MGE detailed information
MGE type: Genomic_island MGE length: 78460 bp
Accession: NZ_AP027960 Location: 4335433..4413892 Organism: Escherichia coli strain VE-T2 Replicon: chromosome
Accession: NZ_AP027960 Location: 4335433..4413892 Organism: Escherichia coli strain VE-T2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQK13_RS21155 (4330804) | 4330804..4331988 | + | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| QQK13_RS21160 (4332138) | 4332138..4333148 | + | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| QQK13_RS21165 (4333244) | 4333244..4335370 | + | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| QQK13_RS21170 (4335433) | 4335433..4336710 | + | 1278 | WP_001083368.1 | MFS transporter | - |
| QQK13_RS21175 (4336710) | 4336710..4338140 | + | 1431 | WP_000813678.1 | glycoside hydrolase family 32 protein | - |
| QQK13_RS21180 (4338335) | 4338335..4339729 | + | 1395 | WP_001037798.1 | carbohydrate porin | - |
| QQK13_RS21185 (4340307) | 4340307..4340594 | - | 288 | Protein_4145 | integrase core domain-containing protein | - |
| QQK13_RS21190 (4340583) | 4340583..4340944 | - | 362 | Protein_4146 | IS1-like element IS1A family transposase | - |
| QQK13_RS21195 (4340994) | 4340994..4342028 | + | 1035 | WP_032153697.1 | tetratricopeptide repeat family protein | - |
| QQK13_RS21200 (4342172) | 4342172..4343845 | - | 1674 | WP_025492097.1 | sulfatase-like hydrolase/transferase | - |
| QQK13_RS21205 (4343898) | 4343898..4344095 | - | 198 | WP_001238004.1 | hypothetical protein | - |
| QQK13_RS21210 (4344235) | 4344235..4344501 | - | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| QQK13_RS21215 (4344498) | 4344498..4346069 | - | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| QQK13_RS21220 (4346116) | 4346116..4347195 | - | 1080 | WP_001207396.1 | hypothetical protein | - |
| QQK13_RS21225 (4347244) | 4347244..4348140 | - | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| QQK13_RS21230 (4348560) | 4348560..4349297 | - | 738 | WP_001398114.1 | OmpW family outer membrane protein | - |
| QQK13_RS21235 (4349527) | 4349527..4349705 | + | 179 | Protein_4155 | integrase | - |
| QQK13_RS21240 (4349928) | 4349928..4350824 | - | 897 | WP_234669458.1 | hypothetical protein | - |
| QQK13_RS21245 (4350824) | 4350824..4352446 | - | 1623 | WP_000778955.1 | AAA family ATPase | - |
| QQK13_RS21250 (4352455) | 4352455..4353597 | - | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| QQK13_RS21255 (4353594) | 4353594..4355228 | - | 1635 | WP_000627728.1 | class I SAM-dependent DNA methyltransferase | - |
| QQK13_RS21260 (4355292) | 4355292..4358705 | - | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| QQK13_RS21265 (4359313) | 4359313..4359827 | + | 515 | Protein_4161 | transposase | - |
| QQK13_RS21270 (4360127) | 4360127..4360393 | - | 267 | WP_032153698.1 | MazG-like family protein | - |
| QQK13_RS21275 (4360860) | 4360860..4361942 | + | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| QQK13_RS21280 (4361945) | 4361945..4362889 | - | 945 | WP_000820616.1 | hypothetical protein | - |
| QQK13_RS21285 (4362886) | 4362886..4363866 | - | 981 | WP_000174035.1 | thymidylate synthase | - |
| QQK13_RS21290 (4364034) | 4364034..4365195 | + | 1162 | Protein_4166 | IS3 family transposase | - |
| QQK13_RS21295 (4365346) | 4365346..4366578 | + | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| QQK13_RS21300 (4367029) | 4367029..4367292 | - | 264 | Protein_4168 | P fimbria major subunit PapA | - |
| QQK13_RS21305 (4367499) | 4367499..4367813 | - | 315 | WP_000930062.1 | adhesin biosynthesis transcription regulatory family protein | - |
| QQK13_RS21310 (4368236) | 4368236..4368514 | + | 279 | WP_001349530.1 | FaeA/PapI family transcriptional regulator | - |
| QQK13_RS21315 (4368448) | 4368448..4369104 | + | 657 | Protein_4171 | IS91-like element ISVsa3 family transposase | - |
| QQK13_RS21320 (4369135) | 4369135..4370019 | + | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| QQK13_RS21325 (4370236) | 4370236..4371450 | + | 1215 | WP_023300759.1 | chloramphenicol/florfenicol efflux MFS transporter FloR | - |
| QQK13_RS21330 (4371478) | 4371478..4371783 | + | 306 | WP_001255015.1 | LysR family transcriptional regulator | - |
| QQK13_RS21335 (4371895) | 4371895..4372083 | + | 189 | Protein_4175 | IS91 family transposase | - |
| QQK13_RS21340 (4372050) | 4372050..4373249 | - | 1200 | WP_032153701.1 | tetracycline efflux MFS transporter Tet(A) | - |
| QQK13_RS21345 (4373355) | 4373355..4374005 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| QQK13_RS21350 (4374037) | 4374037..4374279 | - | 243 | WP_000844627.1 | transposase | - |
| QQK13_RS21355 (4374585) | 4374585..4375421 | - | 837 | WP_000480968.1 | aminoglycoside O-phosphotransferase APH(6)-Id | - |
| QQK13_RS21360 (4375421) | 4375421..4376224 | - | 804 | WP_001082319.1 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| QQK13_RS21365 (4376285) | 4376285..4377100 | - | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| QQK13_RS21370 (4377190) | 4377190..4378280 | + | 1091 | WP_085940648.1 | IS4-like element ISAba1 family transposase | - |
| QQK13_RS21375 (4378530) | 4378530..4379096 | - | 567 | WP_000919994.1 | hypothetical protein | - |
| QQK13_RS21380 (4379959) | 4379959..4380134 | - | 176 | Protein_4184 | transposase | - |
| QQK13_RS21385 (4380323) | 4380323..4380499 | - | 177 | Protein_4185 | transketolase family protein | - |
| QQK13_RS21390 (4380559) | 4380559..4381250 | + | 692 | Protein_4186 | IS1 family transposase | - |
| QQK13_RS21395 (4381653) | 4381653..4381844 | + | 192 | WP_001323513.1 | hypothetical protein | - |
| QQK13_RS21400 (4381913) | 4381913..4382161 | + | 249 | WP_001349534.1 | ProQ/FINO family protein | - |
| QQK13_RS21405 (4382180) | 4382180..4382728 | - | 549 | WP_032153702.1 | hypothetical protein | - |
| QQK13_RS21410 (4382997) | 4382997..4383233 | - | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| QQK13_RS21415 (4383302) | 4383302..4383874 | - | 573 | WP_032153703.1 | hypothetical protein | - |
| QQK13_RS21420 (4383889) | 4383889..4384038 | + | 150 | WP_001421645.1 | hypothetical protein | - |
| QQK13_RS21425 (4384158) | 4384158..4384724 | - | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| QQK13_RS21430 (4386321) | 4386321..4387925 | - | 1605 | WP_001067608.1 | YfjI family protein | - |
| QQK13_RS21435 (4388359) | 4388359..4388565 | + | 207 | WP_025492114.1 | hypothetical protein | - |
| QQK13_RS21440 (4388577) | 4388577..4388837 | - | 261 | WP_223362175.1 | hypothetical protein | - |
| QQK13_RS21445 (4388861) | 4388861..4389016 | + | 156 | WP_020923993.1 | hypothetical protein | - |
| QQK13_RS21450 (4389110) | 4389110..4389841 | - | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| QQK13_RS21455 (4391592) | 4391592..4392401 | + | 810 | WP_032153709.1 | hypothetical protein | - |
| QQK13_RS21460 (4392398) | 4392398..4393330 | - | 933 | WP_023155730.1 | hypothetical protein | - |
| QQK13_RS21465 (4393437) | 4393437..4394321 | + | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| QQK13_RS21470 (4394440) | 4394440..4395117 | + | 678 | WP_023155728.1 | hypothetical protein | - |
| QQK13_RS21475 (4395147) | 4395147..4395356 | + | 210 | WP_023155727.1 | DUF905 family protein | - |
| QQK13_RS21480 (4395447) | 4395447..4396265 | + | 819 | WP_001234693.1 | DUF932 domain-containing protein | - |
| QQK13_RS21485 (4396357) | 4396357..4396842 | + | 486 | WP_032153711.1 | antirestriction protein | - |
| QQK13_RS21490 (4396858) | 4396858..4397334 | + | 477 | WP_001186715.1 | RadC family protein | - |
| QQK13_RS21495 (4397403) | 4397403..4397624 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| QQK13_RS21500 (4397704) | 4397704..4398078 | + | 375 | WP_032153712.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | - |
| QQK13_RS21505 (4398125) | 4398125..4398394 | + | 270 | Protein_4209 | TA system toxin CbtA family protein | - |
| QQK13_RS21510 (4398396) | 4398396..4398617 | + | 222 | Protein_4210 | cupin fold metalloprotein, WbuC family | - |
| QQK13_RS21515 (4398664) | 4398664..4399539 | - | 876 | WP_015387340.1 | extended-spectrum class A beta-lactamase CTX-M-55 | - |
| QQK13_RS21520 (4399792) | 4399792..4401054 | - | 1263 | WP_000608644.1 | IS1380-like element ISEcp1 family transposase | - |
| QQK13_RS21525 (4401227) | 4401227..4401352 | + | 126 | Protein_4213 | TA system toxin CbtA family protein | - |
| QQK13_RS21530 (4401349) | 4401349..4401840 | + | 492 | WP_023155722.1 | DUF5983 family protein | - |
| QQK13_RS21535 (4401852) | 4401852..4402049 | + | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| QQK13_RS21540 (4402134) | 4402134..4403000 | + | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| QQK13_RS21545 (4403072) | 4403072..4403335 | + | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| QQK13_RS21550 (4403332) | 4403332..4403658 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QQK13_RS21555 (4404541) | 4404541..4406079 | + | 1539 | WP_001187170.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QQK13_RS21560 (4406445) | 4406445..4407779 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QQK13_RS21565 (4407859) | 4407859..4410006 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| QQK13_RS21570 (4410065) | 4410065..4411522 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| QQK13_RS21575 (4411759) | 4411759..4413276 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| QQK13_RS21580 (4413395) | 4413395..4413568 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QQK13_RS21585 (4413596) | 4413596..4413892 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QQK13_RS21590 (4414119) | 4414119..4414391 | - | 273 | WP_000405649.1 | GNAT family N-acetyltransferase | - |
| QQK13_RS21595 (4414403) | 4414403..4414633 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QQK13_RS21600 (4414814) | 4414814..4416445 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| QQK13_RS21605 (4416442) | 4416442..4417161 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|