MGE detailed information
MGE type: Prophage MGE length: 37372 bp
Accession: NZ_AP027436 Location: 597951..635322 Organism: Escherichia coli strain EC571 isolate EC571 Replicon: chromosome
Accession: NZ_AP027436 Location: 597951..635322 Organism: Escherichia coli strain EC571 isolate EC571 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE57_RS04440 (593851) | 593851..595071 | + | 1221 | WP_000225257.1 | DNA-binding transcriptional repressor Mlc | - |
| QUE57_RS04445 (595196) | 595196..595891 | + | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| QUE57_RS04450 (595844) | 595844..597136 | - | 1293 | WP_071591524.1 | voltage-gated ClC-type chloride channel ClcB | - |
| QUE57_RS04455 (597294) | 597294..597908 | - | 615 | WP_063085996.1 | Tat proofreading chaperone DmsD | - |
| QUE57_RS04460 (597951) | 597951..598805 | - | 855 | WP_063085994.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| QUE57_RS04465 (598807) | 598807..599424 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| QUE57_RS04470 (599435) | 599435..601858 | - | 2424 | WP_096169036.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| QUE57_RS04475 (601919) | 601919..604344 | - | 2426 | Protein_617 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| QUE57_RS04480 (604543) | 604543..604848 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| QUE57_RS04485 (604956) | 604956..605666 | + | 711 | WP_001445899.1 | YnfC family lipoprotein | - |
| QUE57_RS04490 (605669) | 605669..606229 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| QUE57_RS04495 (606264) | 606264..606605 | - | 342 | WP_000705205.1 | DUF1283 family protein | - |
| QUE57_RS04500 (606740) | 606740..607066 | + | 327 | WP_001314753.1 | YnfA family protein | - |
| QUE57_RS04505 (607272) | 607272..608486 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| QUE57_RS04510 (608498) | 608498..609517 | + | 1020 | WP_000836035.1 | Zn-dependent oxidoreductase | - |
| QUE57_RS04515 (609705) | 609705..610985 | - | 1281 | WP_286338305.1 | DUF3596 domain-containing protein | - |
| QUE57_RS04520 (611020) | 611020..611271 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| QUE57_RS04525 (611344) | 611344..613815 | - | 2472 | WP_000048342.1 | exonuclease | - |
| QUE57_RS04530 (613908) | 613908..614099 | - | 192 | WP_063085989.1 | lysis protein YdfD | - |
| QUE57_RS04535 (614096) | 614096..614284 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| QUE57_RS04540 (614852) | 614852..615070 | - | 219 | WP_001171942.1 | protein YdfC | - |
| QUE57_RS04545 (615100) | 615100..615228 | - | 129 | WP_000344964.1 | protein YdfB | - |
| QUE57_RS04550 (615230) | 615230..615385 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| QUE57_RS04555 (615552) | 615552..615959 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| QUE57_RS04560 (616043) | 616043..616273 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| QUE57_RS04565 (616257) | 616257..616442 | + | 186 | Protein_635 | hypothetical protein | - |
| QUE57_RS04570 (616440) | 616440..616580 | + | 141 | Protein_636 | DUF977 family protein | - |
| QUE57_RS04575 (616577) | 616577..617066 | + | 490 | Protein_637 | class I SAM-dependent methyltransferase | - |
| QUE57_RS04580 (617544) | 617544..617965 | + | 422 | Protein_638 | hypothetical protein | - |
| QUE57_RS04585 (618621) | 618621..619643 | + | 1023 | Protein_639 | ISNCY family transposase | - |
| QUE57_RS04590 (619764) | 619764..619913 | + | 150 | WP_011443592.1 | protein YdfW | - |
| QUE57_RS04595 (620375) | 620375..620707 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| QUE57_RS04600 (620910) | 620910..621215 | - | 306 | WP_001326990.1 | protein YdfV | - |
| QUE57_RS04605 (621240) | 621240..621479 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QUE57_RS04610 (621479) | 621479..621766 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QUE57_RS04615 (621838) | 621838..621993 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QUE57_RS04620 (622210) | 622210..622461 | + | 252 | WP_000980994.1 | protein Rem | - |
| QUE57_RS04625 (622528) | 622528..622806 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| QUE57_RS04630 (622808) | 622808..623857 | + | 1050 | WP_063085032.1 | DUF968 domain-containing protein | - |
| QUE57_RS04635 (623871) | 623871..624623 | + | 753 | WP_001047135.1 | antitermination protein | - |
| QUE57_RS04640 (624901) | 624901..624990 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| QUE57_RS04645 (625045) | 625045..625257 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| QUE57_RS04650 (625558) | 625558..625773 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| QUE57_RS04655 (626137) | 626137..626307 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| QUE57_RS04660 (626527) | 626527..626742 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| QUE57_RS04665 (626747) | 626747..627058 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| QUE57_RS04670 (627055) | 627055..627588 | + | 534 | WP_001092971.1 | lysozyme | - |
| QUE57_RS04675 (627585) | 627585..628082 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| QUE57_RS04680 (628445) | 628445..628657 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| QUE57_RS04685 (628668) | 628668..628856 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| QUE57_RS04690 (628859) | 628859..628924 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| QUE57_RS04695 (628929) | 628929..629159 | + | 231 | WP_000720962.1 | protein YnfN | - |
| QUE57_RS04700 (629331) | 629331..629504 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| QUE57_RS04705 (629656) | 629656..630066 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| QUE57_RS04710 (630124) | 630124..630357 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| QUE57_RS04715 (630746) | 630746..631291 | + | 546 | WP_000453616.1 | DNA-packaging protein | - |
| QUE57_RS04720 (631266) | 631266..631574 | + | 309 | Protein_666 | phage terminase large subunit family protein | - |
| QUE57_RS04725 (631563) | 631563..632015 | + | 453 | Protein_667 | tail fiber assembly protein | - |
| QUE57_RS04730 (632113) | 632113..632703 | - | 591 | WP_000086525.1 | recombinase family protein | - |
| QUE57_RS04735 (633020) | 633020..633253 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QUE57_RS04740 (633322) | 633322..633435 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QUE57_RS04745 (634039) | 634039..635322 | + | 1284 | Protein_671 | MHS family MFS transporter YdfJ | - |
| QUE57_RS04750 (635412) | 635412..636872 | + | 1461 | WP_000527819.1 | mannitol dehydrogenase family protein | - |
| QUE57_RS04755 (636908) | 636908..637111 | - | 204 | WP_063085277.1 | putative selenium delivery protein YdfZ | - |
| QUE57_RS04760 (637288) | 637288..637974 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QUE57_RS04765 (638063) | 638063..638809 | - | 747 | WP_096169134.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|