MGE detailed information
MGE type: Genomic_island MGE length: 28187 bp
Accession: NZ_AP027946 Location: 3714189..3742375 Organism: Escherichia coli strain VE-F10 Replicon: chromosome
Accession: NZ_AP027946 Location: 3714189..3742375 Organism: Escherichia coli strain VE-F10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| - (3709777) | 3709777..3709857 | - | 81 | NuclAT_11 | - | - |
| - (3709777) | 3709777..3709857 | - | 81 | NuclAT_11 | - | - |
| - (3709777) | 3709777..3709857 | - | 81 | NuclAT_11 | - | - |
| - (3709777) | 3709777..3709857 | - | 81 | NuclAT_11 | - | - |
| QQK65_RS17960 (3710453) | 3710453..3710911 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| QQK65_RS17965 (3711172) | 3711172..3712629 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| QQK65_RS17970 (3712686) | 3712686..3713207 | - | 522 | Protein_3513 | peptide chain release factor H | - |
| QQK65_RS17975 (3713203) | 3713203..3713409 | - | 207 | Protein_3514 | RtcB family protein | - |
| QQK65_RS17980 (3713727) | 3713727..3714179 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| QQK65_RS17985 (3714189) | 3714189..3714587 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| QQK65_RS17990 (3714590) | 3714590..3714883 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| QQK65_RS17995 (3714935) | 3714935..3715990 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| QQK65_RS18000 (3716061) | 3716061..3716846 | - | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| QQK65_RS18005 (3716818) | 3716818..3718530 | + | 1713 | Protein_3520 | Flagellar biosynthesis protein FlhA | VF |
| QQK65_RS18010 (3718754) | 3718754..3719251 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| QQK65_RS18015 (3719427) | 3719427..3720176 | - | 750 | WP_000056849.1 | Murein DD-endopeptidase MepH | VF |
| QQK65_RS18020 (3720386) | 3720386..3720646 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| QQK65_RS18025 (3720649) | 3720649..3720927 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| QQK65_RS18030 (3721083) | 3721083..3721823 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| QQK65_RS18035 (3721794) | 3721794..3722561 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| QQK65_RS18040 (3722767) | 3722767..3723345 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| QQK65_RS18045 (3723585) | 3723585..3726007 | + | 2423 | Protein_3528 | Acyl-coenzyme A dehydrogenase | VF |
| QQK65_RS18050 (3726050) | 3726050..3726496 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| QQK65_RS18055 (3726677) | 3726677..3727447 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| QQK65_RS18060 (3727488) | 3727488..3728624 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| QQK65_RS18065 (3729055) | 3729055..3729447 | - | 393 | WP_001101839.1 | hypothetical protein | - |
| QQK65_RS18070 (3729425) | 3729425..3733513 | - | 4089 | Protein_3533 | Protein RhsD | VF |
| QQK65_RS18075 (3733528) | 3733528..3734829 | + | 1302 | Protein_3534 | hypothetical protein | VF |
| QQK65_RS18080 (3734840) | 3734840..3736289 | + | 1450 | Protein_3535 | hypothetical protein | VF |
| QQK65_RS18085 (3736216) | 3736216..3736698 | + | 483 | WP_001284199.1 | Major exported protein | VF |
| QQK65_RS18090 (3736742) | 3736742..3737656 | + | 915 | WP_000908066.1 | hypothetical protein | - |
| QQK65_RS18095 (3737666) | 3737666..3738145 | + | 480 | WP_001236645.1 | protein YkfM | - |
| QQK65_RS18100 (3738282) | 3738282..3739067 | - | 786 | WP_001086141.1 | lipoprotein | - |
| QQK65_RS18110 (3739604) | 3739604..3740335 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| QQK65_RS18115 (3740400) | 3740400..3740867 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| QQK65_RS18120 (3740864) | 3740864..3741586 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| QQK65_RS18125 (3741620) | 3741620..3742375 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| QQK65_RS18130 (3742447) | 3742447..3743805 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| QQK65_RS18135 (3743853) | 3743853..3744449 | - | 597 | Protein_3545 | methyltransferase domain-containing protein | - |
| QQK65_RS18140 (3744480) | 3744480..3745280 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| QQK65_RS18145 (3745521) | 3745521..3746435 | + | 915 | WP_000648572.1 | DNA-binding transcriptional regulator YafC | - |
| QQK65_RS18150 (3746432) | 3746432..3747235 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|