MGE detailed information
MGE type: Prophage MGE length: 39851 bp
Accession: NZ_AP027404 Location: 2993394..3033244 Organism: Escherichia coli strain EC416 isolate EC416 Replicon: chromosome
Accession: NZ_AP027404 Location: 2993394..3033244 Organism: Escherichia coli strain EC416 isolate EC416 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE37_RS15545 (2990769) | 2990769..2993195 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| QUE37_RS15550 (2993394) | 2993394..2993699 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| QUE37_RS15555 (2993807) | 2993807..2994517 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| QUE37_RS15560 (2994520) | 2994520..2995080 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| QUE37_RS15565 (2995115) | 2995115..2995456 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| QUE37_RS15570 (2995591) | 2995591..2995917 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| QUE37_RS15575 (2996123) | 2996123..2997337 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| QUE37_RS15580 (2997349) | 2997349..2998368 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| QUE37_RS15585 (2998556) | 2998556..2999836 | - | 1281 | WP_286347740.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| QUE37_RS15590 (2999871) | 2999871..3000122 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| QUE37_RS15595 (3000195) | 3000195..3002177 | - | 1983 | Protein_2849 | 3'-5' exoribonuclease | - |
| QUE37_RS15600 (3002167) | 3002167..3002418 | + | 252 | Protein_2850 | DUF977 family protein | - |
| QUE37_RS15605 (3002415) | 3002415..3002904 | + | 490 | Protein_2851 | class I SAM-dependent methyltransferase | - |
| QUE37_RS15610 (3003382) | 3003382..3003803 | + | 422 | Protein_2852 | hypothetical protein | - |
| QUE37_RS15615 (3004459) | 3004459..3005481 | + | 1023 | Protein_2853 | ISNCY family transposase ISCARN112 | Transposase |
| QUE37_RS15620 (3005602) | 3005602..3005751 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| QUE37_RS15625 (3006188) | 3006188..3006520 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| QUE37_RS15630 (3006723) | 3006723..3007028 | - | 306 | WP_001326990.1 | protein YdfV | - |
| QUE37_RS15635 (3007053) | 3007053..3007292 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QUE37_RS15640 (3007292) | 3007292..3007579 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QUE37_RS15645 (3007651) | 3007651..3007806 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QUE37_RS15650 (3008023) | 3008023..3008274 | + | 252 | WP_000980994.1 | protein Rem | - |
| QUE37_RS15655 (3008341) | 3008341..3008619 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| QUE37_RS15660 (3008621) | 3008621..3009670 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| QUE37_RS15665 (3009684) | 3009684..3010436 | + | 753 | WP_001047135.1 | antitermination protein | - |
| QUE37_RS15670 (3010714) | 3010714..3010803 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| QUE37_RS15675 (3010858) | 3010858..3011070 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| QUE37_RS15680 (3011371) | 3011371..3011586 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| QUE37_RS15685 (3011950) | 3011950..3012120 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| QUE37_RS15690 (3012340) | 3012340..3012555 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| QUE37_RS15695 (3012560) | 3012560..3012871 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| QUE37_RS15700 (3012868) | 3012868..3013401 | + | 534 | WP_001092971.1 | lysozyme | - |
| QUE37_RS15705 (3013398) | 3013398..3013895 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| QUE37_RS15710 (3014258) | 3014258..3014470 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| QUE37_RS15715 (3014481) | 3014481..3014669 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| QUE37_RS15720 (3014672) | 3014672..3014737 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| QUE37_RS15725 (3014742) | 3014742..3014972 | + | 231 | WP_000720962.1 | protein YnfN | - |
| QUE37_RS15730 (3015144) | 3015144..3015317 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| QUE37_RS15735 (3015469) | 3015469..3015879 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| QUE37_RS15740 (3015937) | 3015937..3016170 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| QUE37_RS15745 (3016559) | 3016559..3016816 | + | 258 | WP_001310828.1 | terminase small subunit | - |
| QUE37_RS15750 (3016791) | 3016791..3018050 | + | 1260 | Protein_2880 | phage tail protein | - |
| QUE37_RS15755 (3018137) | 3018137..3018349 | + | 213 | Protein_2881 | hypothetical protein | - |
| QUE37_RS15760 (3018349) | 3018349..3018924 | + | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| QUE37_RS15765 (3019022) | 3019022..3019612 | - | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QUE37_RS15770 (3019929) | 3019929..3020162 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QUE37_RS15775 (3020231) | 3020231..3020344 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QUE37_RS15780 (3020948) | 3020948..3022231 | + | 1284 | Protein_2886 | MHS family MFS transporter YdfJ | - |
| QUE37_RS15785 (3022320) | 3022320..3023780 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| QUE37_RS15790 (3023815) | 3023815..3024018 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| QUE37_RS15795 (3024195) | 3024195..3024881 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QUE37_RS15800 (3024970) | 3024970..3025716 | - | 747 | WP_000636571.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| QUE37_RS15805 (3025853) | 3025853..3027898 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| QUE37_RS15810 (3027942) | 3027942..3028460 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| QUE37_RS15815 (3028736) | 3028736..3029128 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| QUE37_RS15820 (3029383) | 3029383..3030273 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| QUE37_RS15825 (3030388) | 3030388..3030492 | - | 105 | WP_211180496.1 | protein MgtT | - |
| QUE37_RS15830 (3030492) | 3030492..3030587 | - | 96 | WP_000901367.1 | protein MgtS | - |
| QUE37_RS15835 (3030714) | 3030714..3031901 | - | 1188 | WP_001054183.1 | efflux MFS transporter YdeE | - |
| QUE37_RS15840 (3032096) | 3032096..3032995 | + | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| QUE37_RS15845 (3033026) | 3033026..3033244 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| QUE37_RS15850 (3033276) | 3033276..3033659 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| QUE37_RS15855 (3033679) | 3033679..3034113 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| QUE37_RS15860 (3034325) | 3034325..3034990 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| QUE37_RS15865 (3035015) | 3035015..3036205 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| QUE37_RS15870 (3036355) | 3036355..3037470 | - | 1116 | WP_000258599.1 | putative protein YneK | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|