MGE detailed information
MGE type: Conjugative plasmid MGE length: 60729 bp
Accession: NZ_AP027260 Location: 1..60729 Organism: Escherichia coli strain JNE151685 Replicon: plasmid pJNE151685-2
Accession: NZ_AP027260 Location: 1..60729 Organism: Escherichia coli strain JNE151685 Replicon: plasmid pJNE151685-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE29_RS25255 () | 126..845 | + | 720 | WP_001276237.1 | plasmid SOS inhibition protein A | - |
| QUE29_RS25260 () | 842..1156 | + | 315 | WP_000872086.1 | hypothetical protein | - |
| - () | 1105..1298 | + | 194 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1105..1298 | + | 194 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1105..1298 | + | 194 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1105..1298 | + | 194 | NuclAT_0 | - | Antitoxin Detail |
| - | 1108..1298 | - | 191 | - | - | Antitoxin Detail |
| QUE29_RS25265 () | 1306..1458 | + | 153 | Protein_3 | DUF5431 family protein | - |
| QUE29_RS25270 () | 1403..1525 | + | 123 | WP_223200913.1 | Hok/Gef family protein | Toxin Detail |
| QUE29_RS25275 () | 1979..2152 | - | 174 | Protein_5 | hypothetical protein | - |
| QUE29_RS25280 () | 2452..2754 | + | 303 | WP_001272236.1 | hypothetical protein | - |
| QUE29_RS25285 () | 2911..3198 | + | 288 | WP_000107543.1 | hypothetical protein | - |
| QUE29_RS25290 () | 3317..4138 | + | 822 | WP_001234499.1 | DUF932 domain-containing protein | - |
| QUE29_RS25295 () | 4434..5036 | - | 603 | WP_077539848.1 | hypothetical protein | VF |
| QUE29_RS25300 () | 5357..5740 | + | 384 | WP_001585112.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QUE29_RS25305 () | 5934..6581 | + | 648 | WP_096889344.1 | transcriptional regulator TraJ family protein | - |
| QUE29_RS25310 () | 6700..6927 | + | 228 | WP_000589554.1 | conjugal transfer relaxosome protein TraY | - |
| QUE29_RS25315 () | 6962..7315 | + | 354 | WP_021521309.1 | type IV conjugative transfer system pilin TraA | - |
| QUE29_RS25320 () | 7330..7641 | + | 312 | WP_000012099.1 | type IV conjugative transfer system protein TraL | - |
| QUE29_RS25325 () | 7663..8229 | + | 567 | WP_000399759.1 | type IV conjugative transfer system protein TraE | - |
| QUE29_RS25330 () | 8216..8944 | + | 729 | WP_021573902.1 | type-F conjugative transfer system secretin TraK | - |
| QUE29_RS25335 () | 8944..10374 | + | 1431 | WP_000146622.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QUE29_RS25340 () | 10364..10951 | + | 588 | WP_021521307.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QUE29_RS25345 () | 10938..11258 | + | 321 | WP_250216841.1 | conjugal transfer protein TrbD | - |
| QUE29_RS25350 () | 11251..11502 | + | 252 | WP_001038336.1 | conjugal transfer protein TrbG | - |
| QUE29_RS25355 () | 11499..12014 | + | 516 | WP_137465261.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QUE29_RS25360 () | 12149..12370 | + | 222 | WP_001278980.1 | conjugal transfer protein TraR | - |
| QUE29_RS25365 () | 12530..15157 | + | 2628 | WP_137465260.1 | type IV secretion system protein TraC | - |
| QUE29_RS25370 () | 15154..15540 | + | 387 | WP_028985434.1 | type-F conjugative transfer system protein TrbI | - |
| QUE29_RS25375 () | 15537..16169 | + | 633 | WP_044804161.1 | type-F conjugative transfer system protein TraW | - |
| QUE29_RS25380 () | 16166..17158 | + | 993 | WP_000817328.1 | conjugal transfer pilus assembly protein TraU | - |
| QUE29_RS25385 () | 17179..17358 | + | 180 | WP_000970212.1 | hypothetical protein | - |
| QUE29_RS25390 () | 17355..17594 | - | 240 | WP_001066128.1 | hypothetical protein | - |
| QUE29_RS25395 () | 17787..18425 | + | 639 | WP_001035177.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QUE29_RS25400 () | 18422..18802 | + | 381 | WP_000056343.1 | hypothetical protein | - |
| QUE29_RS25405 () | 18896..20800 | + | 1905 | WP_286347716.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QUE29_RS25410 () | 20814..21071 | + | 258 | WP_000864355.1 | conjugal transfer protein TrbE | - |
| QUE29_RS25415 () | 21064..21807 | + | 744 | WP_001030373.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QUE29_RS25420 () | 21821..22162 | + | 342 | WP_000556797.1 | conjugal transfer protein TrbA | - |
| QUE29_RS25425 () | 22558..22848 | + | 291 | WP_021521297.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QUE29_RS25430 () | 22835..23380 | + | 546 | WP_286347717.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QUE29_RS25435 () | 23310..23657 | + | 348 | WP_071531747.1 | P-type conjugative transfer protein TrbJ | - |
| QUE29_RS25440 () | 23638..24030 | + | 393 | WP_000660704.1 | F-type conjugal transfer protein TrbF | - |
| QUE29_RS25445 () | 24017..25390 | + | 1374 | WP_000944332.1 | conjugal transfer pilus assembly protein TraH | - |
| QUE29_RS25450 () | 25387..28233 | + | 2847 | WP_050878059.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QUE29_RS25455 () | 28230..28739 | + | 510 | WP_000628111.1 | conjugal transfer entry exclusion protein TraS | - |
| QUE29_RS25460 () | 28753..29484 | + | 732 | WP_033800894.1 | conjugal transfer complement resistance protein TraT | - |
| QUE29_RS25465 () | 29556..30167 | + | 612 | WP_000908442.1 | hypothetical protein | - |
| QUE29_RS25470 () | 30448..32718 | + | 2271 | WP_286347712.1 | type IV conjugative transfer system coupling protein TraD | - |
| QUE29_RS25475 () | 32718..37988 | + | 5271 | WP_286347713.1 | Multifunctional conjugation protein TraI | Relaxase |
| QUE29_RS25480 () | 38008..38754 | + | 747 | WP_052921641.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| QUE29_RS25485 () | 38837..39205 | + | 369 | WP_000722532.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| QUE29_RS25490 () | 39241..39798 | + | 558 | WP_044863028.1 | fertility inhibition protein FinO | - |
| QUE29_RS25495 () | 39953..40156 | + | 204 | WP_001365608.1 | hypothetical protein | - |
| QUE29_RS25500 () | 40901..41362 | + | 462 | WP_000760086.1 | thermonuclease family protein | - |
| QUE29_RS25505 () | 41465..41848 | + | 384 | WP_047087080.1 | hypothetical protein | - |
| - () | 42023..42079 | - | 57 | NuclAT_1 | - | - |
| - () | 42023..42079 | - | 57 | NuclAT_1 | - | - |
| - () | 42023..42079 | - | 57 | NuclAT_1 | - | - |
| - () | 42023..42079 | - | 57 | NuclAT_1 | - | - |
| QUE29_RS25510 () | 42128..42277 | + | 150 | WP_001312851.1 | Hok/Gef family protein | - |
| QUE29_RS25515 () | 42561..42809 | + | 249 | WP_000083838.1 | replication regulatory protein RepA | - |
| QUE29_RS25520 () | 43056..43130 | + | 75 | WP_001365571.1 | RepA leader peptide Tap | - |
| QUE29_RS25525 () | 43123..43980 | + | 858 | WP_000131008.1 | incFII family plasmid replication initiator RepA | - |
| QUE29_RS25530 () | 44890..45027 | + | 138 | Protein_56 | XRE family transcriptional regulator | - |
| QUE29_RS25535 () | 45047..45310 | + | 264 | WP_001089474.1 | hypothetical protein | - |
| QUE29_RS25540 () | 45300..45599 | + | 300 | WP_000119542.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QUE29_RS25545 () | 45735..46187 | + | 453 | WP_000670963.1 | acyltransferase | - |
| QUE29_RS25550 () | 46590..46940 | - | 351 | WP_001365718.1 | plasmid partitioning/stability family protein | - |
| QUE29_RS25555 () | 46943..47905 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| QUE29_RS25560 () | 48038..48346 | + | 309 | WP_286347718.1 | hypothetical protein | - |
| QUE29_RS25565 () | 48441..49343 | + | 903 | WP_077879488.1 | DUF1281 domain-containing protein | - |
| QUE29_RS25570 () | 49340..49651 | + | 312 | WP_011666457.1 | hypothetical protein | - |
| QUE29_RS25575 () | 49727..50410 | + | 684 | WP_115765871.1 | DNA methylase | - |
| QUE29_RS25580 () | 50411..50632 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| QUE29_RS25585 () | 50562..51080 | + | 519 | WP_231229567.1 | DUF1380 family protein | - |
| QUE29_RS25590 () | 51124..51894 | + | 771 | WP_063502722.1 | hypothetical protein | - |
| QUE29_RS25595 () | 52309..52734 | + | 426 | WP_001198952.1 | antirestriction protein | - |
| QUE29_RS25600 () | 52781..53200 | + | 420 | WP_033551156.1 | DUF1380 family protein | - |
| QUE29_RS25605 () | 53200..53391 | + | 192 | WP_001027048.1 | hypothetical protein | - |
| QUE29_RS25610 () | 54424..54654 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| QUE29_RS25615 () | 54706..56067 | + | 1362 | WP_286347714.1 | DUF3560 domain-containing protein | - |
| QUE29_RS25620 () | 56114..56677 | + | 564 | WP_053001972.1 | class I SAM-dependent methyltransferase | - |
| QUE29_RS25625 () | 56829..57065 | + | 237 | WP_071594222.1 | hypothetical protein | - |
| QUE29_RS25630 () | 57538..58059 | + | 522 | WP_000290784.1 | single-stranded DNA-binding protein | - |
| QUE29_RS25635 () | 58117..58350 | + | 234 | WP_000005993.1 | DUF905 family protein | - |
| QUE29_RS25640 () | 58411..60369 | + | 1959 | WP_286347715.1 | ParB/RepB/Spo0J family partition protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|