 | - | 1203 | WP_284329932.1 | phenylpropionate dioxygenase ferredoxin reductase subunit | - |
| QQK73_RS06295 (1275814) | 1275814..1276626 | - | 813 | WP_001281377.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | - |
| QQK73_RS06300 (1276623) | 1276623..1276943 | - | 321 | WP_001080102.1 | bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | - |
| QQK73_RS06305 (1276943) | 1276943..1277461 | - | 519 | WP_001276072.1 | 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | - |
| QQK73_RS06310 (1277458) | 1277458..1278819 | - | 1362 | WP_000211172.1 | aromatic ring-hydroxylating dioxygenase subunit alpha | - |
| QQK73_RS06315 (1278955) | 1278955..1279845 | + | 891 | WP_000423261.1 | DNA-binding transcriptional regulator HcaR | - |
| QQK73_RS06320 (1280005) | 1280005..1281144 | + | 1140 | WP_000244193.1 | 3-phenylpropionate MFS transporter | - |
| QQK73_RS06325 (1281136) | 1281136..1282416 | - | 1281 | WP_000982994.1 | stationary phase inducible protein CsiE | - |
| QQK73_RS06330 (1282607) | 1282607..1283461 | - | 855 | WP_001299515.1 | alpha/beta hydrolase | - |
| QQK73_RS06335 (1283606) | 1283606..1284409 | - | 804 | WP_000553451.1 | inositol-1-monophosphatase | - |
| QQK73_RS06340 (1284528) | 1284528..1285265 | + | 738 | WP_000940018.1 | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | - |
| QQK73_RS06345 (1285566) | 1285566..1286054 | + | 489 | WP_001241357.1 | Fe-S cluster assembly transcriptional regulator IscR | - |
| QQK73_RS06350 (1286166) | 1286166..1287380 | + | 1215 | WP_001295373.1 | cysteine desulfurase | - |
| QQK73_RS06355 (1287408) | 1287408..1287794 | + | 387 | WP_000331707.1 | Fe-S cluster assembly scaffold IscU | - |
| QQK73_RS06360 (1287811) | 1287811..1288134 | + | 324 | WP_000028953.1 | iron-sulfur cluster assembly protein IscA | - |
| QQK73_RS06365 (1288230) | 1288230..1288745 | + | 516 | WP_000384413.1 | co-chaperone HscB | - |
| QQK73_RS06370 (1288762) | 1288762..1290612 | + | 1851 | WP_001196613.1 | Fe-S protein assembly chaperone HscA | - |
| QQK73_RS06375 (1290614) | 1290614..1290949 | + | 336 | WP_001124469.1 | ISC system 2Fe-2S type ferredoxin | - |
| QQK73_RS06380 (1290961) | 1290961..1291161 | + | 201 | WP_000523616.1 | Fe-S cluster assembly protein IscX | - |
| QQK73_RS06385 (1291339) | 1291339..1292622 | + | 1284 | WP_000133582.1 | aminopeptidase PepB | - |
| QQK73_RS06390 (1292764) | 1292764..1293540 | + | 777 | WP_001356210.1 | enhanced serine sensitivity protein SseB | - |
| QQK73_RS06395 (1293572) | 1293572..1293697 | - | 126 | WP_001385884.1 | small toxic inner membrane protein TimP | - |
| QQK73_RS06400 (1294033) | 1294033..1294878 | - | 846 | WP_097246713.1 | 3-mercaptopyruvate sulfurtransferase | - |
| QQK73_RS06405 (1295085) | 1295085..1300046 | + | 4962 | WP_000736274.1 | alpha2-macroglobulin | - |
| QQK73_RS06410 (1300047) | 1300047..1302359 | + | 2313 | WP_001137655.1 | peptidoglycan glycosyltransferase PbpC | - |
| QQK73_RS06415 (1302508) | 1302508..1302939 | + | 432 | WP_000963837.1 | nucleoside-diphosphate kinase | - |
| QQK73_RS06420 (1303089) | 1303089..1304243 | + | 1155 | WP_000003317.1 | bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN | - |
| QQK73_RS06425 (1304528) | 1304528..1305541 | + | 1014 | WP_001090844.1 | cytoskeleton protein RodZ | - |
| QQK73_RS06430 (1305568) | 1305568..1306686 | + | 1119 | WP_000551807.1 | flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | - |
| QQK73_RS06435 (1306797) | 1306797..1308071 | + | 1275 | WP_001107167.1 | histidine--tRNA ligase | - |
| QQK73_RS06440 (1308089) | 1308089..1308709 | + | 621 | WP_000409205.1 | ancillary SecYEG translocon subunit YfgM | - |
| QQK73_RS06445 (1308720) | 1308720..1309898 | + | 1179 | WP_001177043.1 | outer membrane protein assembly factor BamB | - |
| QQK73_RS06450 (1310016) | 1310016..1311488 | + | 1473 | WP_000249410.1 | ribosome biogenesis GTPase Der | - |
| QQK73_RS06455 (1311557) | 1311557..1311772 | + | 216 | WP_001297332.1 | zinc ribbon domain-containing protein | - |
| QQK73_RS06460 (1311769) | 1311769..1313139 | - | 1371 | WP_000937933.1 | exodeoxyribonuclease VII large subunit | - |
| QQK73_RS06465 (1313301) | 1313301..1314767 | + | 1467 | WP_001299507.1 | IMP dehydrogenase | - |
| QQK73_RS06470 (1314836) | 1314836..1316413 | + | 1578 | WP_000138282.1 | glutamine-hydrolyzing GMP synthase | - |
| QQK73_RS06475 (1316722) | 1316722..1317930 | + | 1209 | WP_001297323.1 | site-specific integrase | - |
| QQK73_RS06480 (1318212) | 1318212..1318442 | + | 231 | WP_021542196.1 | AlpA family phage regulatory protein | - |
| QQK73_RS06485 (1318682) | 1318682..1319581 | + | 900 | WP_023342659.1 | replication initiator protein A | - |
| QQK73_RS06490 (1320037) | 1320037..1320147 | + | 111 | WP_232192652.1 | hypothetical protein | - |
| QQK73_RS06495 (1320888) | 1320888..1321196 | - | 309 | WP_001297325.1 | hypothetical protein | - |
| QQK73_RS06500 (1321363) | 1321363..1322901 | - | 1539 | WP_024188719.1 | P-type conjugative transfer protein TrbL | - |
| QQK73_RS06505 (1323089) | 1323089..1323880 | - | 792 | WP_001297334.1 | P-type conjugative transfer protein TrbJ | - |
| QQK73_RS06510 (1324151) | 1324151..1324375 | - | 225 | WP_001565720.1 | hypothetical protein | - |
| QQK73_RS06515 (1324378) | 1324378..1324587 | - | 210 | WP_000101768.1 | TraC family protein | - |
| QQK73_RS06520 (1325324) | 1325324..1326400 | + | 1077 | WP_001297336.1 | SIR2 family protein | - |
| QQK73_RS06525 (1326408) | 1326408..1328198 | + | 1791 | WP_001297331.1 | ATP-binding protein | - |
| QQK73_RS06530 (1328260) | 1328260..1328457 | + | 198 | WP_001297329.1 | hypothetical protein | - |
| QQK73_RS06535 (1328651) | 1328651..1329190 | - | 540 | WP_000755162.1 | DUF5384 family protein | - |
| QQK73_RS06540 (1329206) | 1329206..1329724 | - | 519 | WP_001295476.1 | glycine zipper 2TM domain-containing protein | - |
| QQK73_RS06545 (1330034) | 1330034..1330225 | - | 192 | WP_000076001.1 | YfgG family protein | - |
| QQK73_RS06550 (1330243) | 1330243..1330395 | + | 153 | WP_000017552.1 | hypothetical protein | - |
| QQK73_RS06555 (1330577) | 1330577..1332820 | + | 2244 | WP_000772759.1 | cyclic-guanylate-specific phosphodiesterase PdeF | - |
| QQK73_RS06560 (1332859) | 1332859..1334400 | - | 1542 | WP_001121363.1 | exopolyphosphatase | - |
| QQK73_RS06565 (1334405) | 1334405..1336471 | - | 2067 | WP_000529576.1 | polyphosphate kinase 1 | - |
| QQK73_RS06570 (1336642) | 1336642..1337280 | - | 639 | WP_001028614.1 | phosphoribosylglycinamide formyltransferase | - |
| QQK73_RS06575 (1337280) | 1337280..1338317 | - | 1038 | WP_001295474.1 | phosphoribosylformylglycinamidine cyclo-ligase | - |
| QQK73_RS06580 (1338642) | 1338642..1339268 | + | 627 | WP_001295473.1 | uracil phosphoribosyltransferase | - |
| QQK73_RS06585 (1339354) | 1339354..1340643 | + | 1290 | WP_000198328.1 | uracil permease | - |
| QQK73_RS06590 (1340738) | 1340738..1341439 | + | 702 | WP_001307333.1 | DnaA inactivator Hda | - |
| QQK73_RS06595 (1341577) | 1341577..1341936 | - | 360 | WP_000166467.1 | arsenate reductase (glutaredoxin) | - |
| QQK73_RS06600 (1341957) | 1341957..1343420 | - | 1464 | WP_000489667.1 | beta-barrel assembly-enhancing protease | - |
| QQK73_RS06605 (1343633) | 1343633..1344694 | + | 1062 | WP_000892044.1 | AI-2E family transporter | - |
| QQK73_RS06610 (1344732) | 1344732..1345580 | - | 849 | WP_001244724.1 | formate transporter FocB | - |
| QQK73_RS06615 (1345602) | 1345602..1347614 | - | 2013 | WP_001251559.1 | DNA-binding transcriptional regulator HyfR | - |
| QQK73_RS06620 (1347644) | 1347644..1348057 | - | 414 | WP_000796789.1 | hydrogenase 4 assembly chaperone HyfJ | - |
| QQK73_RS06625 (1348050) | 1348050..1348808 | - | 759 | WP_000075566.1 | hydrogenase 4 catalytic subunit HyfI | - |
| QQK73_RS06630 (1348805) | 1348805..1349350 | - | 546 | WP_000916058.1 | hydrogenase 4 subunit H | - |
| QQK73_RS06635 (1349360) | 1349360..1351027 | - | 1668 | WP_001102276.1 | hydrogenase 4 catalytic subunit HyfG | - |
| QQK73_RS06640 (1351017) | 1351017..1352597 | - | 1581 | WP_094316635.1 | hydrogenase 4 subunit F | - |
| QQK73_RS06645 (1352602) | 1352602..1353252 | - | 651 | WP_000147985.1 | hydrogenase 4 membrane subunit | - |
| QQK73_RS06650 (1353264) | 1353264..1354495 | - | 1232 | Protein_1300 | hydrogenase 4 subunit D | - |
| QQK73_RS06655 (1354512) | 1354512..1355459 | - | 948 | WP_001311024.1 | hydrogenase 4 subunit HyfC | - |
| QQK73_RS06660 (1355470) | 1355470..1357238 | - | 1769 | Protein_1302 | hydrogenase 4 subunit B | - |
| QQK73_RS06665 (1357487) | 1357487..1358104 | - | 618 | WP_001299064.1 | hydrogenase 4 subunit HyfA | - |
| QQK73_RS06670 (1358357) | 1358357..1358827 | - | 471 | WP_001068682.1 | thioredoxin-dependent thiol peroxidase | - |
| QQK73_RS06675 (1358827) | 1358827..1359399 | - | 573 | WP_000176187.1 | glycine cleavage system transcriptional repressor | - |
| QQK73_RS06680 (1359545) | 1359545..1360423 | + | 879 | WP_001295469.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| QQK73_RS06685 (1360440) | 1360440..1361474 | + | 1035 | WP_001297320.1 | outer membrane protein assembly factor BamC | - |
| QQK73_RS06690 (1361687) | 1361687..1362400 | + | 714 | WP_001295467.1 | phosphoribosylaminoimidazolesuccinocarboxamide synthase | - |
| QQK73_RS06695 (1362554) | 1362554..1362781 | + | 228 | WP_284329794.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| QQK73_RS06700 (1362781) | 1362781..1363179 | + | 399 | WP_000911330.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QQK73_RS06705 (1363326) | 1363326..1364189 | + | 864 | WP_001267507.1 | neutral zinc metallopeptidase | - |
| QQK73_RS06710 (1364204) | 1364204..1366219 | + | 2016 | WP_000829323.1 | tRNA cytosine(34) acetyltransferase TmcA | - |
| QQK73_RS06715 (1366293) | 1366293..1366991 | + | 699 | WP_000679823.1 | esterase | - |
| QQK73_RS06720 (1367101) | 1367101..1367301 | - | 201 | WP_000383836.1 | YpfN family protein | - |
| QQK73_RS06725 (1367329) | 1367329..1368456 | - | 1128 | WP_001277801.1 | succinyl-diaminopimelate desuccinylase | - |
| QQK73_RS06730 (1368460) | 1368460..1368816 | - | 357 | WP_000258247.1 | ArsC family reductase | - |
| QQK73_RS06735 (1369197) | 1369197..1369256 | + | 60 | WP_001386977.1 | protein YpfM | - |
| QQK73_RS06740 (1369355) | 1369355..1372468 | - | 3114 | WP_001273141.1 | multidrug efflux RND transporter permease AcrD | - |
| QQK73_RS06745 (1372632) | 1372632..1374332 | - | 1701 | WP_000636129.1 | nitrate/nitrite two-component system sensor histidine kinase NarQ | - |
| QQK73_RS06750 (1374538) | 1374538..1376517 | + | 1980 | WP_001078870.1 | formate-dependent uric acid utilization protein AegA | - |
| QQK73_RS06755 (1376585) | 1376585..1377160 | + | 576 | WP_097246710.1 | GDP-mannose pyrophosphatase NudK | - |
| QQK73_RS06760 (1377286) | 1377286..1378329 | + | 1044 | WP_001270524.1 | DUF1176 domain-containing protein | - |
| QQK73_RS06765 (1378425) | 1378425..1380428 | - | 2004 | WP_000087298.1 | transketolase | - |
| QQK73_RS06770 (1380448) | 1380448..1381398 | - | 951 | WP_001003738.1 | transaldolase | - |
| QQK73_RS06775 (1381687) | 1381687..1383966 | + | 2280 | WP_000342642.1 | NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase | - |
| QQK73_RS06780 (1384259) | 1384259..1384594 | + | 336 | WP_000356956.1 | ethanolamine utilization microcompartment protein EutS | - |
| QQK73_RS06785 (1384607) | 1384607..1385086 | + | 480 | WP_000820764.1 | ethanolamine utilization acetate kinase EutP | - |
| QQK73_RS06790 (1385061) | 1385061..1385762 | + | 702 | WP_000733903.1 | ethanolamine utilization acetate kinase EutQ | - |
| QQK73_RS06795 (1385759) | 1385759..1386562 | + | 804 | WP_000651298.1 | ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT | - |
| QQK73_RS06800 (1386559) | 1386559..1387575 | + | 1017 | Protein_1330 | phosphate acetyltransferase | - |
| QQK73_RS06805 (1387614) | 1387614..1387907 | + | 294 | WP_000387713.1 | ethanolamine utilization microcompartment protein EutM | - |
| QQK73_RS06810 (1388014) | 1388014..1388301 | + | 288 | WP_000762196.1 | ethanolamine utilization microcompartment protein EutN | - |
| QQK73_RS06815 (1388313) | 1388313..1389716 | + | 1404 | WP_001075711.1 | aldehyde dehydrogenase EutE | - |
| QQK73_RS06820 (1389727) | 1389727..1390563 | + | 837 | WP_000929709.1 | ethanolamine utilization protein EutJ | - |
| QQK73_RS06825 (1390553) | 1390553..1391740 | + | 1188 | WP_001356213.1 | ethanolamine utilization ethanol dehydrogenase EutG | - |
| QQK73_RS06830 (1391857) | 1391857..1393083 | + | 1227 | WP_000512372.1 | ethanolamine utilization protein EutH | - |
| QQK73_RS06835 (1393080) | 1393080..1394483 | + | 1404 | WP_001097452.1 | ethanolamine ammonia-lyase reactivating factor EutA | - |
| QQK73_RS06840 (1394495) | 1394495..1395856 | + | 1362 | WP_000770004.1 | ethanolamine ammonia-lyase subunit alpha | - |
| QQK73_RS06845 (1395877) | 1395877..1396764 | + | 888 | WP_000372364.1 | ethanolamine ammonia-lyase subunit beta | - |
| QQK73_RS06850 (1396774) | 1396774..1397433 | + | 660 | WP_001111038.1 | ethanolamine utilization microcompartment protein EutL | - |
| QQK73_RS06855 (1397446) | 1397446..1397946 | + | 501 | WP_000606257.1 | ethanolamine utilization microcompartment protein EutK | - |
| QQK73_RS06860 (1397992) | 1397992..1399044 | + | 1053 | WP_000753700.1 | HTH-type transcriptional regulator EutR | - |
| QQK73_RS06865 (1399050) | 1399050..1399949 | - | 900 | WP_000801367.1 | oxygen-dependent coproporphyrinogen oxidase | - |
| QQK73_RS06870 (1399953) | 1399953..1400822 | - | 870 | WP_000102891.1 | N-acetylmuramoyl-L-alanine amidase AmiA | - |
| QQK73_RS06875 (1401036) | 1401036..1401461 | + | 426 | WP_000406000.1 | GNAT family acetyltransferase | - |
| QQK73_RS06880 (1401448) | 1401448..1401897 | + | 450 | WP_000842944.1 | DUF2919 domain-containing protein | - |
| QQK73_RS06885 (1401958) | 1401958..1402533 | + | 576 | WP_000838945.1 | RpoE-regulated lipoprotein | - |
| QQK73_RS06890 (1402629) | 1402629..1403528 | + | 900 | WP_000084590.1 | porphyrinogen peroxidase | - |
| QQK73_RS06895 (1403586) | 1403586..1404890 | - | 1305 | WP_001315775.1 | penicillin binding protein PBP4B | - |
| QQK73_RS06900 (1404895) | 1404895..1406319 | - | 1425 | WP_001040482.1 | PTS N-acetylmuramic acid transporter subunit IIBC | - |
| QQK73_RS06905 (1406323) | 1406323..1407219 | - | 897 | WP_001175648.1 | N-acetylmuramic acid 6-phosphate etherase | - |
| QQK73_RS06910 (1407383) | 1407383..1408240 | + | 858 | WP_000966468.1 | HTH-type transcriptional regulator MurR | - |
| QQK73_RS06915 (1408369) | 1408369..1409160 | + | 792 | WP_000517431.1 | SDR family oxidoreductase UcpA | - |
| QQK73_RS06920 (1409331) | 1409331..1410347 | + | 1017 | WP_000290223.1 | thiosulfate/sulfate ABC transporter substrate-binding protein CysP | - |
| QQK73_RS06925 (1410347) | 1410347..1411180 | + | 834 | WP_000458405.1 | sulfate/thiosulfate ABC transporter permease CysT | - |
| QQK73_RS06930 (1411180) | 1411180..1412055 | + | 876 | WP_000852686.1 | sulfate/thiosulfate ABC transporter permease CysW | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|