MGE detailed information
MGE type: Genomic_island MGE length: 80566 bp
Accession: NZ_AP027957 Location: 4331684..4412249 Organism: Escherichia coli strain VE-T10 Replicon: chromosome
Accession: NZ_AP027957 Location: 4331684..4412249 Organism: Escherichia coli strain VE-T10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQK14_RS21145 (4327368) | 4327368..4327706 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| QQK14_RS21150 (4327682) | 4327682..4329379 | + | 1698 | WP_000068973.1 | protein-disulfide reductase DsbD | - |
| QQK14_RS21155 (4329416) | 4329416..4329991 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| QQK14_RS21165 (4330350) | 4330350..4331534 | + | 1185 | WP_001218742.1 | tyrosine-type recombinase/integrase | - |
| QQK14_RS21170 (4331684) | 4331684..4332694 | + | 1011 | WP_000053331.1 | substrate-binding domain-containing protein | - |
| QQK14_RS21175 (4332790) | 4332790..4334916 | + | 2127 | WP_000253907.1 | alpha-galactosidase | - |
| QQK14_RS21180 (4334979) | 4334979..4336256 | + | 1278 | WP_001083368.1 | MFS transporter | - |
| QQK14_RS21185 (4336256) | 4336256..4337686 | + | 1431 | WP_000813678.1 | glycoside hydrolase family 32 protein | - |
| QQK14_RS21190 (4337881) | 4337881..4339275 | + | 1395 | WP_001037798.1 | carbohydrate porin | - |
| QQK14_RS21195 (4339853) | 4339853..4340140 | - | 288 | Protein_4148 | integrase core domain-containing protein | - |
| QQK14_RS21200 (4340129) | 4340129..4340490 | - | 362 | Protein_4149 | IS1 family transposase IS1A | Transposase |
| QQK14_RS21205 (4340540) | 4340540..4341574 | + | 1035 | WP_032153697.1 | tetratricopeptide repeat family protein | - |
| QQK14_RS21210 (4341718) | 4341718..4343391 | - | 1674 | WP_025492097.1 | sulfatase-like hydrolase/transferase | - |
| QQK14_RS21215 (4343444) | 4343444..4343641 | - | 198 | WP_001238004.1 | hypothetical protein | - |
| QQK14_RS21220 (4343781) | 4343781..4344047 | - | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| QQK14_RS21225 (4344044) | 4344044..4345615 | - | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| QQK14_RS21230 (4345662) | 4345662..4346741 | - | 1080 | WP_001207396.1 | hypothetical protein | - |
| QQK14_RS21235 (4346790) | 4346790..4347686 | - | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| QQK14_RS21240 (4348106) | 4348106..4348843 | - | 738 | WP_001398114.1 | OmpW family outer membrane protein | - |
| QQK14_RS21245 (4349073) | 4349073..4349251 | + | 179 | Protein_4158 | integrase | - |
| QQK14_RS21250 (4349474) | 4349474..4350370 | - | 897 | WP_234669458.1 | hypothetical protein | - |
| QQK14_RS21255 (4350370) | 4350370..4351992 | - | 1623 | WP_000778955.1 | AAA family ATPase | - |
| QQK14_RS21260 (4352001) | 4352001..4353143 | - | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| QQK14_RS21265 (4353140) | 4353140..4354774 | - | 1635 | WP_000627728.1 | class I SAM-dependent DNA methyltransferase | - |
| QQK14_RS21270 (4354838) | 4354838..4358251 | - | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| QQK14_RS21275 (4358859) | 4358859..4359373 | + | 515 | Protein_4164 | ISL3 family transposase ISEc38 | Transposase |
| QQK14_RS21280 (4359673) | 4359673..4359939 | - | 267 | WP_032153698.1 | MazG-like family protein | - |
| QQK14_RS21285 (4360406) | 4360406..4361488 | + | 1083 | WP_000637419.1 | XRE family transcriptional regulator | - |
| QQK14_RS21290 (4361491) | 4361491..4362435 | - | 945 | WP_000820616.1 | hypothetical protein | - |
| QQK14_RS21295 (4362432) | 4362432..4363412 | - | 981 | WP_000174035.1 | thymidylate synthase | - |
| QQK14_RS21300 (4363580) | 4363580..4364741 | + | 1162 | Protein_4169 | IS3 family transposase IS3 | Transposase |
| QQK14_RS21305 (4364892) | 4364892..4366124 | + | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| QQK14_RS21310 (4366575) | 4366575..4366838 | - | 264 | Protein_4171 | hypothetical protein | VF |
| QQK14_RS21315 (4367045) | 4367045..4367359 | - | 315 | WP_000930062.1 | hypothetical protein | VF |
| QQK14_RS21320 (4367782) | 4367782..4368060 | + | 279 | WP_001349530.1 | hypothetical protein | VF |
| QQK14_RS21325 (4367994) | 4367994..4368650 | + | 657 | Protein_4174 | IS91-like element ISVsa3 family transposase | - |
| QQK14_RS21330 (4368681) | 4368681..4369565 | + | 885 | WP_021598067.1 | DUF3363 domain-containing protein | - |
| QQK14_RS21335 (4369782) | 4369782..4370996 | + | 1215 | WP_023300759.1 | Multidrug resistance protein MdtL | ARG |
| QQK14_RS21340 (4371024) | 4371024..4371329 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| QQK14_RS21345 (4371441) | 4371441..4371629 | + | 189 | Protein_4178 | IS91 family transposase | - |
| QQK14_RS21350 (4371596) | 4371596..4372795 | - | 1200 | WP_032153701.1 | Multidrug resistance protein MdtG | ARG |
| QQK14_RS21355 (4372901) | 4372901..4373551 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| QQK14_RS21360 (4373583) | 4373583..4373825 | - | 243 | WP_000844627.1 | transposase | - |
| QQK14_RS21365 (4374131) | 4374131..4374967 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| QQK14_RS21370 (4374967) | 4374967..4375770 | - | 804 | WP_001082319.1 | hypothetical protein | ARG |
| QQK14_RS21375 (4375831) | 4375831..4376646 | - | 816 | WP_001043260.1 | hypothetical protein | ARG |
| QQK14_RS21380 (4376887) | 4376887..4377453 | - | 567 | WP_000919994.1 | hypothetical protein | - |
| QQK14_RS21385 (4378316) | 4378316..4378491 | - | 176 | Protein_4186 | transposase | - |
| QQK14_RS21390 (4378680) | 4378680..4378856 | - | 177 | Protein_4187 | transketolase family protein | - |
| QQK14_RS21395 (4378916) | 4378916..4379607 | + | 692 | Protein_4188 | IS1 family transposase | - |
| QQK14_RS21400 (4380010) | 4380010..4380201 | + | 192 | WP_001323513.1 | hypothetical protein | - |
| QQK14_RS21405 (4380270) | 4380270..4380518 | + | 249 | WP_001349534.1 | ProQ/FINO family protein | - |
| QQK14_RS21410 (4380537) | 4380537..4381085 | - | 549 | WP_032153702.1 | hypothetical protein | - |
| QQK14_RS21415 (4381354) | 4381354..4381590 | - | 237 | WP_000958154.1 | AlpA family transcriptional regulator | - |
| QQK14_RS21420 (4381659) | 4381659..4382231 | - | 573 | WP_032153703.1 | hypothetical protein | - |
| QQK14_RS21425 (4382246) | 4382246..4382395 | + | 150 | WP_001421645.1 | hypothetical protein | - |
| QQK14_RS21430 (4382515) | 4382515..4383081 | - | 567 | WP_032153705.1 | inovirus-type Gp2 protein | - |
| QQK14_RS21435 (4384678) | 4384678..4386282 | - | 1605 | WP_001067608.1 | YfjI family protein | - |
| QQK14_RS21440 (4386716) | 4386716..4386922 | + | 207 | WP_025492114.1 | hypothetical protein | - |
| QQK14_RS21445 (4386934) | 4386934..4387194 | - | 261 | WP_223362175.1 | hypothetical protein | - |
| QQK14_RS21450 (4387218) | 4387218..4387373 | + | 156 | WP_020923993.1 | hypothetical protein | - |
| QQK14_RS21455 (4387467) | 4387467..4388198 | - | 732 | WP_032153707.1 | inovirus Gp2 family protein | - |
| QQK14_RS21460 (4389949) | 4389949..4390758 | + | 810 | WP_032153709.1 | hypothetical protein | - |
| QQK14_RS21465 (4390755) | 4390755..4391687 | - | 933 | WP_023155730.1 | hypothetical protein | - |
| QQK14_RS21470 (4391794) | 4391794..4392678 | + | 885 | WP_024166630.1 | 50S ribosome-binding GTPase | - |
| QQK14_RS21475 (4392797) | 4392797..4393474 | + | 678 | WP_023155728.1 | hypothetical protein | - |
| QQK14_RS21480 (4393504) | 4393504..4393713 | + | 210 | WP_023155727.1 | DUF905 family protein | - |
| QQK14_RS21485 (4393804) | 4393804..4394622 | + | 819 | WP_001234693.1 | DUF932 domain-containing protein | - |
| QQK14_RS21490 (4394714) | 4394714..4395199 | + | 486 | WP_032153711.1 | antirestriction protein | - |
| QQK14_RS21495 (4395215) | 4395215..4395691 | + | 477 | WP_001186715.1 | RadC family protein | - |
| QQK14_RS21500 (4395760) | 4395760..4395981 | + | 222 | WP_000692345.1 | DUF987 domain-containing protein | - |
| QQK14_RS21505 (4396061) | 4396061..4396435 | + | 375 | WP_032153712.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | - |
| QQK14_RS21510 (4396482) | 4396482..4396751 | + | 270 | Protein_4211 | TA system toxin CbtA family protein | - |
| QQK14_RS21515 (4396753) | 4396753..4396974 | + | 222 | Protein_4212 | cupin fold metalloprotein, WbuC family | - |
| QQK14_RS21520 (4397021) | 4397021..4397896 | - | 876 | WP_015387340.1 | hypothetical protein | ARG |
| QQK14_RS21525 (4398149) | 4398149..4399411 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| QQK14_RS21530 (4399584) | 4399584..4399709 | + | 126 | Protein_4215 | TA system toxin CbtA family protein | - |
| QQK14_RS21535 (4399706) | 4399706..4400197 | + | 492 | WP_023155722.1 | DUF5983 family protein | - |
| QQK14_RS21540 (4400209) | 4400209..4400406 | + | 198 | WP_000839265.1 | DUF957 domain-containing protein | - |
| QQK14_RS21545 (4400491) | 4400491..4401357 | + | 867 | WP_032153714.1 | DUF4942 domain-containing protein | - |
| QQK14_RS21550 (4401429) | 4401429..4401692 | + | 264 | WP_025492088.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| QQK14_RS21555 (4401689) | 4401689..4402015 | + | 327 | WP_000779483.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QQK14_RS21560 (4402898) | 4402898..4404436 | + | 1539 | WP_001187170.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QQK14_RS21565 (4404802) | 4404802..4406136 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QQK14_RS21570 (4406216) | 4406216..4408363 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| QQK14_RS21575 (4408422) | 4408422..4409879 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| QQK14_RS21580 (4410116) | 4410116..4411633 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| QQK14_RS21585 (4411752) | 4411752..4411925 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QQK14_RS21590 (4411953) | 4411953..4412249 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QQK14_RS21595 (4412476) | 4412476..4412748 | - | 273 | WP_000405649.1 | GNAT family N-acetyltransferase | - |
| QQK14_RS21600 (4412760) | 4412760..4412990 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QQK14_RS21605 (4413171) | 4413171..4414802 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| QQK14_RS21610 (4414799) | 4414799..4415518 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|