MGE detailed information

MGE type: Prophage        MGE length: 125504 bp
Accession: NZ_AP027254        Location: 1763833..1889336         Organism: Escherichia coli strain JNE120442       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QUE31_RS08840 (1760347) 1760347..1761093 + 747 WP_001317837.1 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG -
QUE31_RS08845 (1761182) 1761182..1761868 + 687 WP_000215552.1 DNA-binding transcriptional regulator rspR -
QUE31_RS08850 (1762045) 1762045..1762248 + 204 WP_000214712.1 putative selenium delivery protein YdfZ -
QUE31_RS08855 (1762284) 1762284..1763744 - 1461 WP_000527790.1 mannitol dehydrogenase family protein -
QUE31_RS08860 (1763833) 1763833..1765200 - 1368 Protein_1734 MHS family MFS transporter -
QUE31_RS08865 (1765721) 1765721..1765834 + 114 WP_120795384.1 YnaM/YnfT family protein -
QUE31_RS08870 (1765903) 1765903..1766136 + 234 WP_000836768.1 cold shock protein YdfK -
QUE31_RS08875 (1766453) 1766453..1767043 + 591 WP_000078177.1 recombinase family protein -
QUE31_RS08880 (1767141) 1767141..1767716 - 576 WP_000885611.1 tail fiber assembly protein -
QUE31_RS08885 (1767716) 1767716..1770790 - 3075 WP_016230955.1 phage tail protein -
QUE31_RS08890 (1770855) 1770855..1771454 - 600 WP_194889390.1 Ail/Lom family outer membrane beta-barrel protein -
QUE31_RS08895 (1771525) 1771525..1775022 - 3498 WP_187178268.1 phage tail protein -
QUE31_RS08900 (1775083) 1775083..1775655 - 573 WP_000847666.1 tail assembly protein -
QUE31_RS08905 (1775652) 1775652..1776395 - 744 WP_032158529.1 C40 family peptidase -
QUE31_RS08910 (1776400) 1776400..1777098 - 699 WP_187178267.1 phage minor tail protein L -
QUE31_RS08915 (1777098) 1777098..1777427 - 330 WP_151130993.1 phage tail protein -
QUE31_RS08920 (1777424) 1777424..1780003 - 2580 WP_000840333.1 phage tail tape measure protein -
QUE31_RS08925 (1779996) 1779996..1780430 - 435 WP_000459457.1 phage tail assembly protein T -
QUE31_RS08930 (1780412) 1780412..1780834 - 423 WP_151130994.1 phage minor tail protein G -
QUE31_RS08935 (1780850) 1780850..1781590 - 741 WP_061158098.1 phage tail protein -
QUE31_RS08940 (1781598) 1781598..1781993 - 396 WP_024200945.1 phage minor tail U family protein -
QUE31_RS08945 (1781990) 1781990..1782568 - 579 WP_286356085.1 phage tail protein -
QUE31_RS08950 (1782580) 1782580..1782933 - 354 WP_000753007.1 head-tail joining protein -
QUE31_RS08955 (1782945) 1782945..1783343 - 399 WP_000158905.1 DNA-packaging protein FI -
QUE31_RS08960 (1783385) 1783385..1784410 - 1026 WP_213198778.1 major capsid protein -
QUE31_RS08965 (1784467) 1784467..1784799 - 333 WP_001295978.1 head decoration protein -
QUE31_RS08970 (1784809) 1784809..1786128 - 1320 WP_000123218.1 S49 family peptidase -
QUE31_RS08975 (1786109) 1786109..1787710 - 1602 WP_001349919.1 phage portal protein -
QUE31_RS08980 (1787707) 1787707..1787913 - 207 WP_000198149.1 gpW family protein -
QUE31_RS08985 (1787910) 1787910..1789835 - 1926 WP_001027259.1 phage terminase large subunit family protein -
QUE31_RS08990 (1789810) 1789810..1790355 - 546 WP_000453611.1 DNA-packaging protein -
QUE31_RS08995 (1790744) 1790744..1790977 + 234 WP_001368374.1 YlcI/YnfO family protein -
QUE31_RS09000 (1791035) 1791035..1791445 + 411 WP_000373090.1 DUF1398 domain-containing protein -
QUE31_RS09005 (1791597) 1791597..1791770 - 174 WP_001019606.1 addiction module toxin, GnsA/GnsB family -
QUE31_RS09010 (1791942) 1791942..1792172 - 231 WP_000720962.1 protein YnfN -
QUE31_RS09015 (1792177) 1792177..1792242 - 66 WP_120795388.1 small protein YnfR -
QUE31_RS09020 (1792245) 1792245..1792433 - 189 WP_071524604.1 cold-shock protein -
QUE31_RS09025 (1792444) 1792444..1792656 - 213 WP_000066495.1 cold shock protein CspI -
QUE31_RS09030 (1793018) 1793018..1793515 - 498 WP_001071769.1 DUF2514 domain-containing protein -
QUE31_RS09035 (1793512) 1793512..1794045 - 534 WP_001092971.1 lysozyme -
QUE31_RS09040 (1794042) 1794042..1794353 - 312 WP_000189916.1 YdfR family protein -
QUE31_RS09045 (1794358) 1794358..1794573 - 216 WP_000839590.1 phage lysis protein EssD -
QUE31_RS09050 (1794793) 1794793..1794963 + 171 WP_211180497.1 putative zinc-binding protein YnfU -
QUE31_RS09055 (1795327) 1795327..1795542 - 216 WP_000066484.1 cold shock-like protein CspB -
QUE31_RS09060 (1795843) 1795843..1796055 + 213 WP_000087756.1 cold shock-like protein CspF -
QUE31_RS09065 (1796110) 1796110..1796199 + 90 WP_120795389.1 hypothetical protein -
QUE31_RS09070 (1796477) 1796477..1797229 - 753 WP_001047135.1 antitermination protein -
QUE31_RS09075 (1797243) 1797243..1798292 - 1050 WP_001265199.1 DUF968 domain-containing protein -
QUE31_RS09080 (1798294) 1798294..1798572 - 279 WP_012304870.1 hypothetical protein -
QUE31_RS09085 (1798639) 1798639..1798890 - 252 WP_000980994.1 protein Rem -
QUE31_RS09090 (1799107) 1799107..1799262 - 156 WP_000813254.1 type I toxin-antitoxin system toxin HokD -
QUE31_RS09095 (1799334) 1799334..1799621 - 288 WP_000323025.1 type II toxin-antitoxin system mRNA interferase RelE Toxin Detail
QUE31_RS09100 (1799621) 1799621..1799860 - 240 WP_000534858.1 type II toxin-antitoxin system antitoxin RelB Antitoxin Detail
QUE31_RS09105 (1799885) 1799885..1800190 + 306 WP_001326990.1 protein YdfV -
QUE31_RS09110 (1800393) 1800393..1800725 + 333 WP_001301033.1 FlxA-like family protein -
QUE31_RS09115 (1801162) 1801162..1801311 - 150 WP_011443592.1 protein YdfW -
QUE31_RS09120 (1801384) 1801384..1802454 - 1071 Protein_1786 ISNCY family transposase -
QUE31_RS09125 (1803244) 1803244..1803531 - 288 Protein_1787 hypothetical protein -
QUE31_RS09130 (1804009) 1804009..1804498 - 490 Protein_1788 class I SAM-dependent methyltransferase -
QUE31_RS09135 (1804495) 1804495..1804917 - 423 WP_001151262.1 DUF977 family protein -
QUE31_RS09140 (1804958) 1804958..1805923 - 966 WP_000054512.1 hypothetical protein -
QUE31_RS09145 (1805904) 1805904..1806425 - 522 WP_000705358.1 toxin YdaT family protein -
QUE31_RS09150 (1806409) 1806409..1806639 - 231 WP_000920568.1 dicB transcriptional regulator DicC -
QUE31_RS09155 (1806723) 1806723..1807130 + 408 WP_000448564.1 DNA-binding transcriptional dual regulator DicA -
QUE31_RS09160 (1807297) 1807297..1807452 + 156 WP_000379575.1 DUF1391 family protein -
QUE31_RS09165 (1807454) 1807454..1807582 + 129 WP_000344964.1 protein YdfB -
QUE31_RS09170 (1807612) 1807612..1807830 + 219 WP_001171942.1 protein YdfC -
QUE31_RS09175 (1808398) 1808398..1808586 + 189 WP_000854559.1 cell division inhibition protein DicB -
QUE31_RS09180 (1808583) 1808583..1808774 + 192 WP_001083297.1 lysis protein YdfD -
QUE31_RS09185 (1808867) 1808867..1811338 + 2472 WP_113993804.1 exonuclease -
QUE31_RS09190 (1811411) 1811411..1811662 + 252 WP_000005552.1 excisionase family protein -
QUE31_RS09195 (1811697) 1811697..1812977 + 1281 WP_000876958.1 site-specific integrase -
QUE31_RS09200 (1813165) 1813165..1814184 - 1020 WP_000836040.1 Zn-dependent oxidoreductase -
QUE31_RS09205 (1814196) 1814196..1815410 - 1215 WP_001295394.1 starvation-sensing protein RspA -
QUE31_RS09210 (1815616) 1815616..1815942 - 327 WP_001295395.1 YnfA family protein -
QUE31_RS09215 (1816077) 1816077..1816418 + 342 WP_042102259.1 DUF1283 family protein -
QUE31_RS09220 (1816453) 1816453..1817013 + 561 WP_001138584.1 spermidine N1-acetyltransferase -
QUE31_RS09225 (1817016) 1817016..1817726 - 711 WP_001445899.1 YnfC family lipoprotein -
QUE31_RS09230 (1817834) 1817834..1818139 + 306 WP_001317855.1 DUF1161 domain-containing protein -
QUE31_RS09235 (1818338) 1818338..1820764 + 2427 WP_286356117.1 DmsA/YnfE/YnfF family dimethyl sulfoxide reductase -
QUE31_RS09240 (1820825) 1820825..1823248 + 2424 WP_001695753.1 DmsA/YnfE/YnfF family dimethyl sulfoxide reductase -
QUE31_RS09245 (1823259) 1823259..1823363 + 105 Protein_1811 4Fe-4S binding protein -
QUE31_RS09250 (1823789) 1823789..1824415 + 627 WP_077166574.1 antA/AntB antirepressor family protein -
QUE31_RS09255 (1824463) 1824463..1824684 + 222 WP_000763355.1 TraR/DksA family transcriptional regulator -
QUE31_RS09260 (1824681) 1824681..1824965 + 285 WP_000020908.1 DUF4752 family protein -
QUE31_RS09265 (1824952) 1824952..1825902 + 951 WP_001378898.1 ead/Ea22-like family protein -
QUE31_RS09270 (1825904) 1825904..1826082 + 179 Protein_1816 hypothetical protein -
QUE31_RS09275 (1826416) 1826416..1827039 + 624 Protein_1817 DUF551 domain-containing protein -
QUE31_RS09280 (1827136) 1827136..1827342 + 207 WP_235777698.1 DUF551 domain-containing protein -
QUE31_RS09285 (1827429) 1827429..1827620 - 192 WP_000481379.1 hypothetical protein -
QUE31_RS09290 (1827744) 1827744..1836128 - 8385 WP_286356118.1 LPD5 domain-containing protein -
QUE31_RS09295 (1836198) 1836198..1837463 - 1266 WP_135301463.1 hypothetical protein -
QUE31_RS09300 (1837474) 1837474..1837725 - 252 WP_033865457.1 hypothetical protein -
QUE31_RS09305 (1837735) 1837735..1838181 - 447 WP_000455652.1 hypothetical protein -
QUE31_RS09310 (1838184) 1838184..1838840 - 657 WP_000509020.1 hypothetical protein -
QUE31_RS09315 (1838933) 1838933..1839334 - 402 WP_135301464.1 hypothetical protein -
QUE31_RS09320 (1839394) 1839394..1839531 - 138 WP_044191818.1 Hok/Gef family protein -
QUE31_RS09325 (1839729) 1839729..1840274 - 546 WP_244075180.1 DUF3672 domain-containing protein -
QUE31_RS09330 (1840251) 1840251..1841414 - 1164 Protein_1828 DUF1983 domain-containing protein -
QUE31_RS09335 (1841411) 1841411..1843036 - 1626 WP_106916306.1 hypothetical protein -
QUE31_RS09340 (1843115) 1843115..1843789 - 675 WP_106916358.1 DUF4376 domain-containing protein -
QUE31_RS09345 (1843801) 1843801..1844013 - 213 WP_000438829.1 hypothetical protein -
QUE31_RS09350 (1844023) 1844023..1846218 - 2196 WP_106916304.1 carboxypeptidase regulatory-like domain-containing protein -
QUE31_RS09355 (1846215) 1846215..1846865 - 651 WP_106889001.1 hypothetical protein -
QUE31_RS09360 (1846865) 1846865..1847428 - 564 WP_106916302.1 hypothetical protein -
QUE31_RS09365 (1847412) 1847412..1847873 - 462 WP_106916300.1 hypothetical protein -
QUE31_RS09370 (1847924) 1847924..1848313 - 390 WP_001140444.1 hypothetical protein -
QUE31_RS09375 (1848368) 1848368..1849582 - 1215 WP_000214474.1 N4-gp56 family major capsid protein -
QUE31_RS09380 (1849606) 1849606..1850613 - 1008 WP_047091030.1 hypothetical protein -
QUE31_RS09385 (1850771) 1850771..1852915 - 2145 WP_106916298.1 portal protein -
QUE31_RS09390 (1852915) 1852915..1854621 - 1707 WP_040078182.1 terminase -
QUE31_RS09395 (1854602) 1854602..1855408 - 807 WP_001086073.1 terminase -
QUE31_RS09400 (1855932) 1855932..1856474 - 543 WP_001109015.1 Rha family transcriptional regulator -
QUE31_RS09405 (1856678) 1856678..1857115 - 438 WP_001082567.1 lysis protein -
QUE31_RS09410 (1857123) 1857123..1857272 - 150 WP_000455400.1 hypothetical protein -
QUE31_RS09415 (1857244) 1857244..1857843 - 600 WP_001056877.1 phage antirepressor N-terminal domain-containing protein -
QUE31_RS09420 (1858116) 1858116..1858649 - 534 WP_000087453.1 lysozyme -
QUE31_RS09425 (1858654) 1858654..1858869 - 216 WP_000284510.1 class II holin family protein -
QUE31_RS09430 (1858947) 1858947..1859192 - 246 WP_001290230.1 DUF826 domain-containing protein -
QUE31_RS09435 (1859233) 1859233..1859412 - 180 WP_000143458.1 DUF1378 family protein -
QUE31_RS09440 (1859550) 1859550..1861490 - 1941 WP_218722413.1 SASA family carbohydrate esterase -
QUE31_RS09445 (1861983) 1861983..1862252 - 270 WP_106916294.1 Shiga toxin Stx1a subunit B -
QUE31_RS09450 (1862262) 1862262..1863209 - 948 WP_000691354.1 Shiga toxin Stx1a subunit A -
QUE31_RS09455 (1863785) 1863785..1864378 - 594 WP_106888961.1 hypothetical protein -
QUE31_RS09460 (1864510) 1864510..1864890 - 381 WP_218722412.1 antiterminator Q family protein -
QUE31_RS09465 (1864883) 1864883..1865077 - 195 WP_000992060.1 protein ninH -
QUE31_RS09470 (1865077) 1865077..1865439 - 363 WP_106916292.1 RusA family crossover junction endodeoxyribonuclease -
QUE31_RS09475 (1865436) 1865436..1865726 - 291 WP_000002239.1 DUF1364 domain-containing protein -
QUE31_RS09480 (1865750) 1865750..1865941 - 192 WP_001254268.1 NinE family protein -
QUE31_RS09485 (1865938) 1865938..1866348 - 411 WP_047199906.1 recombination protein NinB -
QUE31_RS09490 (1866403) 1866403..1867065 - 663 WP_033817290.1 ORF6N domain-containing protein -
QUE31_RS09495 (1867334) 1867334..1867645 - 312 Protein_1861 ORF6N domain-containing protein -
QUE31_RS09500 (1867980) 1867980..1868258 + 279 WP_000597785.1 type II toxin-antitoxin system RelE/ParE family toxin -
QUE31_RS09505 (1868258) 1868258..1868563 + 306 WP_001240641.1 HigA family addiction module antitoxin -
QUE31_RS09510 (1868611) 1868611..1868856 - 246 WP_000354190.1 hypothetical protein -
QUE31_RS09515 (1868855) 1868855..1869529 + 675 WP_106916290.1 DUF4145 domain-containing protein -
QUE31_RS09520 (1869562) 1869562..1869993 - 432 WP_001151119.1 DUF977 family protein -
QUE31_RS09525 (1870008) 1870008..1870778 - 771 WP_106888958.1 DUF1627 domain-containing protein -
QUE31_RS09530 (1870804) 1870804..1871544 - 741 WP_000790394.1 ATP-binding protein -
QUE31_RS09535 (1871551) 1871551..1872633 - 1083 WP_050866384.1 DNA-binding protein -
QUE31_RS09540 (1872654) 1872654..1872782 - 129 WP_000438872.1 hypothetical protein -
QUE31_RS09545 (1872797) 1872797..1873093 - 297 WP_000084292.1 CII family transcriptional regulator -
QUE31_RS09550 (1873237) 1873237..1873464 - 228 WP_001068241.1 hypothetical protein -
QUE31_RS09555 (1873549) 1873549..1874319 + 771 WP_000239215.1 helix-turn-helix transcriptional regulator -
QUE31_RS09560 (1874565) 1874565..1874736 + 172 Protein_1874 hypothetical protein -
QUE31_RS09565 (1874714) 1874714..1874986 + 273 WP_000088198.1 hypothetical protein -
QUE31_RS09570 (1874990) 1874990..1875703 + 714 WP_000211195.1 hypothetical protein -
QUE31_RS09575 (1875735) 1875735..1876091 + 357 WP_001005965.1 hypothetical protein -
QUE31_RS09580 (1876423) 1876423..1876638 + 216 WP_000560215.1 cell division protein FtsZ -
QUE31_RS09585 (1876729) 1876729..1877115 + 387 WP_106916288.1 hypothetical protein -
QUE31_RS09590 (1877224) 1877224..1879275 + 2052 WP_033814559.1 exodeoxyribonuclease VIII -
QUE31_RS09595 (1879272) 1879272..1879568 + 297 WP_000995035.1 host-nuclease inhibitor Gam family protein -
QUE31_RS09600 (1879574) 1879574..1880359 + 786 WP_000100858.1 phage recombination protein Bet -
QUE31_RS09605 (1880356) 1880356..1881036 + 681 WP_000187058.1 YqaJ viral recombinase family protein -
QUE31_RS09610 (1881075) 1881075..1881335 + 261 WP_155018487.1 DUF4222 domain-containing protein -
QUE31_RS09615 (1881370) 1881370..1881477 + 108 Protein_1885 helix-turn-helix domain-containing protein -
QUE31_RS09620 (1881597) 1881597..1882760 + 1164 WP_000051896.1 site-specific integrase -
QUE31_RS09625 (1882801) 1882801..1883352 + 552 WP_000069315.1 dimethylsulfoxide reductase subunit B -
QUE31_RS09630 (1883354) 1883354..1884208 + 855 WP_000526519.1 dimethyl sulfoxide reductase anchor subunit family protein -
QUE31_RS09635 (1884251) 1884251..1884865 + 615 WP_000148698.1 Tat proofreading chaperone DmsD -
QUE31_RS09640 (1885023) 1885023..1886315 + 1293 WP_071586384.1 voltage-gated ClC-type chloride channel ClcB -
QUE31_RS09645 (1886268) 1886268..1886963 - 696 WP_000919226.1 dethiobiotin synthase -
QUE31_RS09650 (1887088) 1887088..1888308 - 1221 WP_000225276.1 DNA-binding transcriptional repressor Mlc -
QUE31_RS09655 (1888443) 1888443..1889336 - 894 WP_001019561.1 LysR family transcriptional regulator -
QUE31_RS09660 (1889443) 1889443..1890696 + 1254 WP_000091847.1 MFS transporter -
QUE31_RS09665 (1891121) 1891121..1891429 + 309 WP_001362115.1 acid resistance repetitive basic protein Asr -
QUE31_RS09670 (1891522) 1891522..1891605 + 84 WP_000233090.1 hypothetical protein -
QUE31_RS09675 (1891705) 1891705..1892526 + 822 WP_001254970.1 serine protease -
QUE31_RS09680 (1892565) 1892565..1892894 - 330 WP_000046661.1 multidrug/spermidine efflux SMR transporter subunit MdtI -
QUE31_RS09685 (1892881) 1892881..1893246 - 366 WP_000276149.1 multidrug/spermidine efflux SMR transporter subunit MdtJ -
QUE31_RS09690 (1893657) 1893657..1893800 + 144 Protein_1900 pheromone autoinducer 2 transporter -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance