MGE detailed information
MGE type: Prophage MGE length: 44945 bp
Accession: NZ_AP027953 Location: 3667793..3712737 Organism: Escherichia coli strain VE-F5 Replicon: chromosome
Accession: NZ_AP027953 Location: 3667793..3712737 Organism: Escherichia coli strain VE-F5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQJ99_RS17935 (3664695) | 3664695..3665651 | + | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| QQJ99_RS17940 (3665702) | 3665702..3666040 | + | 339 | Protein_3509 | LysR substrate-binding domain-containing protein | - |
| QQJ99_RS17945 (3666605) | 3666605..3667744 | + | 1140 | WP_000784327.1 | hypothetical protein | - |
| QQJ99_RS17955 (3668793) | 3668793..3669155 | - | 363 | WP_000461705.1 | type II toxin-antitoxin system RnlB family antitoxin | Antitoxin Detail |
| QQJ99_RS17960 (3669148) | 3669148..3670218 | - | 1071 | WP_001730411.1 | type II toxin-antitoxin system RnlA family toxin | Toxin Detail |
| QQJ99_RS17965 (3670353) | 3670353..3670549 | - | 197 | Protein_3514 | recombinase family protein | - |
| QQJ99_RS17970 (3670619) | 3670619..3671203 | - | 585 | WP_284317960.1 | tail fiber assembly protein | - |
| QQJ99_RS17975 (3671203) | 3671203..3674481 | - | 3279 | WP_284317961.1 | phage tail protein | - |
| QQJ99_RS17980 (3674546) | 3674546..3675145 | - | 600 | WP_001233090.1 | hypothetical protein | VF |
| QQJ99_RS17985 (3675216) | 3675216..3678713 | - | 3498 | WP_286608980.1 | host specificity protein J | - |
| QQJ99_RS17990 (3678773) | 3678773..3679345 | - | 573 | WP_000847704.1 | tail assembly protein | - |
| QQJ99_RS17995 (3679342) | 3679342..3680085 | - | 744 | WP_053887856.1 | C40 family peptidase | - |
| QQJ99_RS18000 (3680091) | 3680091..3680789 | - | 699 | WP_240764203.1 | phage minor tail protein L | - |
| QQJ99_RS18005 (3680789) | 3680789..3681118 | - | 330 | WP_000847379.1 | phage tail protein | - |
| QQJ99_RS18010 (3681115) | 3681115..3683676 | - | 2562 | WP_240764204.1 | phage tail tape measure protein | - |
| QQJ99_RS18015 (3683669) | 3683669..3684103 | - | 435 | WP_000459480.1 | phage tail assembly protein T | - |
| QQJ99_RS18020 (3684085) | 3684085..3684507 | - | 423 | WP_000479150.1 | phage minor tail protein G | - |
| QQJ99_RS18025 (3684523) | 3684523..3685263 | - | 741 | WP_001380324.1 | phage tail protein | - |
| QQJ99_RS18030 (3685271) | 3685271..3685666 | - | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| QQJ99_RS18035 (3685663) | 3685663..3686241 | - | 579 | WP_001595432.1 | phage tail protein | - |
| QQJ99_RS18040 (3686253) | 3686253..3686606 | - | 354 | WP_282091028.1 | head-tail joining protein | - |
| QQJ99_RS18045 (3686618) | 3686618..3687013 | - | 396 | WP_282091029.1 | DNA-packaging protein FI | - |
| QQJ99_RS18050 (3687055) | 3687055..3688080 | - | 1026 | WP_282091030.1 | major capsid protein | - |
| QQJ99_RS18055 (3688137) | 3688137..3688469 | - | 333 | WP_001299443.1 | head decoration protein | - |
| QQJ99_RS18060 (3688479) | 3688479..3689798 | - | 1320 | WP_282091031.1 | S49 family peptidase | - |
| QQJ99_RS18065 (3689779) | 3689779..3691380 | - | 1602 | WP_001345555.1 | phage portal protein | - |
| QQJ99_RS18070 (3691377) | 3691377..3691583 | - | 207 | WP_000198149.1 | gpW family protein | - |
| QQJ99_RS18075 (3691580) | 3691580..3693505 | - | 1926 | WP_282091032.1 | phage terminase large subunit family protein | - |
| QQJ99_RS18080 (3693480) | 3693480..3694025 | - | 546 | WP_032259799.1 | DNA-packaging protein | - |
| QQJ99_RS18085 (3694414) | 3694414..3694647 | + | 234 | WP_001663509.1 | YlcI/YnfO family protein | - |
| QQJ99_RS18090 (3694704) | 3694704..3695114 | + | 411 | WP_000079508.1 | DUF1398 family protein | - |
| QQJ99_RS18095 (3695466) | 3695466..3695618 | - | 153 | WP_001139678.1 | hypothetical protein | - |
| QQJ99_RS18100 (3695606) | 3695606..3696073 | - | 468 | WP_001470001.1 | lysis protein | - |
| QQJ99_RS18105 (3696070) | 3696070..3696567 | - | 498 | WP_001135256.1 | lysozyme | - |
| QQJ99_RS18110 (3696567) | 3696567..3696782 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| QQJ99_RS18115 (3697356) | 3697356..3698438 | + | 1083 | WP_024238521.1 | porin OmpC | - |
| QQJ99_RS18120 (3698627) | 3698627..3699010 | - | 384 | WP_001204780.1 | antitermination protein QuuD | - |
| QQJ99_RS18125 (3699096) | 3699096..3699236 | - | 141 | WP_000971055.1 | YlcG family protein | - |
| QQJ99_RS18130 (3699233) | 3699233..3699595 | - | 363 | WP_135561016.1 | crossover junction endodeoxyribonuclease RusA | - |
| QQJ99_RS18135 (3699592) | 3699592..3699882 | - | 291 | WP_000774486.1 | DUF1364 domain-containing protein | - |
| QQJ99_RS18140 (3699875) | 3699875..3700045 | - | 171 | WP_000224914.1 | NinE family protein | - |
| QQJ99_RS18145 (3700045) | 3700045..3700500 | - | 456 | WP_135561017.1 | DNA base-flipping protein YbcN | - |
| QQJ99_RS18150 (3700497) | 3700497..3700598 | - | 102 | WP_072141579.1 | hypothetical protein | - |
| QQJ99_RS18155 (3700707) | 3700707..3700907 | - | 201 | WP_000379697.1 | hypothetical protein | - |
| QQJ99_RS18160 (3701553) | 3701553..3702047 | - | 495 | WP_001224618.1 | type VI secretion system-associated protein TagO | - |
| QQJ99_RS18165 (3702197) | 3702197..3702367 | - | 171 | Protein_3554 | protein ren | - |
| QQJ99_RS18170 (3702364) | 3702364..3703065 | - | 702 | WP_136764554.1 | replication protein P | - |
| QQJ99_RS18175 (3703062) | 3703062..3704081 | - | 1020 | WP_191637494.1 | replication protein | - |
| QQJ99_RS18180 (3704078) | 3704078..3704617 | - | 540 | WP_001182903.1 | toxin YdaT domain-containing protein | - |
| QQJ99_RS18185 (3704687) | 3704687..3704917 | - | 231 | WP_001067458.1 | helix-turn-helix domain-containing protein | - |
| QQJ99_RS18190 (3705022) | 3705022..3705711 | + | 690 | WP_000858975.1 | helix-turn-helix transcriptional regulator | - |
| QQJ99_RS18195 (3705792) | 3705792..3706853 | + | 1062 | WP_000380252.1 | hypothetical protein | - |
| QQJ99_RS18200 (3706831) | 3706831..3707208 | + | 378 | WP_000866321.1 | ASCH domain-containing protein | - |
| QQJ99_RS18205 (3707686) | 3707686..3707892 | + | 207 | WP_000233582.1 | phage encoded cell division inhibitor protein | - |
| QQJ99_RS18210 (3707968) | 3707968..3708264 | + | 297 | WP_000995439.1 | host-nuclease inhibitor Gam family protein | - |
| QQJ99_RS18215 (3708270) | 3708270..3709055 | + | 786 | WP_000100847.1 | phage recombination protein Bet | - |
| QQJ99_RS18220 (3709052) | 3709052..3709732 | + | 681 | WP_000186811.1 | YqaJ viral recombinase family protein | - |
| QQJ99_RS18225 (3709729) | 3709729..3709890 | + | 162 | WP_000682319.1 | DUF1317 family protein | - |
| QQJ99_RS18230 (3709883) | 3709883..3710440 | + | 558 | WP_000129285.1 | phage N-6-adenine-methyltransferase | - |
| QQJ99_RS18235 (3710517) | 3710517..3710732 | + | 216 | WP_210114583.1 | cell division protein ZapA | - |
| QQJ99_RS18240 (3710831) | 3710831..3711049 | + | 219 | WP_000763385.1 | TraR/DksA family transcriptional regulator | - |
| QQJ99_RS18245 (3711097) | 3711097..3711375 | + | 279 | WP_000488407.1 | DUF4222 domain-containing protein | - |
| QQJ99_RS18250 (3711347) | 3711347..3711697 | + | 351 | WP_071830316.1 | helix-turn-helix domain-containing protein | - |
| QQJ99_RS18255 (3711619) | 3711619..3712737 | + | 1119 | WP_001132557.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| QQJ99_RS18265 (3712942) | 3712942..3714195 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| QQJ99_RS18270 (3714207) | 3714207..3715310 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| QQJ99_RS18275 (3715598) | 3715598..3716653 | + | 1056 | WP_000749867.1 | phosphoporin PhoE | - |
| QQJ99_RS18280 (3716692) | 3716692..3717093 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|