MGE detailed information
MGE type: Conjugative plasmid MGE length: 86192 bp
Accession: NZ_AP027219 Location: 1..86192 Organism: Escherichia coli strain JNE170426 Replicon: plasmid pJNE170426-2
Accession: NZ_AP027219 Location: 1..86192 Organism: Escherichia coli strain JNE170426 Replicon: plasmid pJNE170426-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE10_RS25345 (JNE170426_p20010) | 1..873 | + | 873 | WP_021553143.1 | incFII family plasmid replication initiator RepA | - |
| QUE10_RS25350 | 1569..1727 | + | 159 | WP_032153484.1 | hypothetical protein | - |
| QUE10_RS25355 (JNE170426_p20020) | 1782..2051 | + | 270 | WP_000079928.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QUE10_RS25360 (JNE170426_p20030) | 2051..2329 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QUE10_RS25365 (JNE170426_p20040) | 2375..3223 | + | 849 | WP_021511698.1 | 3'-5' exonuclease | - |
| QUE10_RS25370 | 3986..4612 | + | 627 | WP_021511696.1 | ProQ/FINO family protein | - |
| QUE10_RS25375 (JNE170426_p20060) | 4549..6135 | + | 1587 | WP_244060170.1 | UvrD-helicase domain-containing protein | - |
| QUE10_RS25380 (JNE170426_p20070) | 6246..6797 | - | 552 | WP_001760564.1 | plasmid partitioning/stability family protein | - |
| QUE10_RS25385 (JNE170426_p20080) | 6809..7780 | - | 972 | WP_001760566.1 | plasmid segregation protein ParM | - |
| QUE10_RS25390 | 8041..8316 | + | 276 | WP_172686524.1 | hypothetical protein | - |
| QUE10_RS25395 (JNE170426_p20090) | 9016..10740 | + | 1725 | WP_000138832.1 | group II intron reverse transcriptase/maturase | - |
| QUE10_RS25400 (JNE170426_p20100) | 10817..11719 | + | 903 | WP_077631593.1 | DUF1281 domain-containing protein | - |
| QUE10_RS25405 | 11723..12028 | + | 306 | WP_032150335.1 | hypothetical protein | - |
| QUE10_RS25410 (JNE170426_p20110) | 12104..12787 | + | 684 | WP_021511694.1 | DNA methylase | - |
| QUE10_RS25415 (JNE170426_p20120) | 12788..13009 | + | 222 | WP_021511693.1 | hypothetical protein | - |
| QUE10_RS25420 (JNE170426_p20130) | 12990..13457 | + | 468 | WP_225384886.1 | DUF1380 family protein | - |
| QUE10_RS25425 (JNE170426_p20140) | 13502..14272 | + | 771 | WP_021511692.1 | hypothetical protein | - |
| QUE10_RS25430 (JNE170426_p20160) | 14688..15113 | + | 426 | WP_021511690.1 | antirestriction protein | - |
| QUE10_RS25435 (JNE170426_p20170) | 15160..15582 | + | 423 | WP_001546488.1 | DUF1380 family protein | - |
| QUE10_RS25440 (JNE170426_p20180) | 15579..15770 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| QUE10_RS25445 | 15908..16189 | + | 282 | WP_154671919.1 | hypothetical protein | - |
| QUE10_RS25450 (JNE170426_p20190) | 16542..17069 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| QUE10_RS25455 (JNE170426_p20200) | 17127..17360 | + | 234 | WP_000006024.1 | DUF905 domain-containing protein | - |
| QUE10_RS25460 (JNE170426_p20210) | 17419..19377 | + | 1959 | WP_001145479.1 | ParB/RepB/Spo0J family partition protein | - |
| QUE10_RS25465 (JNE170426_p20220) | 19432..19866 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| QUE10_RS25470 (JNE170426_p20230) | 19863..20582 | + | 720 | WP_001276262.1 | plasmid SOS inhibition protein A | - |
| QUE10_RS25475 (JNE170426_p20240) | 20579..21175 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| QUE10_RS25480 (JNE170426_p20260) | 21637..22137 | + | 501 | WP_000117624.1 | antirestriction protein ArdA | - |
| QUE10_RS25485 (JNE170426_p20270) | 22868..23302 | + | 435 | WP_000218850.1 | hypothetical protein | - |
| QUE10_RS25490 (JNE170426_p20280) | 23395..23661 | + | 267 | WP_001247861.1 | hypothetical protein | - |
| QUE10_RS25495 (JNE170426_p20290) | 23852..24241 | + | 390 | WP_001317525.1 | hypothetical protein | - |
| QUE10_RS25500 (JNE170426_p20300) | 24238..25164 | + | 927 | WP_000038345.1 | Recombination-promoting nuclease RpnA | VF |
| QUE10_RS25505 (JNE170426_p20310) | 25164..25385 | + | 222 | WP_009453089.1 | hypothetical protein | - |
| QUE10_RS25510 (JNE170426_p20320) | 25416..25667 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| QUE10_RS25515 (JNE170426_p20330) | 26246..27094 | + | 849 | WP_244060167.1 | DUF4942 domain-containing protein | - |
| QUE10_RS25520 (JNE170426_p20340) | 27180..27515 | - | 336 | WP_021511722.1 | hypothetical protein | - |
| QUE10_RS25525 (JNE170426_p20350) | 27748..28080 | + | 333 | WP_021511720.1 | plasmid mobilization protein MobA | - |
| QUE10_RS25530 (JNE170426_p20360) | 28092..30812 | + | 2721 | WP_021540574.1 | Protein TraI | Relaxase |
| QUE10_RS25535 (JNE170426_p20370) | 31033..33333 | - | 2301 | WP_021553151.1 | F-type conjugative transfer protein TrbC | - |
| QUE10_RS25540 (JNE170426_p20380) | 33314..34438 | - | 1125 | WP_000152384.1 | DsbC family protein | - |
| QUE10_RS25545 (JNE170426_p20390) | 34435..35787 | - | 1353 | WP_185737925.1 | conjugal transfer protein TrbA | - |
| QUE10_RS25550 | 36125..36271 | + | 147 | WP_001346191.1 | hypothetical protein | - |
| QUE10_RS25555 | 36324..36419 | + | 96 | WP_001363141.1 | DinQ-like type I toxin DqlB | - |
| QUE10_RS25560 | 37008..37103 | + | 96 | WP_001363141.1 | DinQ-like type I toxin DqlB | - |
| QUE10_RS25565 (JNE170426_p20410) | 37166..37342 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| QUE10_RS25570 (JNE170426_p20420) | 37493..37960 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| QUE10_RS25575 (JNE170426_p20430) | 38120..38743 | + | 624 | WP_021511712.1 | helix-turn-helix domain-containing protein | - |
| QUE10_RS25580 (JNE170426_p20450) | 38941..39156 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| QUE10_RS25585 (JNE170426_p20460) | 39160..39528 | - | 369 | WP_001302696.1 | hypothetical protein | - |
| QUE10_RS25590 | 39540..39731 | - | 192 | WP_000751583.1 | hypothetical protein | - |
| QUE10_RS25595 (JNE170426_p20470) | 39827..40069 | - | 243 | WP_000650933.1 | hypothetical protein | - |
| QUE10_RS25600 | 40398..40550 | + | 153 | WP_001302699.1 | Hok/Gef family protein | - |
| QUE10_RS25605 (JNE170426_p20480) | 40637..41125 | - | 489 | WP_001443703.1 | GNAT family N-acetyltransferase | - |
| QUE10_RS25610 (JNE170426_p20490) | 41131..41412 | - | 282 | WP_016232751.1 | DUF1778 domain-containing protein | - |
| QUE10_RS25615 | 41568..42218 | - | 651 | WP_021511710.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QUE10_RS25620 (JNE170426_p20510) | 42306..44465 | - | 2160 | WP_021553149.1 | DotA/TraY family protein | - |
| QUE10_RS25625 (JNE170426_p20520) | 44540..45109 | - | 570 | WP_048227962.1 | conjugal transfer protein TraX | - |
| QUE10_RS25630 (JNE170426_p20530) | 45106..46311 | - | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| QUE10_RS25635 (JNE170426_p20540) | 46269..46889 | - | 621 | WP_048227964.1 | hypothetical protein | - |
| QUE10_RS25640 (JNE170426_p20550) | 46889..49933 | - | 3045 | WP_021529221.1 | hypothetical protein | - |
| QUE10_RS25645 | 50109..50492 | - | 384 | WP_225394224.1 | hypothetical protein | - |
| QUE10_RS25650 (JNE170426_p20560) | 50489..50848 | - | 360 | WP_000380400.1 | hypothetical protein | - |
| QUE10_RS25655 (JNE170426_p20570) | 50903..51721 | - | 819 | WP_072107751.1 | conjugal transfer protein TraT | - |
| QUE10_RS25660 (JNE170426_p20580) | 51636..51887 | - | 252 | WP_001277573.1 | hypothetical protein | - |
| QUE10_RS25665 (JNE170426_p20590) | 51944..52342 | - | 399 | WP_048227965.1 | hypothetical protein | - |
| QUE10_RS25670 (JNE170426_p20600) | 52391..52921 | - | 531 | WP_244060206.1 | conjugal transfer protein TraQ | - |
| QUE10_RS25675 (JNE170426_p20610) | 52918..53631 | - | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| QUE10_RS25680 (JNE170426_p20620) | 53628..54965 | - | 1338 | WP_001272017.1 | conjugal transfer protein TraO | - |
| QUE10_RS25685 (JNE170426_p20630) | 54969..55943 | - | 975 | WP_048227966.1 | hypothetical protein | VF |
| QUE10_RS25690 (JNE170426_p20640) | 55954..56649 | - | 696 | WP_001287545.1 | DotI/IcmL family type IV secretion protein | - |
| QUE10_RS25695 (JNE170426_p20650) | 56661..57011 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| QUE10_RS25700 (JNE170426_p20660) | 57028..61089 | - | 4062 | WP_048227900.1 | DUF5710 domain-containing protein | - |
| QUE10_RS25705 (JNE170426_p20670) | 61153..61443 | - | 291 | WP_000817799.1 | hypothetical protein | - |
| QUE10_RS25710 (JNE170426_p20680) | 61440..62588 | - | 1149 | WP_000625247.1 | putative protein YggR | VF |
| QUE10_RS25715 (JNE170426_p20690) | 62572..63408 | - | 837 | WP_000848138.1 | hypothetical protein | VF |
| QUE10_RS25720 (JNE170426_p20700) | 63405..63857 | - | 453 | WP_001081199.1 | DotD/TraH family lipoprotein | - |
| QUE10_RS25725 | 63906..64076 | - | 171 | WP_001597011.1 | hypothetical protein | - |
| QUE10_RS25730 (JNE170426_p20710) | 64216..65418 | - | 1203 | WP_021553145.1 | conjugal transfer protein TraF | - |
| QUE10_RS25735 (JNE170426_p20720) | 65520..66341 | - | 822 | WP_021511762.1 | hypothetical protein | - |
| QUE10_RS25740 (JNE170426_p20730) | 66554..67678 | - | 1125 | WP_021511763.1 | site-specific integrase | - |
| QUE10_RS25745 | 68703..69062 | + | 360 | WP_225092544.1 | shufflon protein B | - |
| QUE10_RS25750 (JNE170426_p20750) | 69487..69726 | + | 240 | WP_000271302.1 | hypothetical protein | - |
| QUE10_RS25755 (JNE170426_p20760) | 69731..71095 | - | 1365 | WP_286347590.1 | hypothetical protein | VF |
| QUE10_RS25760 (JNE170426_p20770) | 71100..71735 | - | 636 | WP_000478594.1 | prepilin peptidase | - |
| QUE10_RS25765 (JNE170426_p20780) | 71754..72227 | - | 474 | WP_000870986.1 | hypothetical protein | VF |
| QUE10_RS25770 (JNE170426_p20790) | 72281..72817 | - | 537 | WP_001011158.1 | type 4 pilus major pilin | - |
| QUE10_RS25775 (JNE170426_p20800) | 72891..73991 | - | 1101 | WP_000670138.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| QUE10_RS25780 (JNE170426_p20810) | 73993..75501 | - | 1509 | WP_000886636.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| QUE10_RS25785 (JNE170426_p20820) | 75586..76038 | - | 453 | WP_001112925.1 | type IV pilus biogenesis protein PilP | - |
| QUE10_RS25790 (JNE170426_p20830) | 76028..77323 | - | 1296 | WP_000129889.1 | type 4b pilus protein PilO2 | - |
| QUE10_RS25795 (JNE170426_p20840) | 77344..78963 | - | 1620 | WP_001034998.1 | Outer membrane lipoprotein BfpB | VF |
| QUE10_RS25800 (JNE170426_p20850) | 78994..79431 | - | 438 | WP_000539685.1 | type IV pilus biogenesis protein PilM | - |
| QUE10_RS25805 | 79436..80503 | - | 1068 | WP_286347591.1 | hypothetical protein | VF |
| QUE10_RS25810 (JNE170426_p20870) | 80660..80995 | - | 336 | WP_024174020.1 | hypothetical protein | - |
| QUE10_RS25815 (JNE170426_p20880) | 81112..81354 | - | 243 | WP_001271734.1 | PilI type IV pilus biogenesis protein | - |
| QUE10_RS25820 (JNE170426_p20890) | 81435..83129 | - | 1695 | WP_000482663.1 | flotillin family protein | - |
| QUE10_RS25825 (JNE170426_p20900) | 83156..83776 | - | 621 | WP_000176497.1 | DUF1449 family protein | - |
| QUE10_RS25830 (JNE170426_p20910) | 84043..84708 | - | 666 | WP_047084054.1 | hypothetical protein | - |
| QUE10_RS25835 (JNE170426_p20920) | 84849..85355 | - | 507 | WP_024196300.1 | transcription termination/antitermination NusG family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|