MGE detailed information
MGE type: Conjugative plasmid MGE length: 160552 bp
Accession: NZ_AP027255 Location: 1..160552 Organism: Escherichia coli strain JNE120442 Replicon: plasmid pJNE120442-1
Accession: NZ_AP027255 Location: 1..160552 Organism: Escherichia coli strain JNE120442 Replicon: plasmid pJNE120442-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE31_RS24580 (JNE120442_46830) | 1..1032 | + | 1032 | WP_106912572.1 | plasmid replication initiator RepA | - |
| QUE31_RS24585 | 1729..1989 | + | 261 | WP_072094435.1 | hypothetical protein | - |
| QUE31_RS24590 (JNE120442_46840) | 2002..2241 | + | 240 | WP_000859017.1 | winged helix-turn-helix transcriptional regulator | - |
| QUE31_RS24595 (JNE120442_46850) | 2856..4622 | + | 1767 | WP_135253101.1 | Hemolysin transporter protein ShlB | VF |
| QUE31_RS24600 (JNE120442_46860) | 4635..14075 | + | 9441 | WP_250217796.1 | tRNA nuclease CdiA | VF |
| QUE31_RS24605 (JNE120442_46870) | 14068..14328 | + | 261 | WP_000038919.1 | hypothetical protein | - |
| QUE31_RS24610 | 14757..15751 | - | 995 | Protein_6 | IS110 family transposase IS4321 | Transposase |
| QUE31_RS24615 (JNE120442_46900) | 15948..16121 | - | 174 | Protein_7 | Tn3 family transposase ISPsy39 | Transposase |
| QUE31_RS24620 (JNE120442_46910) | 16452..17675 | + | 1224 | Protein_8 | VENN motif pre-toxin domain-containing protein | - |
| QUE31_RS24625 (JNE120442_46920) | 17675..17860 | + | 186 | WP_071531845.1 | CPCC family cysteine-rich protein | - |
| QUE31_RS24630 (JNE120442_46930) | 18165..18590 | + | 426 | WP_000435654.1 | IS66 family transposase IS682 | Transposase |
| QUE31_RS24635 (JNE120442_46940) | 18587..18935 | + | 349 | Protein_11 | IS66 family transposase IS682 | Transposase |
| QUE31_RS24640 | 18966..19930 | + | 965 | Protein_12 | transposase | - |
| QUE31_RS24645 (JNE120442_46980) | 19984..21027 | + | 1044 | WP_000912970.1 | subtilase AB5 cytotoxin subunit A | - |
| QUE31_RS24650 (JNE120442_46985) | 21044..21469 | + | 426 | WP_135253106.1 | subtilase AB5 cytotoxin subunit B | - |
| QUE31_RS24655 (JNE120442_46990) | 21540..21749 | + | 210 | Protein_15 | hypothetical protein | - |
| QUE31_RS24660 (JNE120442_47000) | 21753..21941 | - | 189 | Protein_16 | IS66 family transposase IS682 | Transposase |
| QUE31_RS24665 | 22018..22185 | + | 168 | Protein_17 | IS110 family transposase | - |
| QUE31_RS24670 (JNE120442_47010) | 22520..22942 | + | 423 | WP_001212725.1 | Exc2 family lipoprotein | - |
| QUE31_RS24675 (JNE120442_47020) | 23203..25290 | - | 2088 | WP_001223214.1 | bifunctional siderophore receptor/adhesin Iha | - |
| QUE31_RS24680 (JNE120442_47030) | 25598..26661 | - | 1064 | Protein_20 | IS3 family transposase ISEc17 | Transposase |
| QUE31_RS24685 (JNE120442_47060) | 26912..28294 | - | 1383 | WP_064506697.1 | Adhesin YadA | VF |
| QUE31_RS24690 | 28548..28637 | + | 90 | Protein_22 | transposase | - |
| QUE31_RS24695 (JNE120442_47080) | 28704..29866 | + | 1163 | WP_286356138.1 | IS3 family transposase ISEc17 | Transposase |
| QUE31_RS24700 (JNE120442_47090) | 30048..30239 | + | 192 | WP_250204767.1 | hypothetical protein | - |
| QUE31_RS24705 (JNE120442_47120) | 30729..31406 | - | 678 | WP_286356139.1 | DNA-binding protein | - |
| QUE31_RS24710 (JNE120442_47130) | 31565..32068 | + | 504 | Protein_26 | thermonuclease family protein | - |
| QUE31_RS24715 (JNE120442_47140) | 32448..36350 | + | 3903 | WP_047091594.1 | Serine protease EspP | VF |
| QUE31_RS24720 (JNE120442_47150) | 36513..36722 | - | 210 | WP_231360110.1 | hypothetical protein | - |
| QUE31_RS24725 (JNE120442_47160) | 36856..37218 | + | 363 | WP_106889584.1 | hypothetical protein | - |
| QUE31_RS24730 (JNE120442_47170) | 37231..37422 | + | 192 | WP_000264906.1 | hypothetical protein | - |
| QUE31_RS24735 (JNE120442_47180) | 37450..37761 | + | 312 | WP_000203479.1 | hypothetical protein | - |
| QUE31_RS24740 | 37925..38161 | + | 237 | Protein_32 | DDE-type integrase/transposase/recombinase | - |
| QUE31_RS24745 (JNE120442_47190) | 38254..38673 | + | 420 | WP_000422695.1 | IS66 family transposase ISEc23 | Transposase |
| QUE31_RS24750 (JNE120442_47200) | 38670..39020 | + | 351 | WP_000624677.1 | IS66 family transposase IS682 | Transposase |
| QUE31_RS24755 (JNE120442_47210) | 39051..40643 | + | 1593 | WP_040118371.1 | IS66 family transposase ISEc47 | Transposase |
| QUE31_RS24760 | 40696..40851 | + | 156 | Protein_36 | IS3 family transposase | - |
| QUE31_RS24765 (JNE120442_47220) | 41198..41896 | - | 699 | WP_135253124.1 | lactate utilization protein C | - |
| QUE31_RS24770 (JNE120442_47230) | 41901..43316 | - | 1416 | WP_000054160.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| QUE31_RS24775 (JNE120442_47240) | 43327..44046 | - | 720 | WP_135253123.1 | (Fe-S)-binding protein | - |
| QUE31_RS24780 (JNE120442_47250) | 44097..45653 | - | 1557 | WP_040118375.1 | L-lactate permease | - |
| QUE31_RS24785 | 46849..47031 | + | 183 | WP_231364794.1 | Major pilu subunit operon regulatory protein PapB | VF |
| QUE31_RS24790 (JNE120442_47270) | 47048..51376 | + | 4329 | WP_135253121.1 | Autotransporter adhesin SadA | VF |
| QUE31_RS24795 (JNE120442_47280) | 51401..52204 | + | 804 | WP_000899428.1 | Outer membrane protein A | VF |
| QUE31_RS24800 | 52632..53147 | + | 516 | WP_001365635.1 | RTX-I toxin-activating lysine-acyltransferase ApxIC | VF |
| QUE31_RS24805 (JNE120442_47310) | 53149..56145 | + | 2997 | WP_047082204.1 | Hemolysin, chromosomal | VF |
| QUE31_RS24810 (JNE120442_47320) | 56195..58315 | + | 2121 | WP_072094473.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| QUE31_RS24815 (JNE120442_47330) | 58319..59758 | + | 1440 | WP_135253120.1 | Hemolysin secretion protein D, chromosomal | VF |
| QUE31_RS24820 | 59825..60001 | + | 177 | Protein_48 | Transcriptional repressor MprA | VF |
| QUE31_RS24825 | 60050..60373 | + | 324 | WP_231374175.1 | Transcriptional repressor MprA | VF |
| QUE31_RS24830 | 60561..61789 | + | 1229 | WP_102384962.1 | IS3 family transposase IS2 | Transposase |
| QUE31_RS24835 | 61839..62062 | + | 224 | Protein_51 | serine/threonine protein kinase | - |
| QUE31_RS24840 | 62219..62501 | + | 283 | Protein_52 | ISL3 family transposase ISEc53 | Transposase |
| QUE31_RS24845 (JNE120442_47380) | 62740..63717 | - | 978 | WP_001369978.1 | RepB family plasmid replication initiator protein | - |
| QUE31_RS24850 | 64459..64611 | + | 153 | Protein_54 | IS481 family transposase | - |
| QUE31_RS24855 (JNE120442_47390) | 64888..65619 | + | 732 | WP_000850413.1 | conjugal transfer complement resistance protein TraT | - |
| QUE31_RS24860 (JNE120442_47400) | 65735..66049 | + | 315 | Protein_56 | colicin-like pore-forming protein | - |
| QUE31_RS24865 (JNE120442_47410) | 66056..66391 | - | 336 | WP_021292998.1 | colicin E1 family microcin immunity protein | - |
| QUE31_RS24870 | 66520..66867 | + | 348 | WP_033817147.1 | DUF6404 family protein | - |
| QUE31_RS24875 (JNE120442_47430) | 66885..67475 | - | 591 | WP_021293255.1 | hypothetical protein | - |
| QUE31_RS24880 (JNE120442_47440) | 67472..67732 | - | 261 | WP_000343102.1 | hypothetical protein | - |
| QUE31_RS24885 (JNE120442_47450) | 68328..68546 | + | 219 | WP_038355956.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QUE31_RS24890 (JNE120442_47460) | 68548..68853 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QUE31_RS24895 (JNE120442_47470) | 68854..69660 | + | 807 | WP_040116953.1 | site-specific integrase | - |
| QUE31_RS24900 (JNE120442_47480) | 69840..70484 | + | 645 | WP_001144036.1 | ParA family protein | - |
| QUE31_RS24905 (JNE120442_47490) | 70571..70879 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| QUE31_RS24910 (JNE120442_47500) | 71293..72273 | + | 981 | WP_106912565.1 | plasmid segregation protein ParM | - |
| QUE31_RS24915 (JNE120442_47510) | 72266..72682 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| QUE31_RS24920 (JNE120442_47530) | 72684..73957 | - | 1274 | Protein_68 | translesion error-prone DNA polymerase V subunit UmuC | - |
| QUE31_RS24925 (JNE120442_47540) | 73957..74394 | - | 438 | WP_106912564.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QUE31_RS24930 (JNE120442_47550) | 74391..74639 | - | 249 | WP_000618108.1 | DinI-like family protein | - |
| QUE31_RS24935 (JNE120442_47560) | 75659..77383 | + | 1725 | Protein_71 | group II intron reverse transcriptase/maturase | - |
| QUE31_RS24940 (JNE120442_47570) | 77460..78362 | + | 903 | WP_135253116.1 | DUF1281 domain-containing protein | - |
| QUE31_RS24945 | 78359..78670 | + | 312 | WP_012680995.1 | hypothetical protein | - |
| QUE31_RS24950 (JNE120442_47580) | 78747..79430 | + | 684 | WP_000086152.1 | DNA methylase | - |
| QUE31_RS24955 (JNE120442_47590) | 79431..79652 | + | 222 | WP_001104898.1 | hypothetical protein | - |
| QUE31_RS24960 (JNE120442_47600) | 79633..80100 | + | 468 | WP_249519000.1 | DUF1380 family protein | - |
| QUE31_RS24965 | 80145..80878 | + | 734 | Protein_77 | hypothetical protein | - |
| QUE31_RS24970 (JNE120442_47640) | 81290..81715 | + | 426 | WP_001198915.1 | antirestriction protein | - |
| QUE31_RS24975 (JNE120442_47650) | 81762..82181 | + | 420 | WP_000271736.1 | DUF1380 family protein | - |
| QUE31_RS24980 (JNE120442_47660) | 82181..82372 | + | 192 | WP_001027048.1 | hypothetical protein | - |
| QUE31_RS24985 (JNE120442_47680) | 83125..83658 | + | 534 | WP_137459752.1 | single-stranded DNA-binding protein | - |
| QUE31_RS24990 (JNE120442_47690) | 83716..83949 | + | 234 | WP_000006027.1 | DUF905 domain-containing protein | - |
| QUE31_RS24995 (JNE120442_47700) | 84009..85967 | + | 1959 | WP_137459751.1 | ParB/RepB/Spo0J family partition protein | - |
| QUE31_RS25000 (JNE120442_47710) | 86022..86456 | + | 435 | WP_000845900.1 | conjugation system SOS inhibitor PsiB | - |
| QUE31_RS25005 (JNE120442_47720) | 86453..87172 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| QUE31_RS25010 (JNE120442_47730) | 87169..87765 | + | 597 | WP_000978007.1 | hypothetical protein | - |
| QUE31_RS25015 (JNE120442_47750) | 88230..88730 | + | 501 | Protein_87 | antirestriction protein ArdA | - |
| QUE31_RS25020 (JNE120442_47760) | 89461..89895 | + | 435 | WP_000218857.1 | hypothetical protein | - |
| QUE31_RS25025 (JNE120442_47770) | 89988..90254 | + | 267 | WP_021580018.1 | hypothetical protein | - |
| QUE31_RS25030 (JNE120442_47780) | 90431..90820 | + | 390 | WP_001317525.1 | hypothetical protein | - |
| QUE31_RS25035 (JNE120442_47790) | 90817..91755 | + | 939 | WP_062859194.1 | Recombination-promoting nuclease RpnA | VF |
| QUE31_RS25040 (JNE120442_47800) | 91755..92000 | + | 246 | WP_135253112.1 | hypothetical protein | - |
| QUE31_RS25045 (JNE120442_47810) | 92031..92282 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| QUE31_RS25050 (JNE120442_47820) | 92864..93712 | + | 849 | WP_135253111.1 | DUF4942 domain-containing protein | - |
| QUE31_RS25055 (JNE120442_47830) | 93797..94132 | - | 336 | WP_000157096.1 | hypothetical protein | - |
| QUE31_RS25060 (JNE120442_47840) | 94364..94696 | + | 333 | WP_001291058.1 | plasmid mobilization protein MobA | - |
| QUE31_RS25065 (JNE120442_47850) | 94708..97419 | + | 2712 | WP_135253110.1 | Protein TraI | Relaxase |
| QUE31_RS25070 (JNE120442_47860) | 97487..97918 | + | 432 | WP_073614123.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| QUE31_RS25075 (JNE120442_47870) | 98016..98165 | - | 150 | WP_024199253.1 | hypothetical protein | - |
| QUE31_RS25080 (JNE120442_47890) | 98725..101028 | - | 2304 | WP_286356135.1 | F-type conjugative transfer protein TrbC | - |
| QUE31_RS25085 (JNE120442_47900) | 101009..102127 | - | 1119 | WP_194881870.1 | thioredoxin fold domain-containing protein | - |
| QUE31_RS25090 (JNE120442_47910) | 102124..103395 | - | 1272 | WP_040116984.1 | IncI1-type conjugal transfer protein TrbA | - |
| QUE31_RS25095 | 103940..104035 | + | 96 | WP_000609151.1 | DinQ-like type I toxin DqlB | - |
| QUE31_RS25100 (JNE120442_47920) | 104181..104492 | - | 312 | WP_032275058.1 | hypothetical protein | - |
| QUE31_RS25105 (JNE120442_47930) | 104523..104714 | - | 192 | WP_032275057.1 | hypothetical protein | - |
| QUE31_RS25110 (JNE120442_47940) | 104724..105089 | - | 366 | WP_011310096.1 | hypothetical protein | - |
| QUE31_RS25115 | 105223..105348 | + | 126 | WP_264118052.1 | hypothetical protein | - |
| QUE31_RS25120 (JNE120442_47950) | 105596..109675 | - | 4080 | WP_137465898.1 | Serine protease SepA autotransporter | VF |
| QUE31_RS25125 (JNE120442_47960) | 110040..110543 | - | 504 | Protein_109 | thermonuclease family protein | - |
| QUE31_RS25130 (JNE120442_47970) | 110702..111325 | + | 624 | WP_001158019.1 | hypothetical protein | - |
| QUE31_RS25135 | 111413..111868 | + | 456 | WP_135253090.1 | DUF2569 family protein | - |
| QUE31_RS25140 (JNE120442_47980) | 112068..113603 | + | 1536 | WP_170980332.1 | phosphoethanolamine transferase | - |
| QUE31_RS25145 (JNE120442_47990) | 113696..113938 | - | 243 | WP_001317518.1 | hypothetical protein | - |
| QUE31_RS25150 (JNE120442_48000) | 114271..114423 | + | 153 | WP_001367784.1 | Hok/Gef family protein | - |
| QUE31_RS25155 | 114737..115387 | - | 651 | WP_033810773.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QUE31_RS25160 (JNE120442_48020) | 115458..117623 | - | 2166 | WP_029365204.1 | DotA/TraY family protein | - |
| QUE31_RS25165 (JNE120442_48030) | 117696..118265 | - | 570 | WP_021580035.1 | conjugal transfer protein TraX | - |
| QUE31_RS25170 (JNE120442_48040) | 118262..119467 | - | 1206 | WP_077166897.1 | conjugal transfer protein TraW | - |
| QUE31_RS25175 (JNE120442_48050) | 119425..120045 | - | 621 | WP_000286858.1 | hypothetical protein | - |
| QUE31_RS25180 (JNE120442_48060) | 120045..123089 | - | 3045 | WP_286356136.1 | ATP-binding protein | - |
| QUE31_RS25185 | 123265..123648 | - | 384 | WP_011310086.1 | hypothetical protein | - |
| QUE31_RS25190 (JNE120442_48070) | 123645..124004 | - | 360 | WP_000380400.1 | hypothetical protein | - |
| QUE31_RS25195 (JNE120442_48080) | 124059..124877 | - | 819 | WP_072159753.1 | conjugal transfer protein TraT | - |
| QUE31_RS25200 (JNE120442_48090) | 124792..125043 | - | 252 | WP_001277575.1 | hypothetical protein | - |
| QUE31_RS25205 (JNE120442_48100) | 125100..125498 | - | 399 | WP_000086068.1 | hypothetical protein | - |
| QUE31_RS25210 (JNE120442_48110) | 125547..126077 | - | 531 | WP_000987018.1 | conjugal transfer protein TraQ | - |
| QUE31_RS25215 | 126074..126787 | - | 714 | WP_137459733.1 | conjugal transfer protein TraP | - |
| QUE31_RS25220 (JNE120442_48140) | 126784..128116 | - | 1333 | Protein_128 | conjugal transfer protein TraO | - |
| QUE31_RS25225 (JNE120442_48150) | 128120..129094 | - | 975 | WP_135253093.1 | hypothetical protein | VF |
| QUE31_RS25230 (JNE120442_48160) | 129105..129800 | - | 696 | WP_001597013.1 | DotI/IcmL family type IV secretion protein | - |
| QUE31_RS25235 (JNE120442_48170) | 129812..130162 | - | 351 | WP_135253094.1 | conjugal transfer protein | - |
| QUE31_RS25240 (JNE120442_48180) | 130179..134195 | - | 4017 | WP_137459732.1 | DUF5710 domain-containing protein | - |
| QUE31_RS25245 (JNE120442_48190) | 134259..134549 | - | 291 | WP_021526897.1 | hypothetical protein | - |
| QUE31_RS25250 (JNE120442_48200) | 134546..135694 | - | 1149 | WP_000625249.1 | putative protein YggR | VF |
| QUE31_RS25255 (JNE120442_48210) | 135678..136514 | - | 837 | WP_000848138.1 | hypothetical protein | VF |
| QUE31_RS25260 (JNE120442_48220) | 136511..136963 | - | 453 | WP_001081199.1 | DotD/TraH family lipoprotein | - |
| QUE31_RS25265 (JNE120442_48230) | 137012..137182 | - | 171 | WP_000482367.1 | hypothetical protein | - |
| QUE31_RS25270 (JNE120442_48240) | 137322..138524 | - | 1203 | WP_000980149.1 | conjugal transfer protein TraF | - |
| QUE31_RS25275 (JNE120442_48250) | 138614..139435 | - | 822 | WP_021531786.1 | hypothetical protein | - |
| QUE31_RS25280 (JNE120442_48260) | 139695..140015 | + | 321 | WP_000695052.1 | hypothetical protein | - |
| QUE31_RS25285 (JNE120442_48270) | 140107..140397 | - | 291 | WP_000681898.1 | hypothetical protein | - |
| QUE31_RS25290 | 140439..140597 | - | 159 | Protein_142 | integrase | - |
| QUE31_RS25295 (JNE120442_48290) | 140855..142219 | - | 1365 | WP_021531785.1 | hypothetical protein | VF |
| QUE31_RS25300 (JNE120442_48300) | 142224..142859 | - | 636 | WP_021580044.1 | prepilin peptidase | - |
| QUE31_RS25305 (JNE120442_48310) | 142878..143351 | - | 474 | WP_286356137.1 | hypothetical protein | VF |
| QUE31_RS25310 (JNE120442_48320) | 143405..143941 | - | 537 | WP_001011156.1 | type 4 pilus major pilin | - |
| QUE31_RS25315 (JNE120442_48330) | 144015..145115 | - | 1101 | WP_000670136.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| QUE31_RS25320 (JNE120442_48340) | 145117..146625 | - | 1509 | WP_000886638.1 | Type II secretion system protein E | VF |
| QUE31_RS25325 (JNE120442_48350) | 146710..147162 | - | 453 | WP_135253096.1 | type IV pilus biogenesis protein PilP | - |
| QUE31_RS25330 (JNE120442_48360) | 147152..148447 | - | 1296 | WP_000129888.1 | type 4b pilus protein PilO2 | - |
| QUE31_RS25335 (JNE120442_48370) | 148468..150087 | - | 1620 | WP_001034998.1 | Outer membrane lipoprotein BfpB | VF |
| QUE31_RS25340 (JNE120442_48380) | 150118..150555 | - | 438 | WP_000539684.1 | type IV pilus biogenesis protein PilM | - |
| QUE31_RS25345 | 150560..151630 | - | 1071 | WP_135253097.1 | hypothetical protein | VF |
| QUE31_RS25350 (JNE120442_48410) | 151787..152122 | - | 336 | WP_024174020.1 | hypothetical protein | - |
| QUE31_RS25355 (JNE120442_48420) | 152238..152480 | - | 243 | WP_001271734.1 | PilI type IV pilus biogenesis protein | - |
| QUE31_RS25360 (JNE120442_48430) | 152561..154255 | - | 1695 | WP_000482663.1 | flotillin family protein | - |
| QUE31_RS25365 (JNE120442_48440) | 154282..154902 | - | 621 | WP_000176497.1 | DUF1449 family protein | - |
| QUE31_RS25370 (JNE120442_48450) | 155169..155834 | - | 666 | WP_135253098.1 | traC | - |
| QUE31_RS25375 (JNE120442_48460) | 156156..156947 | - | 792 | WP_135253099.1 | DUF4198 domain-containing protein | - |
| QUE31_RS25380 (JNE120442_48470) | 156966..158939 | - | 1974 | WP_135253100.1 | Hemin receptor | VF |
| QUE31_RS25385 | 159164..159850 | - | 687 | WP_106912574.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|