MGE detailed information
MGE type: Conjugative plasmid MGE length: 88955 bp
Accession: NZ_AP027439 Location: 1..88955 Organism: Escherichia coli strain EC556 isolate EC556 Replicon: plasmid pEC556_1
Accession: NZ_AP027439 Location: 1..88955 Organism: Escherichia coli strain EC556 isolate EC556 Replicon: plasmid pEC556_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE77_RS00850 (60) | 60..452 | - | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| QUE77_RS00855 (457) | 457..1428 | - | 972 | WP_001103690.1 | plasmid segregation protein ParM | - |
| QUE77_RS00860 (1657) | 1657..2301 | + | 645 | WP_054170944.1 | division plane positioning ATPase MipZ | - |
| QUE77_RS00865 (2295) | 2295..2570 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| QUE77_RS00870 (2708) | 2708..3490 | - | 783 | WP_054170945.1 | site-specific integrase | - |
| QUE77_RS00875 (3558) | 3558..4166 | - | 609 | WP_054170947.1 | hypothetical protein | - |
| QUE77_RS00880 (4236) | 4236..4586 | - | 351 | WP_286338360.1 | hypothetical protein | - |
| QUE77_RS00885 (5157) | 5157..5738 | + | 582 | WP_001460356.1 | hypothetical protein | - |
| QUE77_RS00890 (5918) | 5918..6253 | + | 336 | WP_000628093.1 | hypothetical protein | - |
| QUE77_RS00895 (6241) | 6241..6888 | + | 648 | WP_001460357.1 | hypothetical protein | - |
| QUE77_RS00900 (7059) | 7059..7343 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| QUE77_RS00905 (7363) | 7363..8496 | - | 1134 | WP_001460358.1 | DUF3800 domain-containing protein | - |
| QUE77_RS00910 (9015) | 9015..9305 | - | 291 | WP_001229373.1 | hypothetical protein | - |
| QUE77_RS00915 (9305) | 9305..10435 | - | 1131 | WP_000542417.1 | DUF4238 domain-containing protein | - |
| QUE77_RS00920 (10465) | 10465..11568 | - | 1104 | WP_001127573.1 | nucleotide-binding protein | - |
| QUE77_RS00925 (11897) | 11897..12154 | + | 258 | WP_000371888.1 | hypothetical protein | - |
| QUE77_RS00930 (12375) | 12375..12563 | + | 189 | WP_000957857.1 | hypothetical protein | - |
| QUE77_RS00935 (12573) | 12573..13772 | + | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| QUE77_RS00940 (14983) | 14983..16014 | - | 1032 | WP_000907868.1 | plasmid replication initiator RepA | - |
| QUE77_RS00945 (16971) | 16971..17129 | + | 159 | Protein_20 | ash family protein | - |
| QUE77_RS00950 (17167) | 17167..17454 | + | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| QUE77_RS00955 (17896) | 17896..18429 | + | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| QUE77_RS00960 (18683) | 18683..19366 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| QUE77_RS00965 (20319) | 20319..20573 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| QUE77_RS00970 (20616) | 20616..21068 | + | 453 | WP_063102630.1 | hypothetical protein | - |
| QUE77_RS00975 (21742) | 21742..22809 | + | 1068 | WP_286338361.1 | hypothetical protein | VF |
| QUE77_RS00980 (22809) | 22809..23246 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| QUE77_RS00985 (23260) | 23260..24942 | + | 1683 | WP_063119479.1 | Outer membrane lipoprotein BfpB | VF |
| QUE77_RS00990 (24935) | 24935..26230 | + | 1296 | WP_063102674.1 | type 4b pilus protein PilO2 | - |
| QUE77_RS00995 (26217) | 26217..26669 | + | 453 | WP_001247870.1 | hypothetical protein | VF |
| QUE77_RS01000 (26680) | 26680..28233 | + | 1554 | WP_001384241.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| QUE77_RS01005 (28246) | 28246..29343 | + | 1098 | WP_001492931.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| QUE77_RS01010 (29361) | 29361..29975 | + | 615 | WP_063102676.1 | hypothetical protein | VF |
| QUE77_RS01015 (29985) | 29985..30545 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| QUE77_RS01020 (30530) | 30530..31186 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| QUE77_RS01025 (31186) | 31186..32400 | + | 1215 | WP_286338362.1 | hypothetical protein | VF |
| QUE77_RS01030 (32476) | 32476..32736 | - | 261 | WP_286338363.1 | hypothetical protein | - |
| QUE77_RS01035 (33754) | 33754..34908 | + | 1155 | WP_158138222.1 | site-specific integrase | - |
| QUE77_RS01040 (35059) | 35059..35883 | + | 825 | WP_286338240.1 | conjugal transfer protein TraE | - |
| QUE77_RS01045 (35968) | 35968..37170 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| QUE77_RS01050 (37230) | 37230..37814 | + | 585 | WP_000977525.1 | histidine phosphatase family protein | - |
| QUE77_RS01055 (38209) | 38209..38667 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| QUE77_RS01060 (38664) | 38664..39482 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| QUE77_RS01065 (39479) | 39479..40627 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| QUE77_RS01070 (40624) | 40624..40914 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| QUE77_RS01075 (40929) | 40929..41480 | + | 552 | WP_000014584.1 | Phospholipase D | VF |
| QUE77_RS01080 (41569) | 41569..45336 | + | 3768 | WP_286338239.1 | DUF5710 domain-containing protein | - |
| QUE77_RS01085 (45354) | 45354..45701 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QUE77_RS01090 (45698) | 45698..46390 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| QUE77_RS01095 (46401) | 46401..47384 | + | 984 | WP_001191879.1 | hypothetical protein | VF |
| QUE77_RS01100 (47387) | 47387..48676 | + | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| QUE77_RS01105 (48676) | 48676..49380 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| QUE77_RS01110 (49380) | 49380..49907 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QUE77_RS01115 (49958) | 49958..50362 | + | 405 | WP_063119512.1 | IncI1-type conjugal transfer protein TraR | - |
| QUE77_RS01120 (50426) | 50426..50614 | + | 189 | WP_124983585.1 | putative conjugal transfer protein TraS | - |
| QUE77_RS01125 (50598) | 50598..51398 | + | 801 | WP_060527642.1 | IncI1-type conjugal transfer protein TraT | - |
| QUE77_RS01130 (51488) | 51488..54532 | + | 3045 | WP_001024776.1 | IncI1-type conjugal transfer protein TraU | - |
| QUE77_RS01135 (54532) | 54532..55146 | + | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| QUE77_RS01140 (55113) | 55113..56315 | + | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| QUE77_RS01145 (56344) | 56344..56928 | + | 585 | WP_060527640.1 | IncI1-type conjugal transfer protein TraX | - |
| QUE77_RS01150 (57025) | 57025..58170 | + | 1146 | WP_286338355.1 | DotA/TraY family protein | - |
| QUE77_RS01155 (60087) | 60087..60296 | - | 210 | WP_286338356.1 | HEAT repeat domain-containing protein | - |
| QUE77_RS01160 (60705) | 60705..60881 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| QUE77_RS01165 (60946) | 60946..61041 | - | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| QUE77_RS01170 (61794) | 61794..62045 | + | 252 | WP_001291964.1 | hypothetical protein | - |
| QUE77_RS01175 (62117) | 62117..62269 | - | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| - (62319) | 62319..62381 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (62319) | 62319..62381 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (62319) | 62319..62381 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (62319) | 62319..62381 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| QUE77_RS01180 (62561) | 62561..63769 | + | 1209 | WP_286338357.1 | IncI1-type conjugal transfer protein TrbA | - |
| QUE77_RS01185 (63788) | 63788..64859 | + | 1072 | Protein_68 | IncI1-type conjugal transfer protein TrbB | - |
| QUE77_RS01190 (64852) | 64852..67144 | + | 2293 | Protein_69 | F-type conjugative transfer protein TrbC | - |
| QUE77_RS01195 (67181) | 67181..69881 | - | 2701 | Protein_70 | hypothetical protein | Relaxase |
| QUE77_RS01200 (69892) | 69892..70224 | - | 333 | WP_137653293.1 | plasmid mobilization protein MobA | - |
| QUE77_RS01205 (70463) | 70463..70798 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| QUE77_RS01210 (70884) | 70884..71732 | - | 849 | WP_054170926.1 | DUF4942 domain-containing protein | - |
| QUE77_RS01215 (72312) | 72312..72563 | + | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| QUE77_RS01220 (72594) | 72594..72827 | - | 234 | WP_162983412.1 | hypothetical protein | - |
| QUE77_RS01225 (72827) | 72827..73729 | - | 903 | WP_054170928.1 | Recombination-promoting nuclease RpnA | VF |
| QUE77_RS01230 (73794) | 73794..74060 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| QUE77_RS01235 (74153) | 74153..74587 | - | 435 | WP_000218858.1 | hypothetical protein | - |
| QUE77_RS01240 (75316) | 75316..75816 | - | 501 | WP_000117618.1 | antirestriction protein ArdA | - |
| QUE77_RS01245 (76280) | 76280..76876 | - | 597 | WP_000978009.1 | hypothetical protein | - |
| QUE77_RS01250 (76873) | 76873..77592 | - | 720 | WP_001276263.1 | plasmid SOS inhibition protein A | - |
| QUE77_RS01255 (77589) | 77589..78023 | - | 435 | WP_001535709.1 | conjugation system SOS inhibitor PsiB | - |
| QUE77_RS01260 (78078) | 78078..80036 | - | 1959 | WP_123001127.1 | ParB/RepB/Spo0J family partition protein | - |
| QUE77_RS01265 (80095) | 80095..80330 | - | 236 | Protein_84 | DUF905 family protein | - |
| QUE77_RS01270 (80388) | 80388..80916 | - | 529 | Protein_85 | single-stranded DNA-binding protein | - |
| QUE77_RS01275 (81285) | 81285..81353 | + | 69 | Protein_86 | pilus protein | - |
| QUE77_RS01280 (81686) | 81686..81877 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| QUE77_RS01285 (81874) | 81874..82296 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| QUE77_RS01290 (82343) | 82343..82768 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| QUE77_RS01295 (83188) | 83188..83946 | - | 759 | WP_286338364.1 | hypothetical protein | - |
| QUE77_RS01300 (83997) | 83997..84466 | - | 470 | Protein_91 | DUF1380 family protein | - |
| QUE77_RS01305 (84447) | 84447..84668 | - | 222 | WP_001104879.1 | hypothetical protein | - |
| QUE77_RS01310 (84669) | 84669..85352 | - | 684 | WP_000086148.1 | DNA methylase | - |
| QUE77_RS01315 (85428) | 85428..85733 | - | 306 | WP_286338358.1 | hypothetical protein | - |
| QUE77_RS01320 (85737) | 85737..86639 | - | 903 | WP_001302618.1 | DUF1281 domain-containing protein | - |
| QUE77_RS01325 (87057) | 87057..87305 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| QUE77_RS01330 (87302) | 87302..87739 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|