MGE detailed information
MGE type: Prophage MGE length: 55450 bp
Accession: NZ_AP027181 Location: 2171071..2226520 Organism: Escherichia coli strain 98E11 Replicon: chromosome
Accession: NZ_AP027181 Location: 2171071..2226520 Organism: Escherichia coli strain 98E11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMG82_RS11400 (2168020) | 2168020..2168766 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| QMG82_RS11405 (2168855) | 2168855..2169541 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| QMG82_RS11410 (2169719) | 2169719..2169922 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| QMG82_RS11415 (2169958) | 2169958..2171418 | - | 1461 | Protein_2237 | mannitol dehydrogenase family protein | - |
| QMG82_RS11420 (2171507) | 2171507..2172790 | - | 1284 | Protein_2238 | MHS family MFS transporter YdfJ | - |
| QMG82_RS11425 (2173393) | 2173393..2173506 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| QMG82_RS11430 (2173575) | 2173575..2173808 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| QMG82_RS11435 (2174125) | 2174125..2174715 | + | 591 | WP_000086514.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| QMG82_RS11440 (2174813) | 2174813..2175388 | - | 576 | WP_000885616.1 | tail fiber assembly protein | - |
| QMG82_RS11445 (2175388) | 2175388..2178348 | - | 2961 | WP_001448491.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QMG82_RS11450 (2178413) | 2178413..2179012 | - | 600 | WP_064579292.1 | hypothetical protein | VF |
| QMG82_RS11455 (2179083) | 2179083..2182496 | - | 3414 | WP_000515505.1 | host specificity protein J | - |
| QMG82_RS11460 (2182557) | 2182557..2183204 | - | 648 | WP_000741589.1 | tail assembly protein | - |
| QMG82_RS11465 (2183102) | 2183102..2183845 | - | 744 | WP_032194412.1 | C40 family peptidase | - |
| QMG82_RS11470 (2183851) | 2183851..2184549 | - | 699 | WP_032348552.1 | phage minor tail protein L | - |
| QMG82_RS11475 (2184559) | 2184559..2184888 | - | 330 | WP_000447251.1 | phage tail protein | - |
| QMG82_RS11480 (2184888) | 2184888..2187953 | - | 3066 | WP_000372024.1 | phage tail tape measure protein | - |
| QMG82_RS11485 (2187925) | 2187925..2188254 | - | 330 | WP_001161009.1 | phage tail assembly protein T | - |
| QMG82_RS11490 (2188263) | 2188263..2188649 | - | 387 | WP_001341514.1 | phage minor tail protein G | - |
| QMG82_RS11495 (2188710) | 2188710..2189453 | - | 744 | WP_000211132.1 | Ig domain-containing protein | - |
| QMG82_RS11500 (2189464) | 2189464..2189865 | - | 402 | WP_001079398.1 | phage minor tail U family protein | - |
| QMG82_RS11505 (2189862) | 2189862..2190440 | - | 579 | WP_000677128.1 | phage tail protein | - |
| QMG82_RS11510 (2190452) | 2190452..2190727 | - | 276 | WP_001283148.1 | DNA breaking-rejoining protein | - |
| QMG82_RS11515 (2190720) | 2190720..2191043 | - | 324 | WP_001097041.1 | DUF2190 family protein | - |
| QMG82_RS11520 (2191130) | 2191130..2193157 | - | 2028 | WP_001136588.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| QMG82_RS11525 (2193102) | 2193102..2194610 | - | 1509 | WP_000985929.1 | phage portal protein | - |
| QMG82_RS11530 (2194610) | 2194610..2194822 | - | 213 | WP_001072975.1 | hypothetical protein | - |
| QMG82_RS11535 (2194819) | 2194819..2196918 | - | 2100 | WP_000507036.1 | phage terminase large subunit family protein | - |
| QMG82_RS11540 (2196927) | 2196927..2197454 | - | 528 | WP_001389340.1 | DUF1441 family protein | - |
| QMG82_RS11545 (2198027) | 2198027..2198233 | - | 207 | WP_001031435.1 | hypothetical protein | - |
| QMG82_RS11550 (2198534) | 2198534..2198944 | + | 411 | WP_000035577.1 | DUF1398 domain-containing protein | - |
| QMG82_RS11555 (2199096) | 2199096..2199269 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| QMG82_RS11560 (2199441) | 2199441..2199671 | - | 231 | WP_000720962.1 | protein YnfN | - |
| QMG82_RS11565 (2199676) | 2199676..2199741 | - | 66 | WP_122134696.1 | small protein YnfR | - |
| QMG82_RS11570 (2199744) | 2199744..2199932 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| QMG82_RS11575 (2199943) | 2199943..2200155 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| QMG82_RS11580 (2200518) | 2200518..2201015 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| QMG82_RS11585 (2201012) | 2201012..2201545 | - | 534 | WP_001092971.1 | lysozyme | - |
| QMG82_RS11590 (2201542) | 2201542..2201853 | - | 312 | WP_000189915.1 | YdfR family protein | - |
| QMG82_RS11595 (2201858) | 2201858..2202073 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| QMG82_RS11600 (2202293) | 2202293..2202463 | + | 171 | WP_001405948.1 | putative zinc-binding protein YnfU | - |
| QMG82_RS11605 (2202827) | 2202827..2203042 | - | 216 | WP_000066483.1 | cold shock-like protein CspB | - |
| QMG82_RS11610 (2203343) | 2203343..2203555 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| QMG82_RS11615 (2203610) | 2203610..2203699 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| QMG82_RS11620 (2203977) | 2203977..2204729 | - | 753 | WP_001047133.1 | antitermination protein | - |
| QMG82_RS11625 (2204743) | 2204743..2205792 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| QMG82_RS11630 (2205794) | 2205794..2206072 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| QMG82_RS11635 (2206139) | 2206139..2206390 | - | 252 | WP_000980994.1 | protein Rem | - |
| QMG82_RS11640 (2206607) | 2206607..2206762 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QMG82_RS11645 (2206834) | 2206834..2207121 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QMG82_RS11650 (2207121) | 2207121..2207360 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QMG82_RS11655 (2207385) | 2207385..2207690 | + | 306 | WP_001326990.1 | protein YdfV | - |
| QMG82_RS11660 (2207893) | 2207893..2208225 | + | 333 | WP_001317460.1 | FlxA-like family protein | - |
| QMG82_RS11665 (2208662) | 2208662..2208811 | - | 150 | WP_180302674.1 | ISNCY family transposase ISCARN112 | Transposase |
| QMG82_RS11670 (2208884) | 2208884..2209981 | - | 1098 | Protein_2288 | ISNCY family transposase ISCARN112 | Transposase |
| QMG82_RS11675 (2210036) | 2210036..2210455 | - | 420 | WP_001151195.1 | DUF977 family protein | - |
| QMG82_RS11680 (2210496) | 2210496..2211461 | - | 966 | WP_000054507.1 | hypothetical protein | - |
| QMG82_RS11685 (2211442) | 2211442..2211963 | - | 522 | WP_000705349.1 | toxin YdaT family protein | - |
| QMG82_RS11690 (2211947) | 2211947..2212174 | - | 228 | WP_000476993.1 | Cro/CI family transcriptional regulator | - |
| QMG82_RS11695 (2212252) | 2212252..2212659 | + | 408 | WP_001003381.1 | helix-turn-helix domain-containing protein | - |
| QMG82_RS11700 (2212852) | 2212852..2213007 | + | 156 | WP_000379589.1 | DUF1391 family protein | - |
| QMG82_RS11705 (2213009) | 2213009..2213110 | + | 102 | Protein_2295 | protein YdfB | - |
| QMG82_RS11710 (2214071) | 2214071..2214259 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| QMG82_RS11715 (2214256) | 2214256..2214447 | + | 192 | WP_001083280.1 | lysis protein YdfD | - |
| QMG82_RS11720 (2214541) | 2214541..2217012 | + | 2472 | WP_000048369.1 | exonuclease | - |
| QMG82_RS11725 (2217085) | 2217085..2217177 | + | 93 | Protein_2299 | excisionase family protein | - |
| QMG82_RS11730 (2217208) | 2217208..2218779 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| QMG82_RS11735 (2218799) | 2218799..2219146 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| QMG82_RS11740 (2219146) | 2219146..2219823 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| QMG82_RS11745 (2219879) | 2219879..2220043 | + | 165 | Protein_2303 | excisionase family protein | - |
| QMG82_RS11750 (2220078) | 2220078..2221358 | + | 1281 | WP_000877011.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| QMG82_RS11755 (2221546) | 2221546..2222565 | - | 1020 | WP_000836079.1 | Zn-dependent oxidoreductase | - |
| QMG82_RS11760 (2222577) | 2222577..2223791 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| QMG82_RS11765 (2223997) | 2223997..2224323 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| QMG82_RS11770 (2224458) | 2224458..2224799 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| QMG82_RS11775 (2224834) | 2224834..2225394 | + | 561 | WP_001138576.1 | spermidine N1-acetyltransferase | - |
| QMG82_RS11780 (2225397) | 2225397..2226107 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| QMG82_RS11785 (2226215) | 2226215..2226520 | + | 306 | WP_001307224.1 | DUF1161 domain-containing protein | - |
| QMG82_RS11790 (2226719) | 2226719..2229144 | + | 2426 | Protein_2312 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|