MGE detailed information
MGE type: Conjugative plasmid MGE length: 160690 bp
Accession: NZ_AP027247 Location: 1..160690 Organism: Escherichia coli strain JNE120393 Replicon: plasmid pJNE120393-1
Accession: NZ_AP027247 Location: 1..160690 Organism: Escherichia coli strain JNE120393 Replicon: plasmid pJNE120393-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUF33_RS25035 (JNE120393_47900) | 46..1077 | + | 1032 | WP_000907876.1 | plasmid replication initiator RepA | - |
| QUF33_RS25040 (JNE120393_47910) | 2047..2286 | + | 240 | WP_011310132.1 | winged helix-turn-helix transcriptional regulator | - |
| QUF33_RS25045 (JNE120393_47920) | 2739..10832 | + | 8094 | Protein_2 | contact-dependent inhibition toxin CdiA | - |
| QUF33_RS25050 (JNE120393_47930) | 10825..11085 | + | 261 | WP_000038919.1 | hypothetical protein | - |
| QUF33_RS25055 (JNE120393_47940) | 11513..11932 | + | 420 | WP_000422688.1 | transposase | - |
| QUF33_RS25060 (JNE120393_47950) | 11929..12279 | + | 351 | WP_000624657.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| QUF33_RS25065 (JNE120393_47960) | 12310..13902 | + | 1593 | WP_033811929.1 | IS66 family transposase | - |
| QUF33_RS25070 (JNE120393_47970) | 13940..14137 | + | 198 | Protein_7 | transposase domain-containing protein | - |
| QUF33_RS25075 (JNE120393_47980) | 14191..15234 | + | 1044 | WP_000912970.1 | subtilase AB5 cytotoxin subunit A | - |
| QUF33_RS25080 (JNE120393_47985) | 15251..15676 | + | 426 | WP_001373081.1 | subtilase AB5 cytotoxin subunit B | - |
| QUF33_RS25085 (JNE120393_47990) | 15747..15956 | + | 210 | Protein_10 | hypothetical protein | - |
| QUF33_RS25090 (JNE120393_48000) | 15960..16148 | - | 189 | Protein_11 | transposase domain-containing protein | - |
| QUF33_RS25095 | 16225..16392 | + | 168 | Protein_12 | IS110 family transposase | - |
| QUF33_RS25100 (JNE120393_48010) | 16727..17149 | + | 423 | WP_001212725.1 | Exc2 family lipoprotein | - |
| QUF33_RS25105 (JNE120393_48020) | 17410..19497 | - | 2088 | WP_001223214.1 | bifunctional siderophore receptor/adhesin Iha | - |
| QUF33_RS25110 | 19805..20910 | - | 1106 | Protein_15 | IS3 family transposase | - |
| QUF33_RS25115 (JNE120393_48060) | 21119..22612 | - | 1494 | WP_077173497.1 | autoagglutinating adhesin Saa | - |
| QUF33_RS25120 | 22866..22955 | + | 90 | Protein_17 | transposase | - |
| QUF33_RS25125 | 23022..24184 | + | 1163 | Protein_18 | IS3-like element IS3 family transposase | - |
| QUF33_RS25130 (JNE120393_48090) | 24242..24562 | + | 321 | WP_000220092.1 | hypothetical protein | - |
| QUF33_RS25135 (JNE120393_48120) | 25052..25729 | - | 678 | WP_044527425.1 | hypothetical protein | - |
| QUF33_RS25140 (JNE120393_48130) | 25888..26391 | + | 504 | Protein_21 | thermonuclease family protein | - |
| QUF33_RS25145 (JNE120393_48140) | 26771..30673 | + | 3903 | WP_047091594.1 | serine protease autotransporter EspP | - |
| QUF33_RS25150 | 30836..30997 | - | 162 | WP_001365636.1 | hypothetical protein | - |
| QUF33_RS25155 (JNE120393_48150) | 31179..31544 | + | 366 | WP_000997727.1 | hypothetical protein | - |
| QUF33_RS25160 (JNE120393_48160) | 31554..31745 | + | 192 | WP_000264906.1 | hypothetical protein | - |
| QUF33_RS25165 (JNE120393_48170) | 31773..32084 | + | 312 | WP_000203485.1 | hypothetical protein | - |
| QUF33_RS25170 | 32248..32661 | + | 414 | Protein_27 | IS3 family transposase | - |
| QUF33_RS25175 | 32732..32968 | + | 237 | WP_001369996.1 | hypothetical protein | - |
| QUF33_RS25180 (JNE120393_48180) | 33009..33707 | - | 699 | WP_000431492.1 | lactate utilization protein C | - |
| QUF33_RS25185 (JNE120393_48190) | 33712..35127 | - | 1416 | WP_000054160.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| QUF33_RS25190 (JNE120393_48200) | 35138..35857 | - | 720 | WP_001102092.1 | (Fe-S)-binding protein | - |
| QUF33_RS25195 (JNE120393_48210) | 35908..37464 | - | 1557 | WP_000554412.1 | L-lactate permease | - |
| QUF33_RS25200 | 37829..38177 | - | 349 | Protein_33 | integrase core domain-containing protein | - |
| QUF33_RS25205 | 38197..38826 | - | 630 | Protein_34 | transposase | - |
| QUF33_RS25210 | 38931..40456 | - | 1526 | Protein_35 | IS3 family transposase | - |
| QUF33_RS25215 (JNE120393_48260) | 40543..40977 | - | 435 | Protein_36 | transposase | - |
| QUF33_RS25220 | 41307..41854 | - | 548 | Protein_37 | transposase | - |
| QUF33_RS25225 (JNE120393_48300) | 42461..42745 | + | 285 | WP_000439678.1 | adhesin biosynthesis transcription regulatory family protein | - |
| QUF33_RS25230 (JNE120393_48310) | 42966..47273 | + | 4308 | WP_024177480.1 | YadA-like family protein | - |
| QUF33_RS25235 (JNE120393_48320) | 47298..48101 | + | 804 | WP_000899428.1 | outer membrane protein assembly factor BamE | - |
| QUF33_RS25240 | 48529..49044 | + | 516 | WP_001365635.1 | enterohemolysin-activating lysine-acyltransferase EhxC | - |
| QUF33_RS25245 (JNE120393_48350) | 49046..52042 | + | 2997 | WP_000217748.1 | enterohemolysin EhxA | - |
| QUF33_RS25250 (JNE120393_48360) | 52092..54212 | + | 2121 | WP_072094473.1 | enterohemolysin T1SS ABC transporter permease/ATPase EhxB | - |
| QUF33_RS25255 (JNE120393_48370) | 54216..55655 | + | 1440 | WP_001213534.1 | enterohemolysin T1SS ABC transporter subunit EhxD | - |
| QUF33_RS25260 | 55722..55898 | + | 177 | Protein_45 | transcriptional regulator | - |
| QUF33_RS25265 | 55947..56270 | + | 324 | WP_235176086.1 | MarR family transcriptional regulator | - |
| QUF33_RS25270 | 56400..56630 | + | 231 | WP_032279745.1 | hypothetical protein | - |
| QUF33_RS25275 | 56787..57069 | + | 283 | Protein_48 | transposase family protein | - |
| QUF33_RS25280 (JNE120393_48390) | 57308..58285 | - | 978 | WP_001369978.1 | RepB family plasmid replication initiator protein | - |
| QUF33_RS25285 | 59027..59179 | + | 153 | Protein_50 | IS481 family transposase | - |
| QUF33_RS25290 (JNE120393_48400) | 59456..60187 | + | 732 | WP_000850413.1 | conjugal transfer complement resistance protein TraT | - |
| QUF33_RS25295 (JNE120393_48410) | 60297..60617 | + | 321 | WP_001365556.1 | colicin-like pore-forming protein | - |
| QUF33_RS25300 (JNE120393_48440) | 61087..61434 | + | 348 | WP_000142426.1 | DUF6404 family protein | - |
| QUF33_RS25305 (JNE120393_48450) | 61452..62042 | - | 591 | WP_000194569.1 | hypothetical protein | - |
| QUF33_RS25310 (JNE120393_48460) | 62039..62299 | - | 261 | WP_000343100.1 | hypothetical protein | - |
| QUF33_RS25315 (JNE120393_48480) | 62895..63113 | + | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QUF33_RS25320 (JNE120393_48490) | 63115..63420 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QUF33_RS25325 (JNE120393_48500) | 63421..64227 | + | 807 | WP_000016966.1 | site-specific integrase | - |
| QUF33_RS25330 (JNE120393_48510) | 64407..65051 | + | 645 | WP_001144036.1 | ParA family protein | - |
| QUF33_RS25335 (JNE120393_48520) | 65138..65446 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| QUF33_RS25340 | 65861..66840 | + | 980 | Protein_61 | plasmid segregation protein ParM | - |
| QUF33_RS25345 (JNE120393_48550) | 66833..67249 | + | 417 | WP_001278809.1 | plasmid partitioning/stability family protein | - |
| QUF33_RS25350 (JNE120393_48560) | 67251..67424 | - | 174 | Protein_63 | DUF4113 domain-containing protein | - |
| QUF33_RS25355 (JNE120393_48570) | 67454..69046 | - | 1593 | WP_040118371.1 | IS66 family transposase | - |
| QUF33_RS25360 (JNE120393_48580) | 69077..69427 | - | 351 | WP_000624657.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| QUF33_RS25365 (JNE120393_48590) | 69424..69843 | - | 420 | WP_011310111.1 | transposase | - |
| QUF33_RS25370 (JNE120393_48600) | 70348..71139 | - | 792 | WP_000977390.1 | DUF4198 domain-containing protein | - |
| QUF33_RS25375 (JNE120393_48610) | 71158..73131 | - | 1974 | WP_024177478.1 | TonB-dependent receptor | - |
| QUF33_RS25380 (JNE120393_48630) | 73628..73837 | + | 210 | Protein_69 | helix-turn-helix domain-containing protein | - |
| QUF33_RS25385 (JNE120393_48640) | 73833..74525 | + | 693 | Protein_70 | protein YagA | - |
| QUF33_RS25390 (JNE120393_48650) | 74804..76684 | + | 1881 | WP_001283355.1 | colicin Ia central receptor-binding domain-containing protein | - |
| QUF33_RS25395 (JNE120393_48660) | 76702..77049 | - | 348 | WP_000762580.1 | colicin E1 family microcin immunity protein | - |
| QUF33_RS25400 (JNE120393_48670) | 77168..77515 | + | 348 | WP_000142449.1 | DUF6404 family protein | - |
| QUF33_RS25405 (JNE120393_48680) | 77535..78125 | - | 591 | WP_064550099.1 | hypothetical protein | - |
| QUF33_RS25410 | 78125..78376 | - | 252 | WP_031322317.1 | hypothetical protein | - |
| QUF33_RS25415 (JNE120393_48690) | 78781..79083 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| QUF33_RS25420 (JNE120393_48700) | 79080..79706 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| QUF33_RS25425 (JNE120393_48720) | 79902..81172 | - | 1271 | Protein_78 | translesion error-prone DNA polymerase V subunit UmuC | - |
| QUF33_RS25430 (JNE120393_48730) | 81172..81609 | - | 438 | WP_000109074.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QUF33_RS25435 (JNE120393_48740) | 81606..81854 | - | 249 | WP_000618108.1 | DinI-like family protein | - |
| QUF33_RS25440 (JNE120393_48750) | 82273..83175 | + | 903 | WP_077629773.1 | DUF1281 domain-containing protein | - |
| QUF33_RS25445 | 83179..83484 | + | 306 | WP_032236829.1 | hypothetical protein | - |
| QUF33_RS25450 (JNE120393_48760) | 83561..84244 | + | 684 | WP_000086114.1 | DNA methylase | - |
| QUF33_RS25455 (JNE120393_48770) | 84245..84466 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| QUF33_RS25460 (JNE120393_48780) | 84396..84914 | + | 519 | WP_224065154.1 | DUF1380 family protein | - |
| QUF33_RS25465 | 84959..85636 | + | 678 | Protein_86 | hypothetical protein | - |
| QUF33_RS25470 | 85679..86212 | + | 534 | WP_001276132.1 | single-stranded DNA-binding protein | - |
| QUF33_RS25475 (JNE120393_48800) | 86270..86503 | + | 234 | WP_000006027.1 | DUF905 domain-containing protein | - |
| QUF33_RS25480 (JNE120393_48810) | 86563..88521 | + | 1959 | WP_064550101.1 | ParB/RepB/Spo0J family partition protein | - |
| QUF33_RS25485 (JNE120393_48820) | 88576..89010 | + | 435 | WP_000845900.1 | conjugation system SOS inhibitor PsiB | - |
| QUF33_RS25490 (JNE120393_48830) | 89007..89726 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| QUF33_RS25495 (JNE120393_48840) | 89723..90319 | + | 597 | WP_000978008.1 | hypothetical protein | - |
| QUF33_RS25500 (JNE120393_48860) | 90784..91284 | + | 501 | WP_000117617.1 | antirestriction protein ArdA | - |
| QUF33_RS25505 (JNE120393_48870) | 92017..92451 | + | 435 | WP_000218848.1 | hypothetical protein | - |
| QUF33_RS25510 (JNE120393_48880) | 92544..92810 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| QUF33_RS25515 (JNE120393_48890) | 92875..93801 | + | 927 | WP_000038346.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| QUF33_RS25520 (JNE120393_48900) | 93801..94034 | + | 234 | WP_001370006.1 | hypothetical protein | - |
| QUF33_RS25525 (JNE120393_48910) | 94065..94316 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| QUF33_RS25530 (JNE120393_48920) | 94895..95743 | + | 849 | WP_001077013.1 | DUF4942 domain-containing protein | - |
| QUF33_RS25535 (JNE120393_48930) | 95828..96163 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| QUF33_RS25540 (JNE120393_48940) | 96395..96727 | + | 333 | WP_001291058.1 | plasmid mobilization protein MobA | - |
| QUF33_RS25545 (JNE120393_48950) | 96739..99450 | + | 2712 | WP_000991390.1 | relaxase/mobilization nuclease domain-containing protein | - |
| QUF33_RS25550 (JNE120393_48960) | 99518..99949 | + | 432 | WP_001335086.1 | cell envelope integrity TolA C-terminal domain-containing protein | - |
| QUF33_RS25555 (JNE120393_48970) | 100047..100349 | - | 303 | WP_000334995.1 | hypothetical protein | - |
| QUF33_RS25560 (JNE120393_48980) | 100475..102778 | - | 2304 | WP_000077647.1 | F-type conjugative transfer protein TrbC | - |
| QUF33_RS25565 (JNE120393_48990) | 102759..103877 | - | 1119 | WP_000155605.1 | DsbC family protein | - |
| QUF33_RS25570 (JNE120393_49000) | 103874..105145 | - | 1272 | WP_000121915.1 | IncI1-type conjugal transfer protein TrbA | - |
| QUF33_RS25575 | 105690..105785 | + | 96 | WP_000609151.1 | DinQ-like type I toxin DqlB | - |
| QUF33_RS25580 (JNE120393_49010) | 105928..106239 | - | 312 | WP_000203481.1 | hypothetical protein | - |
| QUF33_RS25585 (JNE120393_49020) | 106267..106458 | - | 192 | WP_000264906.1 | hypothetical protein | - |
| QUF33_RS25590 (JNE120393_49030) | 106468..106833 | - | 366 | WP_000997722.1 | hypothetical protein | - |
| QUF33_RS25595 | 106967..107092 | + | 126 | WP_001344629.1 | hypothetical protein | - |
| QUF33_RS25600 (JNE120393_49040) | 107340..111419 | - | 4080 | WP_001034114.1 | serine protease autotransporter EpeA | - |
| QUF33_RS25605 (JNE120393_49050) | 111866..112279 | - | 414 | WP_000598952.1 | thermonuclease family protein | - |
| QUF33_RS25610 (JNE120393_49060) | 112438..113061 | + | 624 | WP_001158018.1 | hypothetical protein | - |
| QUF33_RS25615 | 113149..113604 | + | 456 | WP_001205143.1 | DUF2569 family protein | - |
| QUF33_RS25620 (JNE120393_49070) | 113805..115340 | + | 1536 | WP_001373098.1 | phosphoethanolamine transferase | - |
| QUF33_RS25625 (JNE120393_49080) | 115433..115675 | - | 243 | WP_001398505.1 | hypothetical protein | - |
| QUF33_RS25630 (JNE120393_49090) | 116009..116161 | + | 153 | WP_001367784.1 | Hok/Gef family protein | - |
| QUF33_RS25635 (JNE120393_49100) | 116299..117885 | - | 1587 | WP_000004566.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| QUF33_RS25640 | 118159..118809 | - | 651 | WP_001098359.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QUF33_RS25645 (JNE120393_49120) | 118880..121045 | - | 2166 | WP_064550079.1 | DotA/TraY family protein | - |
| QUF33_RS25650 (JNE120393_49130) | 121118..121687 | - | 570 | WP_000650755.1 | conjugal transfer protein TraX | - |
| QUF33_RS25655 (JNE120393_49140) | 121684..122889 | - | 1206 | WP_001189539.1 | conjugal transfer protein TraW | - |
| QUF33_RS25660 (JNE120393_49150) | 122850..123467 | - | 618 | WP_000286857.1 | hypothetical protein | - |
| QUF33_RS25665 (JNE120393_49160) | 123467..126511 | - | 3045 | WP_001024761.1 | hypothetical protein | - |
| QUF33_RS25670 | 126686..127069 | - | 384 | WP_011310086.1 | hypothetical protein | - |
| QUF33_RS25675 (JNE120393_49170) | 127066..127425 | - | 360 | WP_000380399.1 | hypothetical protein | - |
| QUF33_RS25680 (JNE120393_49180) | 127480..128298 | - | 819 | WP_072094468.1 | conjugal transfer protein TraT | - |
| QUF33_RS25685 (JNE120393_49190) | 128213..128464 | - | 252 | WP_001277575.1 | hypothetical protein | - |
| QUF33_RS25690 (JNE120393_49200) | 128521..128919 | - | 399 | WP_000086066.1 | hypothetical protein | - |
| QUF33_RS25695 (JNE120393_49210) | 128966..129496 | - | 531 | WP_000987018.1 | conjugal transfer protein TraQ | - |
| QUF33_RS25700 | 129493..130206 | - | 714 | WP_000787005.1 | conjugal transfer protein TraP | - |
| QUF33_RS25705 (JNE120393_49240) | 130203..131534 | - | 1332 | WP_001272010.1 | conjugal transfer protein TraO | - |
| QUF33_RS25710 (JNE120393_49250) | 131538..132512 | - | 975 | WP_001165562.1 | DotH/IcmK family type IV secretion protein | - |
| QUF33_RS25715 (JNE120393_49270) | 132523..133218 | - | 696 | WP_001287263.1 | DotI/IcmL family type IV secretion protein | - |
| QUF33_RS25720 (JNE120393_49280) | 133230..133580 | - | 351 | WP_001056369.1 | hypothetical protein | - |
| QUF33_RS25725 (JNE120393_49290) | 133597..137613 | - | 4017 | WP_033811931.1 | DUF5710 domain-containing protein | - |
| QUF33_RS25730 (JNE120393_49300) | 137677..137967 | - | 291 | WP_000817799.1 | hypothetical protein | - |
| QUF33_RS25735 (JNE120393_49310) | 137964..139112 | - | 1149 | WP_000625247.1 | plasmid transfer ATPase TraJ | - |
| QUF33_RS25740 (JNE120393_49320) | 139096..139932 | - | 837 | WP_000848138.1 | type IV secretory system conjugative DNA transfer family protein | - |
| QUF33_RS25745 (JNE120393_49330) | 139929..140381 | - | 453 | WP_001081198.1 | DotD/TraH family lipoprotein | - |
| QUF33_RS25750 | 140740..141941 | - | 1202 | Protein_143 | conjugal transfer protein TraF | - |
| QUF33_RS25755 (JNE120393_49370) | 142031..142852 | - | 822 | WP_000804094.1 | hypothetical protein | - |
| QUF33_RS25760 (JNE120393_49380) | 143112..143432 | + | 321 | WP_000695056.1 | hypothetical protein | - |
| QUF33_RS25765 (JNE120393_49390) | 143524..143814 | - | 291 | WP_000681897.1 | hypothetical protein | - |
| QUF33_RS25770 | 143856..144014 | - | 159 | Protein_147 | integrase | - |
| QUF33_RS25775 (JNE120393_49410) | 144272..145636 | - | 1365 | WP_001168071.1 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| QUF33_RS25780 (JNE120393_49420) | 145641..146276 | - | 636 | WP_000478595.1 | prepilin peptidase | - |
| QUF33_RS25785 (JNE120393_49430) | 146295..146768 | - | 474 | WP_000870986.1 | lytic transglycosylase domain-containing protein | - |
| QUF33_RS25790 (JNE120393_49440) | 146822..147358 | - | 537 | WP_001011156.1 | type 4 pilus major pilin | - |
| QUF33_RS25795 (JNE120393_49450) | 147432..148532 | - | 1101 | WP_000670139.1 | type II secretion system F family protein | - |
| QUF33_RS25800 (JNE120393_49460) | 148534..150042 | - | 1509 | WP_000886636.1 | ATPase, T2SS/T4P/T4SS family | - |
| QUF33_RS25805 (JNE120393_49470) | 150127..150579 | - | 453 | WP_001112923.1 | type IV pilus biogenesis protein PilP | - |
| QUF33_RS25810 (JNE120393_49480) | 150569..151864 | - | 1296 | WP_000129891.1 | type 4b pilus protein PilO2 | - |
| QUF33_RS25815 (JNE120393_49490) | 151885..153504 | - | 1620 | WP_001034996.1 | PilN family type IVB pilus formation outer membrane protein | - |
| QUF33_RS25820 (JNE120393_49500) | 153535..153972 | - | 438 | WP_000539684.1 | type IV pilus biogenesis protein PilM | - |
| QUF33_RS25825 | 153977..155047 | - | 1071 | WP_001170190.1 | toxin co-regulated pilus biosynthesis Q family protein | - |
| QUF33_RS25830 | 155204..155506 | - | 303 | Protein_159 | hypothetical protein | - |
| QUF33_RS25835 (JNE120393_49530) | 155656..155898 | - | 243 | WP_077888482.1 | PilI type IV pilus biogenesis protein | - |
| QUF33_RS25840 (JNE120393_49540) | 155979..157673 | - | 1695 | WP_000482662.1 | flotillin family protein | - |
| QUF33_RS25845 (JNE120393_49550) | 157700..158320 | - | 621 | WP_000176499.1 | DUF1449 family protein | - |
| QUF33_RS25850 (JNE120393_49560) | 158587..159252 | - | 666 | WP_000154144.1 | hypothetical protein | - |
| QUF33_RS25855 | 159393..160034 | - | 642 | WP_000335846.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|