MGE detailed information
MGE type: Prophage MGE length: 55067 bp
Accession: NZ_AP026948 Location: 1975143..2030209 Organism: Salmonella enterica strain SE20-72C-2 Replicon: chromosome
Accession: NZ_AP026948 Location: 1975143..2030209 Organism: Salmonella enterica strain SE20-72C-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO990_RS09560 (SE2072C2_18490) | 1970882..1971334 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| OO990_RS09565 (SE2072C2_18500) | 1971364..1972104 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| OO990_RS09570 (SE2072C2_18510) | 1972141..1972662 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| OO990_RS09575 (SE2072C2_18520) | 1972664..1973263 | - | 600 | WP_000716750.1 | YebB family permuted papain-like enzyme | - |
| OO990_RS09580 | 1973472..1974164 | + | 693 | WP_023230996.1 | hypothetical protein | - |
| OO990_RS09585 (SE2072C2_18540) | 1974523..1975134 | + | 612 | WP_000580333.1 | Holliday junction branch migration protein RuvA | - |
| OO990_RS09590 (SE2072C2_18550) | 1975143..1976153 | + | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| OO990_RS09595 (SE2072C2_18560) | 1976232..1977017 | - | 786 | WP_000571508.1 | hypothetical protein | VF |
| OO990_RS09600 (SE2072C2_18570) | 1977014..1977769 | - | 756 | WP_000203018.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| OO990_RS09605 (SE2072C2_18580) | 1977848..1978792 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| OO990_RS09610 (SE2072C2_18590) | 1978808..1980127 | + | 1320 | WP_001184030.1 | murein DD-endopeptidase MepM | - |
| OO990_RS09615 (SE2072C2_18600) | 1980244..1981215 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| OO990_RS09620 (SE2072C2_18610) | 1981288..1982730 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| OO990_RS09625 (SE2072C2_18620) | 1982854..1983723 | - | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| OO990_RS09630 (SE2072C2_18630) | 1984065..1985540 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| OO990_RS09635 (SE2072C2_18640) | 1985775..1987586 | + | 1812 | WP_001069118.1 | phosphogluconate dehydratase | - |
| OO990_RS09640 (SE2072C2_18650) | 1987624..1988265 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| OO990_RS09645 (SE2072C2_18660) | 1988365..1989543 | - | 1179 | WP_000173436.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| OO990_RS09650 (SE2072C2_18670) | 1989674..1989964 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| OO990_RS09655 (SE2072C2_18680) | 1990032..1990385 | + | 354 | WP_001042123.1 | protein YebF | - |
| OO990_RS09660 (SE2072C2_18690) | 1990479..1991138 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| OO990_RS09665 (SE2072C2_18700) | 1991351..1993402 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| OO990_RS09670 (SE2072C2_18710) | 1993439..1994137 | - | 699 | WP_000944280.1 | exodeoxyribonuclease X | - |
| OO990_RS09675 (SE2072C2_18720) | 1994161..1994817 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| OO990_RS09680 (SE2072C2_18730) | 1994925..1995155 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| OO990_RS09685 (SE2072C2_18740) | 1995293..1995667 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| OO990_RS09690 (SE2072C2_18750) | 1995668..1996543 | + | 876 | WP_000979695.1 | copper homeostasis membrane protein CopD | - |
| OO990_RS09695 (SE2072C2_18760) | 1996560..1996913 | + | 354 | WP_000722363.1 | YebY family protein | - |
| - | 1997016..1997159 | - | 144 | - | - | Antitoxin Detail |
| - | 1997054..1997157 | + | 104 | - | - | Toxin Detail |
| OO990_RS09700 (SE2072C2_18770) | 1997288..1998367 | - | 1080 | WP_000087641.1 | hypothetical protein ; Integrase | Integrase |
| OO990_RS09705 (SE2072C2_18780) | 1998400..1999548 | - | 1149 | Protein_1895 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| OO990_RS09710 (SE2072C2_18790) | 1999540..1999788 | + | 249 | Protein_1896 | glycoside hydrolase family 19 protein | - |
| OO990_RS09715 | 1999785..2000317 | + | 533 | Protein_1897 | DUF2514 domain-containing protein | - |
| OO990_RS09720 (SE2072C2_18810) | 2000574..2000741 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| OO990_RS09725 (SE2072C2_18820) | 2001044..2001535 | + | 492 | WP_000348547.1 | DUF1441 family protein | - |
| OO990_RS09730 | 2001522..2002089 | + | 568 | Protein_1900 | phage terminase large subunit family protein | - |
| OO990_RS09735 (SE2072C2_18850) | 2002130..2003068 | + | 939 | Protein_1901 | tail fiber protein | - |
| OO990_RS09740 | 2003069..2003416 | + | 348 | Protein_1902 | tail assembly chaperone | - |
| OO990_RS09745 (SE2072C2_18860) | 2003513..2003713 | - | 201 | WP_031615635.1 | PagK family vesicle-borne virulence factor | - |
| OO990_RS09750 | 2004103..2004283 | - | 181 | Protein_1904 | IS3 family transposase | - |
| OO990_RS09755 | 2004274..2004375 | + | 102 | Protein_1905 | arsenic transporter | - |
| OO990_RS09760 | 2004997..2005229 | + | 233 | Protein_1906 | helix-turn-helix domain-containing protein | - |
| OO990_RS09765 | 2005556..2006170 | - | 615 | WP_000848064.1 | disulfide bond formation protein B | - |
| OO990_RS09770 (SE2072C2_18880) | 2006180..2006338 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| OO990_RS09775 | 2006471..2007385 | - | 915 | WP_046380654.1 | DMT family transporter | - |
| OO990_RS09780 (SE2072C2_18890) | 2008176..2008739 | - | 564 | Protein_1910 | fimbrial protein | - |
| OO990_RS09785 (SE2072C2_18900) | 2008891..2009243 | + | 353 | Protein_1911 | IS256 family transposase ISEc39 | Transposase |
| OO990_RS09790 | 2009389..2009529 | - | 141 | WP_001604859.1 | hypothetical protein | - |
| OO990_RS09795 | 2009695..2009964 | - | 270 | WP_077906414.1 | hypothetical protein | - |
| OO990_RS09800 (SE2072C2_18920) | 2010004..2010204 | + | 201 | WP_000007801.1 | hypothetical protein | - |
| OO990_RS09805 (SE2072C2_18930) | 2010333..2010752 | + | 420 | WP_000354406.1 | GNAT family N-acetyltransferase | - |
| OO990_RS09810 (SE2072C2_18940) | 2011140..2011616 | - | 477 | WP_000102094.1 | hypothetical protein | - |
| OO990_RS09815 (SE2072C2_18950) | 2011944..2012339 | - | 396 | WP_000422883.1 | DUF1398 domain-containing protein | - |
| OO990_RS09820 (SE2072C2_18960) | 2013023..2013745 | + | 723 | WP_000182069.1 | hypothetical protein | VF |
| OO990_RS09825 (SE2072C2_18970) | 2014030..2014194 | + | 165 | WP_001134850.1 | hypothetical protein | - |
| OO990_RS09830 (SE2072C2_18980) | 2014419..2015069 | + | 651 | WP_000986166.1 | protein-serine/threonine phosphatase | - |
| OO990_RS09835 (SE2072C2_18990) | 2015088..2015279 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| OO990_RS09840 (SE2072C2_19000) | 2015390..2015626 | - | 237 | WP_024131167.1 | YebV family protein | - |
| OO990_RS09845 (SE2072C2_19010) | 2015743..2017182 | - | 1440 | WP_001530936.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| OO990_RS09850 (SE2072C2_19020) | 2017260..2019893 | - | 2634 | WP_001530909.1 | hypothetical protein | VF |
| OO990_RS09855 (SE2072C2_19030) | 2019862..2021145 | - | 1284 | WP_001207293.1 | membrane integrity lipid transport subunit YebS | - |
| OO990_RS09860 (SE2072C2_19040) | 2021274..2021771 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| OO990_RS09865 (SE2072C2_19050) | 2021869..2022555 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| OO990_RS09870 (SE2072C2_19060) | 2022575..2024623 | + | 2049 | WP_001091241.1 | carboxy terminal-processing peptidase | - |
| OO990_RS09875 (SE2072C2_19070) | 2024816..2025697 | + | 882 | WP_000984498.1 | protease HtpX | - |
| OO990_RS09880 (SE2072C2_19080) | 2025745..2027118 | - | 1374 | WP_000416144.1 | MFS transporter | - |
| OO990_RS09885 (SE2072C2_19100) | 2027294..2028085 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| OO990_RS09890 (SE2072C2_19110) | 2028297..2028536 | - | 240 | WP_001236778.1 | invasion protein YobH | - |
| OO990_RS09895 (SE2072C2_19120) | 2028694..2028837 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| OO990_RS09900 (SE2072C2_19130) | 2028908..2029195 | + | 288 | WP_001000660.1 | YebO family protein | - |
| OO990_RS09905 | 2029844..2029987 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| OO990_RS09910 (SE2072C2_19140) | 2030000..2030209 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| OO990_RS09915 (SE2072C2_19150) | 2030429..2032174 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| OO990_RS09920 (SE2072C2_19160) | 2032240..2033049 | + | 810 | WP_000010916.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| OO990_RS09925 (SE2072C2_19170) | 2033046..2033612 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| OO990_RS09930 (SE2072C2_19180) | 2034022..2034480 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|