MGE detailed information
MGE type: Prophage MGE length: 45272 bp
Accession: NZ_AP027440 Location: 282871..328142 Organism: Escherichia coli strain EC556 isolate EC556 Replicon: chromosome
Accession: NZ_AP027440 Location: 282871..328142 Organism: Escherichia coli strain EC556 isolate EC556 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE77_RS02810 () | 279595..280047 | + | 453 | WP_032141314.1 | dihydroneopterin triphosphate diphosphatase | - |
| QUE77_RS02815 () | 280076..280816 | + | 741 | WP_000907234.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| QUE77_RS02820 () | 280851..281372 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| QUE77_RS02825 () | 281374..281976 | - | 603 | WP_001024929.1 | YebB family permuted papain-like enzyme | - |
| QUE77_RS02830 () | 282047..282112 | + | 66 | WP_072093883.1 | stress response small protein YobI | - |
| QUE77_RS02835 () | 282251..282862 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| QUE77_RS02840 () | 282871..283881 | + | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| QUE77_RS02845 () | 284029..284814 | - | 786 | WP_000571471.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| QUE77_RS02850 () | 284811..285566 | - | 756 | WP_024226334.1 | Zinc import ATP-binding protein ZnuC | VF |
| QUE77_RS02855 () | 285645..286577 | + | 933 | WP_001376899.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| QUE77_RS02860 () | 286593..287915 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| QUE77_RS02865 () | 288035..289006 | + | 972 | WP_000448381.1 | Lipid A biosynthesis myristoyltransferase | VF |
| QUE77_RS02870 () | 289138..290580 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| QUE77_RS02875 () | 290708..291577 | - | 870 | WP_032353151.1 | DNA-binding transcriptional regulator HexR | - |
| QUE77_RS02880 () | 291915..293390 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| QUE77_RS02885 () | 293625..295436 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| QUE77_RS02890 () | 295473..296114 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| QUE77_RS02895 () | 296169..297347 | - | 1179 | WP_021517157.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| QUE77_RS02900 () | 297481..297771 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| QUE77_RS02905 () | 297838..298194 | + | 357 | WP_001295500.1 | protein YebF | - |
| QUE77_RS02910 () | 298521..299180 | + | 660 | WP_063086343.1 | tellurite resistance TerB family protein | - |
| QUE77_RS02915 () | 299344..300513 | - | 1170 | WP_096169040.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| QUE77_RS02920 () | 300570..300995 | + | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| QUE77_RS02925 () | 301152..303212 | + | 2061 | WP_063086345.1 | oligopeptidase B | - |
| QUE77_RS02930 () | 303209..303871 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| QUE77_RS02935 () | 303895..304551 | - | 657 | WP_000011651.1 | carbon-nitrogen hydrolase family protein YobB | - |
| QUE77_RS02940 () | 304653..304883 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| QUE77_RS02945 () | 305022..305396 | + | 375 | WP_000204705.1 | CopC domain-containing protein YobA | - |
| QUE77_RS02950 () | 305400..306272 | + | 873 | WP_000879330.1 | copper homeostasis membrane protein CopD | - |
| QUE77_RS02955 () | 306285..306626 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - | 306654..306925 | - | 272 | - | - | Antitoxin Detail |
| - | 306784..306887 | + | 104 | - | - | Toxin Detail |
| QUE77_RS02960 () | 307022..307678 | + | 657 | WP_001520704.1 | protein-serine/threonine phosphatase | - |
| QUE77_RS02965 () | 307679..307870 | - | 192 | WP_001296140.1 | YebW family protein | - |
| QUE77_RS02970 () | 307975..308211 | - | 237 | WP_001295499.1 | YebV family protein | - |
| QUE77_RS02975 () | 308329..309768 | - | 1440 | WP_024166480.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| QUE77_RS02980 () | 309848..312481 | - | 2634 | WP_001306757.1 | hypothetical protein | VF |
| QUE77_RS02985 () | 312450..313733 | - | 1284 | WP_025210564.1 | membrane integrity lipid transport subunit YebS | - |
| QUE77_RS02990 () | 313863..314360 | + | 498 | WP_001043884.1 | L-methionine (R)-S-oxide reductase | - |
| QUE77_RS02995 () | 314457..315155 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| QUE77_RS03000 () | 315175..317223 | + | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| QUE77_RS03005 () | 317415..318296 | + | 882 | WP_000984517.1 | protease HtpX | - |
| QUE77_RS03010 () | 318342..319715 | - | 1374 | WP_096169039.1 | MFS transporter | - |
| QUE77_RS03015 () | 319892..320683 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| QUE77_RS03020 () | 320827..321066 | - | 240 | WP_001211011.1 | YobH family protein | - |
| QUE77_RS03025 () | 321225..321368 | + | 144 | WP_063086347.1 | PhoP/PhoQ regulator MgrB | - |
| QUE77_RS03030 () | 321443..321730 | + | 288 | WP_001006866.1 | YebO family protein | - |
| QUE77_RS03035 () | 322400..322543 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| QUE77_RS03040 () | 322556..322765 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| QUE77_RS03045 () | 322931..323740 | + | 810 | WP_000010122.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| QUE77_RS03050 () | 323737..324303 | - | 567 | WP_001306762.1 | manganese efflux pump MntP | - |
| QUE77_RS03055 () | 324732..325190 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| QUE77_RS03060 () | 325245..326096 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| QUE77_RS03065 () | 326109..326909 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
| QUE77_RS03070 () | 326972..327541 | - | 570 | Protein_336 | mannose/fructose/sorbose PTS transporter subunit IIB | - |
| QUE77_RS03075 () | 327684..328142 | + | 459 | WP_000526135.1 | IS200-IS605 family transposase IS200C | Transposase |
| QUE77_RS03080 () | 328250..328654 | - | 405 | Protein_338 | mannose/fructose/sorbose PTS transporter subunit IIA | - |
| QUE77_RS03085 () | 328971..329129 | + | 159 | WP_274538752.1 | protein YoaL | - |
| QUE77_RS03090 () | 329117..330673 | + | 1557 | WP_000394983.1 | CNNM family cation transport protein YoaE | - |
| QUE77_RS03095 () | 330677..332275 | - | 1599 | WP_063086348.1 | cyclic diguanylate phosphodiesterase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|