MGE detailed information
MGE type: IScluster/Tn MGE length: 5006 bp
Accession: NZ_AP027963 Location: 3847931..3852936 Organism: Escherichia coli strain VE-T9 Replicon: chromosome
Accession: NZ_AP027963 Location: 3847931..3852936 Organism: Escherichia coli strain VE-T9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQK52_RS18795 () | 3843038..3845854 | - | 2817 | WP_284345351.1 | isoleucine--tRNA ligase | - |
| QQK52_RS18800 () | 3845897..3846838 | - | 942 | WP_097347118.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| QQK52_RS18805 () | 3846846..3847064 | - | 219 | WP_001295417.1 | DUF2575 family protein | - |
| QQK52_RS18810 () | 3847167..3847430 | + | 264 | WP_001274021.1 | 30S ribosomal protein S20 | - |
| QQK52_RS18815 () | 3847737..3848434 | + | 698 | WP_249438933.1 | IS1 family transposase IS1S | Transposase |
| QQK52_RS18820 () | 3848449..3848676 | + | 228 | Protein_3683 | fimbrial family protein | - |
| QQK52_RS18825 () | 3848714..3849613 | - | 900 | WP_001338226.1 | transcriptional activator NhaR | - |
| QQK52_RS18830 () | 3849679..3850845 | - | 1167 | WP_000681362.1 | Na+/H+ antiporter NhaA | - |
| - | 3851325..3851382 | - | 58 | - | - | Antitoxin Detail |
| QQK52_RS18835 () | 3851431..3851583 | + | 153 | WP_000809168.1 | type I toxin-antitoxin system toxin MokC | Toxin Detail |
| QQK52_RS18840 () | 3851661..3852773 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| QQK52_RS18845 () | 3853036..3854166 | - | 1131 | WP_001118475.1 | molecular chaperone DnaJ | - |
| QQK52_RS18850 () | 3854255..3856171 | - | 1917 | WP_000516135.1 | molecular chaperone DnaK | - |
| QQK52_RS18855 () | 3856548..3856952 | + | 405 | WP_000843565.1 | DUF2541 family protein | - |
| QQK52_RS18860 () | 3856978..3857691 | + | 714 | WP_016244256.1 | acidic protein MsyB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|