NZ_AP0272571..173999

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 173999 bp
Accession: NZ_AP027257        Location: 1..173999         Organism: Escherichia coli strain JNE141411       Replicon: plasmid pJNE141411-1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QUD91_RS24850 (JNE141411_47220) 1321..10806 + 9486 WP_052904243.1 tRNA nuclease CdiA VF
QUD91_RS24855 (JNE141411_47230) 10793..11095 + 303 WP_001370014.1 hypothetical protein -
QUD91_RS24860 (JNE141411_47240) 11105..11287 + 183 WP_000205441.1 hypothetical protein -
QUD91_RS24865 (JNE141411_47250) 11661..12194 + 534 WP_224067688.1 hypothetical protein -
QUD91_RS24870 (JNE141411_47270) 12322..12684 + 363 WP_000812111.1 hypothetical protein -
QUD91_RS24875 (JNE141411_47280) 12665..13159 + 495 WP_001373089.1 DUF2569 domain-containing protein -
QUD91_RS24880 13245..13502 + 258 WP_001373122.1 hypothetical protein -
QUD91_RS24885 (JNE141411_47310) 14169..14405 + 237 WP_032257624.1 colicin V immunity protein -
QUD91_RS24890 14383..14460 + 78 Protein_9 colicin V -
QUD91_RS24895 14737..15734 - 998 Protein_10 IS110 family transposase IS4321R Transposase
QUD91_RS24900 (JNE141411_47350) 15931..16104 - 174 Protein_11 Tn3 family transposase ISPsy39 Transposase
QUD91_RS24905 (JNE141411_47370) 16360..17654 + 1295 Protein_12 VENN motif pre-toxin domain-containing protein -
QUD91_RS24910 (JNE141411_47380) 17654..17839 + 186 WP_071531845.1 CPCC family cysteine-rich protein -
QUD91_RS24915 (JNE141411_47390) 18144..18569 + 426 WP_000435654.1 IS66 family transposase IS682 Transposase
QUD91_RS24920 (JNE141411_47400) 18566..18914 + 349 Protein_15 IS66 family transposase IS682 Transposase
QUD91_RS24925 18945..19909 + 965 Protein_16 transposase -
QUD91_RS24930 (JNE141411_47440) 19963..21006 + 1044 WP_000912970.1 subtilase AB5 cytotoxin subunit A -
QUD91_RS24935 (JNE141411_47445) 21023..21448 + 426 WP_001373081.1 subtilase AB5 cytotoxin subunit B -
QUD91_RS24940 (JNE141411_47450) 21519..21728 + 210 Protein_19 hypothetical protein -
QUD91_RS24945 (JNE141411_47460) 21732..21920 - 189 Protein_20 IS66 family transposase IS682 Transposase
QUD91_RS24950 21997..22164 + 168 Protein_21 IS110 family transposase -
QUD91_RS24955 (JNE141411_47470) 22499..22921 + 423 WP_001212725.1 Exc2 family lipoprotein -
QUD91_RS24960 (JNE141411_47480) 23182..25269 - 2088 WP_001223214.1 bifunctional siderophore receptor/adhesin Iha -
QUD91_RS24965 25577..26668 - 1092 Protein_24 IS3 family transposase -
QUD91_RS24970 26877..27233 - 357 Protein_25 Adhesin YadA VF
QUD91_RS24975 27696..28703 - 1008 Protein_26 Adhesin YadA VF
QUD91_RS24980 28957..29046 + 90 Protein_27 transposase -
QUD91_RS24985 29113..30261 + 1149 Protein_28 IS3 family transposase -
QUD91_RS24990 (JNE141411_47560) 30319..30639 + 321 WP_001373084.1 hypothetical protein -
QUD91_RS24995 (JNE141411_47590) 31129..31806 - 678 WP_001158024.1 hypothetical protein -
QUD91_RS25000 (JNE141411_47600) 31965..32468 + 504 Protein_31 thermonuclease family protein -
QUD91_RS25005 (JNE141411_47610) 32848..36750 + 3903 WP_001034104.1 Serine protease EspP VF
QUD91_RS25010 36913..37074 - 162 WP_001365636.1 hypothetical protein -
QUD91_RS25015 (JNE141411_47620) 37256..37621 + 366 WP_000997727.1 hypothetical protein -
QUD91_RS25020 (JNE141411_47630) 37631..37822 + 192 WP_000264906.1 hypothetical protein -
QUD91_RS25025 (JNE141411_47640) 37850..38161 + 312 WP_000203483.1 hypothetical protein -
QUD91_RS25030 38325..38738 + 414 Protein_37 IS3 family transposase ISEcB1 Transposase
QUD91_RS25035 38809..39045 + 237 WP_001369996.1 hypothetical protein -
QUD91_RS25040 (JNE141411_47650) 39086..39784 - 699 WP_000431492.1 lactate utilization protein C -
QUD91_RS25045 (JNE141411_47660) 39789..41204 - 1416 WP_000054160.1 LutB/LldF family L-lactate oxidation iron-sulfur protein -
QUD91_RS25050 (JNE141411_47670) 41215..41934 - 720 WP_001102093.1 (Fe-S)-binding protein -
QUD91_RS25055 (JNE141411_47680) 41985..43541 - 1557 WP_000554411.1 L-lactate permease -
QUD91_RS25060 43906..44254 - 349 Protein_43 integrase core domain-containing protein -
QUD91_RS25065 44274..44903 - 630 Protein_44 transposase -
QUD91_RS25070 45008..46545 - 1538 Protein_45 IS3 family transposase -
QUD91_RS25075 (JNE141411_47740) 46632..47066 - 435 Protein_46 IS110 family transposase ISEc21 Transposase
QUD91_RS25080 47396..47943 - 548 Protein_47 transposase -
QUD91_RS25085 (JNE141411_47780) 48550..48834 + 285 WP_000439678.1 Major pilu subunit operon regulatory protein PapB VF
QUD91_RS25090 (JNE141411_47790) 49055..53350 + 4296 WP_024173665.1 Autotransporter adhesin SadA VF
QUD91_RS25095 (JNE141411_47800) 53375..54178 + 804 WP_000899428.1 Outer membrane protein A VF
QUD91_RS25100 54606..55121 + 516 WP_001365635.1 RTX-I toxin-activating lysine-acyltransferase ApxIC VF
QUD91_RS25105 (JNE141411_47830) 55123..58119 + 2997 WP_011310119.1 Hemolysin, chromosomal VF
QUD91_RS25110 (JNE141411_47840) 58169..60289 + 2121 WP_072094473.1 Alpha-hemolysin translocation ATP-binding protein HlyB VF
QUD91_RS25115 (JNE141411_47850) 60293..61732 + 1440 WP_001213534.1 Hemolysin secretion protein D, chromosomal VF
QUD91_RS25120 61799..61975 + 177 Protein_55 Transcriptional repressor MprA VF
QUD91_RS25125 62024..62347 + 324 WP_231367753.1 Transcriptional repressor MprA VF
QUD91_RS25130 62477..62725 + 249 WP_011310117.1 hypothetical protein -
QUD91_RS25135 62879..64105 + 1227 Protein_58 ISL3 family transposase -
QUD91_RS25140 64169..64882 + 714 Protein_59 tyrosine-type recombinase/integrase -
QUD91_RS25145 (JNE141411_47900) 65167..66144 - 978 WP_011310114.1 RepB family plasmid replication initiator protein -
QUD91_RS25150 66707..66924 + 218 Protein_61 hypothetical protein -
QUD91_RS25155 66928..67038 + 111 Protein_62 IS481 family transposase -
QUD91_RS25160 (JNE141411_47910) 67310..68041 + 732 WP_000850414.1 conjugal transfer complement resistance protein TraT -
QUD91_RS25165 (JNE141411_47920) 68101..68472 + 372 WP_001373114.1 colicin-like pore-forming protein -
QUD91_RS25170 (JNE141411_47950) 68955..69302 + 348 WP_000142427.1 DUF6404 family protein -
QUD91_RS25175 (JNE141411_47960) 69320..69910 - 591 WP_033802802.1 hypothetical protein -
QUD91_RS25180 (JNE141411_47970) 69907..70167 - 261 WP_000343100.1 hypothetical protein -
QUD91_RS25185 (JNE141411_47990) 70763..70981 + 219 WP_000813639.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
QUD91_RS25190 (JNE141411_48000) 70983..71288 + 306 WP_001159871.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
QUD91_RS25195 (JNE141411_48010) 71289..72095 + 807 WP_000016966.1 site-specific integrase -
QUD91_RS25200 (JNE141411_48020) 72275..72919 + 645 WP_001144036.1 ParA family protein -
QUD91_RS25205 (JNE141411_48030) 73006..73314 + 309 WP_000030199.1 hypothetical protein -
QUD91_RS25210 (JNE141411_48040) 73729..74709 + 981 WP_000688510.1 plasmid segregation protein ParM -
QUD91_RS25215 (JNE141411_48050) 74702..75118 + 417 WP_286335645.1 plasmid partitioning/stability family protein -
QUD91_RS25220 (JNE141411_48060) 75120..75293 - 174 Protein_75 DUF4113 domain-containing protein -
QUD91_RS25225 (JNE141411_48070) 75323..76915 - 1593 WP_000080210.1 IS66 family transposase ISEc47 Transposase
QUD91_RS25230 (JNE141411_48080) 76946..77296 - 351 WP_000950104.1 IS66 family transposase IS682 Transposase
QUD91_RS25235 (JNE141411_48090) 77248..77712 - 465 WP_001373091.1 IS66 family transposase ISEc23 Transposase
QUD91_RS25240 (JNE141411_48100) 78217..79008 - 792 WP_000977390.1 DUF4198 domain-containing protein -
QUD91_RS25245 (JNE141411_48110) 79027..81000 - 1974 WP_024199761.1 Hemin receptor VF
QUD91_RS25250 (JNE141411_48130) 81497..81706 + 210 Protein_81 IS21 family transposase IS21 Transposase
QUD91_RS25255 (JNE141411_48140) 81702..82394 + 693 Protein_82 protein YagA -
QUD91_RS25260 (JNE141411_48150) 82673..84553 + 1881 WP_001283354.1 colicin Ia central receptor-binding domain-containing protein -
QUD91_RS25265 (JNE141411_48160) 84571..84918 - 348 WP_000762580.1 colicin E1 family microcin immunity protein -
QUD91_RS25270 (JNE141411_48170) 85037..85384 + 348 WP_000142449.1 DUF6404 family protein -
QUD91_RS25275 (JNE141411_48180) 85404..85994 - 591 WP_286335646.1 hypothetical protein -
QUD91_RS25280 85994..86245 - 252 WP_031322317.1 hypothetical protein -
QUD91_RS25285 (JNE141411_48190) 86634..86936 - 303 WP_001245884.1 hypothetical protein -
QUD91_RS25290 (JNE141411_48200) 86933..87559 - 627 WP_000587689.1 ParA family plasmid-partitioning AAA ATPase -
QUD91_RS25295 (JNE141411_48220) 87763..89033 - 1271 Protein_90 translesion error-prone DNA polymerase V subunit UmuC -
QUD91_RS25300 89033..89469 - 437 Protein_91 translesion error-prone DNA polymerase V autoproteolytic subunit -
QUD91_RS25305 (JNE141411_48250) 89466..89714 - 249 WP_000618108.1 DinI-like family protein -
QUD91_RS25310 (JNE141411_48260) 90133..91035 + 903 WP_286335647.1 DUF1281 domain-containing protein -
QUD91_RS25315 91039..91344 + 306 WP_032236829.1 hypothetical protein -
QUD91_RS25320 (JNE141411_48270) 91421..92104 + 684 WP_000086114.1 DNA methylase -
QUD91_RS25325 (JNE141411_48280) 92105..92326 + 222 WP_001104873.1 hypothetical protein -
QUD91_RS25330 (JNE141411_48290) 92256..92774 + 519 WP_224065154.1 DUF1380 family protein -
QUD91_RS25335 (JNE141411_48300) 92819..93589 + 771 WP_001006218.1 hypothetical protein -
QUD91_RS25340 (JNE141411_48320) 94003..94428 + 426 WP_001198919.1 antirestriction protein -
QUD91_RS25345 (JNE141411_48330) 94475..94894 + 420 WP_000271737.1 DUF1380 family protein -
QUD91_RS25350 (JNE141411_48340) 94894..95085 + 192 WP_001027507.1 hypothetical protein -
QUD91_RS25355 95048..95401 + 354 WP_001367791.1 hypothetical protein -
QUD91_RS25360 (JNE141411_48360) 95838..96371 + 534 WP_001276132.1 single-stranded DNA-binding protein -
QUD91_RS25365 (JNE141411_48370) 96429..96662 + 234 WP_000006027.1 DUF905 domain-containing protein -
QUD91_RS25370 96722..98490 + 1769 Protein_105 ParB/RepB/Spo0J family partition protein -
QUD91_RS25375 (JNE141411_48400) 98545..98979 + 435 WP_000845900.1 conjugation system SOS inhibitor PsiB -
QUD91_RS25380 (JNE141411_48410) 98976..99695 + 720 WP_001276258.1 plasmid SOS inhibition protein A -
QUD91_RS25385 (JNE141411_48420) 99692..100288 + 597 WP_000978008.1 hypothetical protein -
QUD91_RS25390 (JNE141411_48440) 100753..101253 + 501 WP_000117616.1 antirestriction protein ArdA -
QUD91_RS25395 (JNE141411_48450) 101985..102419 + 435 WP_000218847.1 hypothetical protein -
QUD91_RS25400 (JNE141411_48460) 102512..102778 + 267 WP_001247860.1 hypothetical protein -
QUD91_RS25405 (JNE141411_48470) 102843..103769 + 927 WP_000038346.1 Recombination-promoting nuclease RpnA VF
QUD91_RS25410 (JNE141411_48480) 103769..104002 + 234 WP_001370006.1 hypothetical protein -
QUD91_RS25415 (JNE141411_48490) 104033..104284 - 252 WP_000148286.1 helix-turn-helix transcriptional regulator -
QUD91_RS25420 (JNE141411_48500) 104864..105712 + 849 WP_001077037.1 DUF4942 domain-containing protein -
QUD91_RS25425 (JNE141411_48510) 105797..106132 - 336 WP_000157095.1 molybdopterin-guanine dinucleotide biosynthesis protein MobC -
QUD91_RS25430 (JNE141411_48520) 106365..106697 + 333 WP_001291058.1 plasmid mobilization protein MobA -
QUD91_RS25435 (JNE141411_48530) 106709..109420 + 2712 WP_000991388.1 Protein TraI Relaxase
QUD91_RS25440 (JNE141411_48540) 109488..109919 + 432 WP_001335086.1 cell envelope integrity TolA C-terminal domain-containing protein -
QUD91_RS25445 (JNE141411_48550) 110017..110319 - 303 WP_000334995.1 hypothetical protein -
QUD91_RS25450 (JNE141411_48560) 110445..112748 - 2304 WP_000077655.1 F-type conjugative transfer protein TrbC -
QUD91_RS25455 (JNE141411_48570) 112729..113847 - 1119 WP_000155603.1 DsbC family protein -
QUD91_RS25460 (JNE141411_48580) 113844..115124 - 1281 WP_000121922.1 IncI1-type conjugal transfer protein TrbA -
QUD91_RS25465 115633..115728 + 96 WP_000609151.1 DinQ-like type I toxin DqlB -
QUD91_RS25470 (JNE141411_48590) 115871..116182 - 312 WP_000203481.1 hypothetical protein -
QUD91_RS25475 (JNE141411_48600) 116210..116401 - 192 WP_000264906.1 hypothetical protein -
QUD91_RS25480 (JNE141411_48610) 116411..116776 - 366 WP_000997722.1 hypothetical protein -
QUD91_RS25485 (JNE141411_48620) 117283..121362 - 4080 WP_106879217.1 Serine protease SepA autotransporter VF
QUD91_RS25490 (JNE141411_48630) 121809..122222 - 414 WP_000598952.1 thermonuclease family protein -
QUD91_RS25495 (JNE141411_48640) 122381..123004 + 624 WP_001158022.1 hypothetical protein -
QUD91_RS25500 123092..123547 + 456 WP_001205142.1 DUF2569 family protein -
QUD91_RS25505 (JNE141411_48650) 123748..125283 + 1536 WP_001373098.1 phosphoethanolamine transferase -
QUD91_RS25510 (JNE141411_48660) 125376..125618 - 243 WP_001398505.1 hypothetical protein -
QUD91_RS25515 (JNE141411_48670) 125952..126104 + 153 WP_001367784.1 Hok/Gef family protein -
QUD91_RS25520 (JNE141411_48680) 126242..127828 - 1587 WP_000004559.1 sigma factor-like helix-turn-helix DNA-binding protein -
QUD91_RS25525 128102..128752 - 651 WP_001098359.1 plasmid IncI1-type surface exclusion protein ExcA -
QUD91_RS25530 (JNE141411_48700) 128823..130988 - 2166 WP_000691798.1 DotA/TraY family protein -
QUD91_RS25535 (JNE141411_48710) 131061..131630 - 570 WP_001204060.1 conjugal transfer protein TraX -
QUD91_RS25540 (JNE141411_48720) 131627..132832 - 1206 WP_001189539.1 conjugal transfer protein TraW -
QUD91_RS25545 (JNE141411_48730) 132793..133410 - 618 WP_000286860.1 hypothetical protein -
QUD91_RS25550 (JNE141411_48740) 133410..136454 - 3045 WP_001024763.1 hypothetical protein -
QUD91_RS25555 136630..137013 - 384 WP_001373118.1 hypothetical protein -
QUD91_RS25560 (JNE141411_48750) 137010..137369 - 360 WP_000380400.1 hypothetical protein -
QUD91_RS25565 (JNE141411_48760) 137424..138242 - 819 WP_072095383.1 conjugal transfer protein TraT -
QUD91_RS25570 (JNE141411_48770) 138157..138408 - 252 WP_001277575.1 hypothetical protein -
QUD91_RS25575 (JNE141411_48780) 138465..138863 - 399 WP_000086066.1 hypothetical protein -
QUD91_RS25580 (JNE141411_48790) 138910..139440 - 531 WP_000987022.1 conjugal transfer protein TraQ -
QUD91_RS25585 139437..140150 - 714 WP_000787009.1 conjugal transfer protein TraP -
QUD91_RS25590 (JNE141411_48820) 140147..141478 - 1332 WP_001272011.1 conjugal transfer protein TraO -
QUD91_RS25595 (JNE141411_48830) 141482..142456 - 975 WP_001165562.1 hypothetical protein VF
QUD91_RS25600 (JNE141411_48850) 142467..143162 - 696 WP_001287263.1 DotI/IcmL family type IV secretion protein -
QUD91_RS25605 (JNE141411_48860) 143174..143524 - 351 WP_001056369.1 hypothetical protein -
QUD91_RS25610 (JNE141411_48870) 143541..147563 - 4023 WP_000842441.1 DUF5710 domain-containing protein -
QUD91_RS25615 (JNE141411_48880) 147627..147917 - 291 WP_000817799.1 hypothetical protein -
QUD91_RS25620 (JNE141411_48890) 147914..149062 - 1149 WP_000625245.1 putative protein YggR VF
QUD91_RS25625 (JNE141411_48900) 149046..149882 - 837 WP_000848138.1 hypothetical protein VF
QUD91_RS25630 (JNE141411_48910) 149879..150331 - 453 WP_001081200.1 DotD/TraH family lipoprotein -
QUD91_RS25635 (JNE141411_48930) 150690..151892 - 1203 WP_000980152.1 conjugal transfer protein TraF -
QUD91_RS25640 (JNE141411_48940) 151982..152803 - 822 WP_000804094.1 hypothetical protein -
QUD91_RS25645 (JNE141411_48950) 153063..153383 + 321 WP_000695053.1 hypothetical protein -
QUD91_RS25650 (JNE141411_48960) 153475..153765 - 291 WP_000681897.1 hypothetical protein -
QUD91_RS25655 153807..153965 - 159 Protein_162 integrase -
QUD91_RS25660 (JNE141411_48980) 154223..155587 - 1365 WP_001168070.1 hypothetical protein VF
QUD91_RS25665 (JNE141411_48990) 155592..156227 - 636 WP_000478595.1 prepilin peptidase -
QUD91_RS25670 (JNE141411_49000) 156246..156719 - 474 WP_000870986.1 hypothetical protein VF
QUD91_RS25675 (JNE141411_49010) 156773..157309 - 537 WP_001011156.1 type 4 pilus major pilin -
QUD91_RS25680 (JNE141411_49020) 157383..158483 - 1101 WP_000670140.1 Toxin coregulated pilus biosynthesis protein E VF
QUD91_RS25685 (JNE141411_49030) 158485..159993 - 1509 WP_000886636.1 Toxin coregulated pilus biosynthesis protein T VF
QUD91_RS25690 (JNE141411_49040) 160078..160530 - 453 WP_001112923.1 type IV pilus biogenesis protein PilP -
QUD91_RS25695 (JNE141411_49050) 160520..161815 - 1296 WP_000129890.1 type 4b pilus protein PilO2 -
QUD91_RS25700 (JNE141411_49060) 161836..163455 - 1620 WP_001034995.1 Outer membrane lipoprotein BfpB VF
QUD91_RS25705 (JNE141411_49070) 163486..163923 - 438 WP_000539684.1 type IV pilus biogenesis protein PilM -
QUD91_RS25710 163928..164998 - 1071 WP_001170190.1 hypothetical protein VF
QUD91_RS25715 165155..165457 - 303 Protein_174 hypothetical protein -
QUD91_RS25720 (JNE141411_49100) 165607..165849 - 243 WP_077888482.1 PilI type IV pilus biogenesis protein -
QUD91_RS25725 (JNE141411_49110) 165930..167624 - 1695 WP_000482662.1 flotillin family protein -
QUD91_RS25730 (JNE141411_49120) 167651..168271 - 621 WP_000176499.1 DUF1449 family protein -
QUD91_RS25735 (JNE141411_49130) 168538..169203 - 666 WP_000154144.1 hypothetical protein -
QUD91_RS25740 169344..169985 - 642 WP_000335846.1 transcription termination/antitermination NusG family protein -
QUD91_RS25745 (JNE141411_49160) 170687..171718 + 1032 WP_000907876.1 plasmid replication initiator RepA -
QUD91_RS25750 (JNE141411_49170) 172687..172926 + 240 WP_000859017.1 winged helix-turn-helix transcriptional regulator -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance