MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 174578 bp
Accession: NZ_AP027150 Location: 1..174578 Organism: Methylocystis bryophila strain DSM 21852 Replicon: plasmid pDSM21852-1
Accession: NZ_AP027150 Location: 1..174578 Organism: Methylocystis bryophila strain DSM 21852 Replicon: plasmid pDSM21852-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMG80_RS20970 (DSM21852_42100) | 1743..2156 | + | 414 | WP_085773947.1 | hypothetical protein | - |
| QMG80_RS20975 (DSM21852_42110) | 2256..6734 | + | 4479 | WP_085773946.1 | strawberry notch family protein | - |
| QMG80_RS20980 (DSM21852_42120) | 6751..7770 | + | 1020 | WP_085773945.1 | toprim domain-containing protein | - |
| QMG80_RS20985 (DSM21852_42130) | 7859..8071 | - | 213 | WP_085773944.1 | cold-shock protein | - |
| QMG80_RS20990 (DSM21852_42140) | 8649..9026 | - | 378 | WP_085773943.1 | HU family DNA-binding protein | - |
| QMG80_RS20995 (DSM21852_42150) | 9078..9563 | - | 486 | WP_085773942.1 | MucR family transcriptional regulator | - |
| QMG80_RS21000 (DSM21852_42160) | 9873..10580 | - | 708 | WP_199769103.1 | DUF2161 family putative PD-(D/E)XK-type phosphodiesterase | - |
| QMG80_RS21005 (DSM21852_42170) | 11187..12623 | - | 1437 | WP_085773940.1 | hypothetical protein | - |
| QMG80_RS21010 (DSM21852_42180) | 12885..13940 | - | 1056 | WP_085773939.1 | Fic family protein | - |
| QMG80_RS21015 (DSM21852_42190) | 14646..15596 | + | 951 | WP_102938237.1 | DUF2493 domain-containing protein | - |
| QMG80_RS21020 (DSM21852_42200) | 15786..17009 | + | 1224 | WP_085773938.1 | plasmid partitioning protein RepA | - |
| QMG80_RS21025 (DSM21852_42210) | 17006..17965 | + | 960 | WP_085774007.1 | plasmid partitioning protein RepB | - |
| QMG80_RS21030 (DSM21852_42220) | 18184..19518 | + | 1335 | WP_085773937.1 | plasmid replication protein RepC | - |
| QMG80_RS21035 (DSM21852_42230) | 19790..20026 | + | 237 | WP_085773936.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QMG80_RS21040 (DSM21852_42240) | 20023..20451 | + | 429 | WP_281926536.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QMG80_RS21045 (DSM21852_42250) | 20490..21623 | - | 1134 | WP_085773934.1 | tyrosine-type recombinase/integrase | - |
| QMG80_RS21050 (DSM21852_42260) | 21858..22808 | + | 951 | WP_158658929.1 | DUF1403 family protein | - |
| QMG80_RS21055 (DSM21852_42270) | 22815..23519 | + | 705 | WP_085773932.1 | SMC-Scp complex subunit ScpB | - |
| QMG80_RS21060 (DSM21852_42280) | 23812..24117 | + | 306 | WP_085773931.1 | type II toxin-antitoxin system MqsR family toxin | - |
| QMG80_RS21065 (DSM21852_42290) | 24120..24539 | + | 420 | WP_085773930.1 | type II toxin-antitoxin system MqsA family antitoxin | - |
| QMG80_RS21070 (DSM21852_42300) | 24659..24997 | + | 339 | WP_210190845.1 | hypothetical protein | - |
| QMG80_RS21075 (DSM21852_42310) | 24919..26022 | + | 1104 | WP_158658928.1 | ISKra4 family transposase | - |
| QMG80_RS21080 (DSM21852_42320) | 26313..30023 | - | 3711 | WP_085773926.1 | chemotaxis protein CheB | - |
| QMG80_RS21085 (DSM21852_42340) | 30734..31507 | - | 774 | WP_085773925.1 | SPFH domain-containing protein | - |
| QMG80_RS21090 (DSM21852_42350) | 31901..32263 | + | 363 | WP_085773924.1 | hypothetical protein | - |
| QMG80_RS21095 (DSM21852_42360) | 32558..33076 | + | 519 | Protein_26 | phage integrase N-terminal SAM-like domain-containing protein | - |
| QMG80_RS21100 | 33242..33376 | + | 135 | WP_281926554.1 | hypothetical protein | - |
| QMG80_RS21105 (DSM21852_42370) | 34126..35355 | + | 1230 | WP_085774006.1 | group II intron reverse transcriptase/maturase | - |
| QMG80_RS21110 (DSM21852_42380) | 35420..36511 | - | 1092 | WP_158658927.1 | ISL3 family transposase | - |
| QMG80_RS21115 (DSM21852_42390) | 37222..37926 | + | 705 | WP_085773921.1 | ABC transporter ATP-binding protein | - |
| QMG80_RS21120 (DSM21852_42400) | 37883..39331 | + | 1449 | WP_245300307.1 | DUF3526 domain-containing protein | - |
| QMG80_RS21125 (DSM21852_42410) | 39348..40799 | + | 1452 | WP_085773920.1 | ABC transporter permease subunit | - |
| QMG80_RS21130 (DSM21852_42420) | 41018..41266 | - | 249 | WP_085773919.1 | hypothetical protein | - |
| QMG80_RS21135 (DSM21852_42430) | 41278..41964 | - | 687 | WP_245300306.1 | transposase | - |
| QMG80_RS21140 (DSM21852_42440) | 42244..43029 | - | 786 | WP_085773917.1 | hypothetical protein | - |
| QMG80_RS21145 (DSM21852_42460) | 43525..45006 | - | 1482 | WP_085773915.1 | efflux transporter outer membrane subunit | - |
| QMG80_RS21150 (DSM21852_42470) | 45034..46242 | - | 1209 | WP_085773914.1 | ABC transporter permease | - |
| QMG80_RS21155 (DSM21852_42480) | 46239..46994 | - | 756 | WP_085773913.1 | ABC transporter ATP-binding protein | - |
| QMG80_RS21160 (DSM21852_42490) | 46991..48283 | - | 1293 | WP_158658926.1 | efflux RND transporter periplasmic adaptor subunit | - |
| QMG80_RS21165 (DSM21852_42500) | 48378..48836 | - | 459 | WP_158658925.1 | hypothetical protein | - |
| QMG80_RS21170 (DSM21852_42510) | 48954..50324 | - | 1371 | WP_085773911.1 | PepSY-associated TM helix domain-containing protein | - |
| QMG80_RS21175 (DSM21852_42520) | 50418..55301 | - | 4884 | WP_102938231.1 | TonB-dependent siderophore receptor | - |
| QMG80_RS21180 (DSM21852_42530) | 55619..56305 | + | 687 | WP_085773909.1 | response regulator transcription factor | - |
| QMG80_RS21185 (DSM21852_42540) | 56302..57714 | + | 1413 | WP_085773908.1 | HAMP domain-containing sensor histidine kinase | - |
| QMG80_RS21190 (DSM21852_42550) | 57817..58893 | - | 1077 | WP_102938235.1 | metallophosphoesterase | - |
| QMG80_RS21195 | 59106..59255 | + | 150 | WP_199769106.1 | hypothetical protein | - |
| QMG80_RS21200 (DSM21852_42560) | 59252..59416 | + | 165 | WP_245300305.1 | efflux RND transporter permease subunit | - |
| QMG80_RS21205 (DSM21852_42570) | 59584..60243 | - | 660 | WP_158658924.1 | 4'-phosphopantetheinyl transferase superfamily protein | - |
| QMG80_RS21210 (DSM21852_42580) | 60609..60884 | - | 276 | WP_245300309.1 | hypothetical protein | - |
| QMG80_RS21215 (DSM21852_42590) | 61067..61678 | - | 612 | WP_245300304.1 | IS110 family transposase | - |
| QMG80_RS21220 (DSM21852_42600) | 61715..61855 | - | 141 | WP_245300303.1 | IS110 family transposase | - |
| QMG80_RS21225 (DSM21852_42620) | 62839..64203 | + | 1365 | WP_245300308.1 | diaminobutyrate--2-oxoglutarate transaminase | - |
| QMG80_RS21230 (DSM21852_42630) | 64247..64471 | + | 225 | WP_085773903.1 | MbtH family NRPS accessory protein | - |
| QMG80_RS21235 (DSM21852_42640) | 66075..74771 | + | 8697 | WP_281926549.1 | amino acid adenylation domain-containing protein | - |
| QMG80_RS21240 (DSM21852_42650) | 74798..75859 | + | 1062 | WP_085773901.1 | TauD/TfdA family dioxygenase | - |
| QMG80_RS21245 (DSM21852_42660) | 75856..109644 | + | 33789 | WP_281926551.1 | non-ribosomal peptide synthase/polyketide synthase | - |
| QMG80_RS21250 | 109742..110019 | + | 278 | Protein_57 | integrase core domain-containing protein | - |
| QMG80_RS21255 | 110118..111060 | + | 943 | WP_102938125.1 | IS630 family transposase | - |
| QMG80_RS21260 (DSM21852_42700) | 111142..112041 | - | 900 | WP_085774013.1 | cupin-like domain-containing protein | - |
| QMG80_RS21265 (DSM21852_42710) | 112585..113292 | + | 708 | WP_245300313.1 | alpha/beta fold hydrolase | - |
| QMG80_RS21270 | 113646..114700 | - | 1055 | Protein_61 | IS110 family transposase | - |
| QMG80_RS21275 (DSM21852_42740) | 114949..116106 | + | 1158 | WP_245300312.1 | cytochrome c peroxidase | - |
| QMG80_RS21280 (DSM21852_42750) | 117129..118643 | + | 1515 | WP_085773999.1 | hypothetical protein | - |
| QMG80_RS21285 (DSM21852_42760) | 118982..120661 | + | 1680 | WP_158658941.1 | cyclic peptide export ABC transporter | - |
| QMG80_RS21290 (DSM21852_42770) | 120654..123035 | + | 2382 | WP_085773997.1 | penicillin acylase family protein | - |
| QMG80_RS21295 (DSM21852_42780) | 123125..123640 | + | 516 | WP_158658939.1 | hypothetical protein | - |
| QMG80_RS21300 | 123699..125069 | - | 1371 | WP_085773995.1 | glycosyltransferase | - |
| QMG80_RS21305 (DSM21852_42800) | 125645..126825 | + | 1181 | WP_102938234.1 | IS3 family transposase | - |
| QMG80_RS21310 (DSM21852_42810) | 127195..127686 | - | 492 | WP_158658938.1 | helix-turn-helix domain-containing protein | - |
| QMG80_RS21315 (DSM21852_42820) | 128123..128662 | - | 540 | WP_085773993.1 | hypothetical protein | - |
| QMG80_RS21320 (DSM21852_42840) | 130287..130631 | + | 345 | WP_085773989.1 | single-stranded DNA-binding protein | - |
| QMG80_RS21325 (DSM21852_42850) | 131335..131712 | + | 378 | WP_085773988.1 | single-stranded DNA-binding protein | - |
| QMG80_RS21330 (DSM21852_42860) | 131988..132719 | + | 732 | WP_245300300.1 | SOS response-associated peptidase | - |
| QMG80_RS21335 | 133478..133813 | + | 336 | WP_158658937.1 | hypothetical protein | - |
| QMG80_RS21340 (DSM21852_42880) | 134093..134677 | - | 585 | WP_085773986.1 | Fic family protein | - |
| QMG80_RS21345 (DSM21852_42890) | 134677..134883 | - | 207 | WP_085773985.1 | hypothetical protein | - |
| QMG80_RS21350 (DSM21852_42900) | 134942..135130 | - | 189 | WP_158658936.1 | DUF6290 family protein | - |
| QMG80_RS21355 (DSM21852_42910) | 135231..135515 | + | 285 | WP_158658935.1 | multiubiquitin domain-containing protein | - |
| QMG80_RS21360 (DSM21852_42920) | 135528..135917 | + | 390 | WP_085773983.1 | E2/UBC family protein | - |
| QMG80_RS21365 (DSM21852_42930) | 135914..137302 | + | 1389 | WP_085773982.1 | ThiF family adenylyltransferase | - |
| QMG80_RS21370 | 137299..137634 | + | 336 | WP_085773981.1 | DUF6527 family protein | - |
| QMG80_RS21375 (DSM21852_42940) | 137631..138530 | + | 900 | WP_085773980.1 | hypothetical protein | - |
| QMG80_RS21380 (DSM21852_42950) | 138930..139352 | - | 423 | WP_085773979.1 | hypothetical protein | - |
| QMG80_RS21385 (DSM21852_42960) | 139345..140031 | - | 687 | WP_085773978.1 | P-loop NTPase | - |
| QMG80_RS21390 (DSM21852_42980) | 141054..141458 | + | 405 | WP_085773976.1 | plasmid mobilization relaxosome protein MobC | - |
| QMG80_RS21395 (DSM21852_42990) | 141455..144433 | + | 2979 | WP_085773975.1 | relaxase/mobilization nuclease domain-containing protein | - |
| QMG80_RS21400 (DSM21852_43000) | 144742..145440 | - | 699 | WP_245300298.1 | ImmA/IrrE family metallo-endopeptidase | - |
| QMG80_RS21405 (DSM21852_43020) | 145672..146172 | - | 501 | WP_245300297.1 | helix-turn-helix transcriptional regulator | - |
| QMG80_RS21410 (DSM21852_43030) | 146178..146798 | - | 621 | WP_085773973.1 | GNAT family N-acetyltransferase | - |
| QMG80_RS21415 (DSM21852_43040) | 146795..147007 | - | 213 | WP_085773972.1 | transcriptional regulator | - |
| QMG80_RS21420 (DSM21852_43050) | 147167..148132 | + | 966 | WP_085773971.1 | CBASS oligonucleotide cyclase | - |
| QMG80_RS21425 (DSM21852_43060) | 148142..148657 | + | 516 | WP_085773970.1 | hypothetical protein | - |
| QMG80_RS21430 (DSM21852_43070) | 148657..149604 | + | 948 | WP_085773969.1 | AAA family ATPase | - |
| QMG80_RS21435 (DSM21852_43080) | 149615..151147 | + | 1533 | WP_085773968.1 | SAVED domain-containing protein | - |
| QMG80_RS21440 (DSM21852_43090) | 151357..153747 | - | 2391 | WP_245300311.1 | type IV secretory system conjugative DNA transfer family protein | - |
| QMG80_RS21445 (DSM21852_43100) | 153756..154760 | - | 1005 | WP_085773966.1 | P-type DNA transfer ATPase VirB11 | - |
| QMG80_RS21450 (DSM21852_43110) | 154708..156054 | - | 1347 | WP_085773965.1 | type IV secretion system protein VirB10 | - |
| QMG80_RS21455 (DSM21852_43120) | 156067..156936 | - | 870 | WP_085773964.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| QMG80_RS21460 (DSM21852_43130) | 156933..157682 | - | 750 | WP_085773963.1 | type IV secretion system protein | - |
| QMG80_RS21465 (DSM21852_43140) | 157694..158758 | - | 1065 | WP_158658934.1 | type IV secretion system protein | - |
| QMG80_RS21470 | 158778..158957 | - | 180 | WP_158658933.1 | hypothetical protein | - |
| QMG80_RS21475 (DSM21852_43150) | 158970..159692 | - | 723 | WP_085773961.1 | type IV secretion system protein | - |
| QMG80_RS21480 (DSM21852_43160) | 159758..160408 | - | 651 | WP_085773960.1 | hypothetical protein | - |
| QMG80_RS21485 (DSM21852_43170) | 160398..162833 | - | 2436 | WP_085773959.1 | VirB4 family type IV secretion system protein | - |
| QMG80_RS21490 (DSM21852_43180) | 162844..163140 | - | 297 | WP_085773958.1 | VirB3 family type IV secretion system protein | - |
| QMG80_RS21495 (DSM21852_43190) | 163146..163451 | - | 306 | WP_085773957.1 | TrbC/VirB2 family protein | - |
| QMG80_RS21500 (DSM21852_43200) | 163448..164173 | - | 726 | WP_245300295.1 | lytic transglycosylase domain-containing protein | - |
| QMG80_RS21505 (DSM21852_43210) | 164321..164659 | + | 339 | WP_158658932.1 | hypothetical protein | - |
| QMG80_RS21510 (DSM21852_43220) | 164659..165273 | + | 615 | WP_085773955.1 | hypothetical protein | - |
| QMG80_RS21515 (DSM21852_43240) | 165500..166024 | + | 525 | WP_158658931.1 | hypothetical protein | - |
| QMG80_RS21520 (DSM21852_43250) | 166046..166789 | + | 744 | WP_158658930.1 | hypothetical protein | - |
| QMG80_RS21525 (DSM21852_43260) | 166803..167408 | + | 606 | WP_102938233.1 | succinoglycan biosynthesis protein exoi | - |
| QMG80_RS21530 (DSM21852_43270) | 167421..168320 | + | 900 | WP_085773952.1 | toprim domain-containing protein | - |
| QMG80_RS21535 (DSM21852_43280) | 168548..168937 | - | 390 | WP_085773951.1 | hypothetical protein | - |
| QMG80_RS21540 (DSM21852_43290) | 169636..171549 | + | 1914 | WP_085773950.1 | AAA family ATPase | - |
| QMG80_RS21545 (DSM21852_43300) | 171546..173462 | + | 1917 | WP_085773949.1 | ATP-dependent helicase | - |
| QMG80_RS21550 (DSM21852_43310) | 173707..174078 | + | 372 | WP_085773948.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|