MGE detailed information
MGE type: Prophage MGE length: 50134 bp
Accession: NZ_AP027953 Location: 2293779..2343912 Organism: Escherichia coli strain VE-F5 Replicon: chromosome
Accession: NZ_AP027953 Location: 2293779..2343912 Organism: Escherichia coli strain VE-F5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQJ99_RS11255 (2291154) | 2291154..2293580 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| QQJ99_RS11260 (2293779) | 2293779..2294084 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| QQJ99_RS11265 (2294192) | 2294192..2294902 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| QQJ99_RS11270 (2294905) | 2294905..2295465 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| QQJ99_RS11275 (2295500) | 2295500..2295841 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| QQJ99_RS11280 (2295976) | 2295976..2296302 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| QQJ99_RS11285 (2296508) | 2296508..2297722 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| QQJ99_RS11290 (2297734) | 2297734..2298753 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| QQJ99_RS11295 (2298941) | 2298941..2300221 | - | 1281 | WP_000876958.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| QQJ99_RS11300 (2300256) | 2300256..2300507 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| QQJ99_RS11305 (2300580) | 2300580..2303051 | - | 2472 | Protein_2209 | 3'-5' exoribonuclease | - |
| QQJ99_RS11310 (2303144) | 2303144..2303335 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| QQJ99_RS11315 (2303332) | 2303332..2303520 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| QQJ99_RS11320 (2304088) | 2304088..2304306 | - | 219 | WP_001171942.1 | protein YdfC | - |
| QQJ99_RS11325 (2304336) | 2304336..2304464 | - | 129 | WP_000344964.1 | protein YdfB | - |
| QQJ99_RS11330 (2304466) | 2304466..2304621 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| QQJ99_RS11335 (2304788) | 2304788..2305195 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| QQJ99_RS11340 (2305279) | 2305279..2305509 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| QQJ99_RS11345 (2305493) | 2305493..2306014 | + | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| QQJ99_RS11350 (2305995) | 2305995..2306960 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| QQJ99_RS11355 (2307001) | 2307001..2307423 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| QQJ99_RS11360 (2307420) | 2307420..2307909 | + | 490 | Protein_2220 | class I SAM-dependent methyltransferase | - |
| QQJ99_RS11365 (2308292) | 2308292..2309831 | - | 1540 | Protein_2221 | IS66 family transposase ISEc22 | Transposase |
| QQJ99_RS11370 (2309880) | 2309880..2310227 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| QQJ99_RS11375 (2310224) | 2310224..2310628 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| QQJ99_RS11380 (2310850) | 2310850..2311271 | + | 422 | Protein_2224 | hypothetical protein | - |
| QQJ99_RS11385 (2311927) | 2311927..2312997 | + | 1071 | Protein_2225 | ISNCY family transposase ISCARN112 | Transposase |
| QQJ99_RS11390 (2313070) | 2313070..2313219 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| QQJ99_RS11395 (2313656) | 2313656..2313988 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| QQJ99_RS11400 (2314191) | 2314191..2314496 | - | 306 | WP_001326990.1 | protein YdfV | - |
| QQJ99_RS11405 (2314521) | 2314521..2314760 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QQJ99_RS11410 (2314760) | 2314760..2315047 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QQJ99_RS11415 (2315119) | 2315119..2315274 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QQJ99_RS11420 (2315491) | 2315491..2315742 | + | 252 | WP_000980994.1 | protein Rem | - |
| QQJ99_RS11425 (2315809) | 2315809..2316087 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| QQJ99_RS11430 (2316089) | 2316089..2317138 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| QQJ99_RS11435 (2317152) | 2317152..2317622 | + | 471 | Protein_2235 | antitermination protein | - |
| QQJ99_RS11440 (2317677) | 2317677..2318374 | + | 698 | WP_106423973.1 | IS1 family transposase | - |
| QQJ99_RS11445 (2318384) | 2318384..2319073 | + | 690 | WP_096949767.1 | phage minor tail protein L | - |
| QQJ99_RS11450 (2319079) | 2319079..2319822 | + | 744 | WP_000194783.1 | C40 family peptidase | - |
| QQJ99_RS11455 (2319819) | 2319819..2320391 | + | 573 | WP_000847669.1 | tail assembly protein | - |
| QQJ99_RS11460 (2320451) | 2320451..2323948 | + | 3498 | WP_000515714.1 | host specificity protein J | - |
| QQJ99_RS11465 (2324018) | 2324018..2324617 | + | 600 | WP_001230375.1 | hypothetical protein | VF |
| QQJ99_RS11470 (2324682) | 2324682..2326349 | + | 1668 | Protein_2242 | prophage tail fiber N-terminal domain-containing protein | - |
| QQJ99_RS11480 (2328169) | 2328169..2329017 | + | 849 | WP_000127649.1 | phage tail protein | - |
| QQJ99_RS11485 (2329017) | 2329017..2329592 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| QQJ99_RS11490 (2329690) | 2329690..2330280 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QQJ99_RS11495 (2330597) | 2330597..2330830 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QQJ99_RS11500 (2330899) | 2330899..2331012 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QQJ99_RS11505 (2331533) | 2331533..2332900 | + | 1368 | Protein_2249 | MHS family MFS transporter | - |
| QQJ99_RS11510 (2332989) | 2332989..2334449 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| QQJ99_RS11515 (2334484) | 2334484..2334687 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| QQJ99_RS11520 (2334864) | 2334864..2335550 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QQJ99_RS11525 (2335639) | 2335639..2336385 | - | 747 | WP_000636571.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| QQJ99_RS11530 (2336522) | 2336522..2338567 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| QQJ99_RS11535 (2338611) | 2338611..2339129 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| QQJ99_RS11540 (2339405) | 2339405..2339797 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| QQJ99_RS11545 (2340052) | 2340052..2340942 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| QQJ99_RS11550 (2341057) | 2341057..2341161 | - | 105 | WP_211180496.1 | protein MgtT | - |
| QQJ99_RS11555 (2341161) | 2341161..2341256 | - | 96 | WP_000901367.1 | protein MgtS | - |
| QQJ99_RS11560 (2341383) | 2341383..2342570 | - | 1188 | WP_001054183.1 | efflux MFS transporter YdeE | - |
| QQJ99_RS11565 (2342765) | 2342765..2343663 | + | 899 | Protein_2261 | O-acetylserine/cysteine exporter | - |
| QQJ99_RS11570 (2343694) | 2343694..2343912 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| QQJ99_RS11575 (2343944) | 2343944..2344327 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| QQJ99_RS11580 (2344347) | 2344347..2344781 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| QQJ99_RS11585 (2344993) | 2344993..2345658 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| QQJ99_RS11590 (2345683) | 2345683..2346873 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| QQJ99_RS11595 (2347023) | 2347023..2348138 | - | 1116 | WP_000258591.1 | putative protein YneK | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|