MGE detailed information
MGE type: Genomic_island MGE length: 26654 bp
Accession: NZ_AP026937 Location: 1876725..1903378 Organism: Escherichia coli strain EC20-4B-2 Replicon: chromosome
Accession: NZ_AP026937 Location: 1876725..1903378 Organism: Escherichia coli strain EC20-4B-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO845_RS09225 (1872305) | 1872305..1872757 | - | 453 | WP_001059855.1 | GNAT family N-acetyltransferase | - |
| OO845_RS09230 (1872754) | 1872754..1873809 | - | 1056 | WP_001226183.1 | DNA polymerase IV | - |
| OO845_RS09235 (1873880) | 1873880..1874665 | - | 786 | WP_264832224.1 | putative lateral flagellar export/assembly protein LafU | - |
| OO845_RS09240 (1874637) | 1874637..1876349 | + | 1713 | Protein_1811 | flagellar biosynthesis protein FlhA | - |
| OO845_RS09245 (1876454) | 1876454..1876732 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| OO845_RS09250 (1876725) | 1876725..1877081 | + | 357 | WP_001030483.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| OO845_RS09255 (1877138) | 1877138..1877911 | - | 774 | WP_000543895.1 | Murein DD-endopeptidase MepH | VF |
| OO845_RS09260 (1878097) | 1878097..1878357 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| OO845_RS09265 (1878360) | 1878360..1878638 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| OO845_RS09270 (1878794) | 1878794..1879534 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| OO845_RS09275 (1879505) | 1879505..1880272 | - | 768 | WP_180397265.1 | class II glutamine amidotransferase | - |
| OO845_RS09280 (1880478) | 1880478..1881056 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| OO845_RS09285 (1881296) | 1881296..1883740 | + | 2445 | WP_089621614.1 | Acyl-coenzyme A dehydrogenase | VF |
| OO845_RS09290 (1883783) | 1883783..1884229 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| OO845_RS09295 (1884410) | 1884410..1885180 | + | 771 | WP_001118038.1 | 2-oxoglutaramate amidase | - |
| OO845_RS09300 (1885222) | 1885222..1886358 | - | 1137 | Protein_1823 | ISAs1 family transposase ISEc1 | Transposase |
| OO845_RS09305 (1886461) | 1886461..1887587 | - | 1127 | Protein_1824 | ISAs1 family transposase ISEc26 | Transposase |
| OO845_RS09310 (1887668) | 1887668..1887853 | + | 186 | WP_122985282.1 | hypothetical protein | - |
| OO845_RS09315 (1887768) | 1887768..1888031 | - | 264 | WP_001513053.1 | hypothetical protein | - |
| OO845_RS09320 (1888234) | 1888234..1891885 | - | 3652 | Protein_1827 | Protein RhsD | VF |
| OO845_RS09325 (1891961) | 1891961..1893574 | - | 1614 | WP_264832225.1 | Actin cross-linking toxin VgrG1 | VF |
| OO845_RS09330 (1893784) | 1893784..1893966 | - | 183 | Protein_1829 | type VI secretion system tube protein Hcp | - |
| OO845_RS09335 (1893966) | 1893966..1895829 | + | 1864 | Protein_1830 | hypothetical protein | VF |
| OO845_RS09340 (1895840) | 1895840..1897289 | + | 1450 | Protein_1831 | type VI secretion system ImpA family N-terminal domain-containing protein | - |
| OO845_RS09345 (1897216) | 1897216..1897698 | + | 483 | WP_001284199.1 | Major exported protein | VF |
| OO845_RS09350 (1897742) | 1897742..1898656 | + | 915 | WP_000908058.1 | hypothetical protein | - |
| OO845_RS09355 (1898666) | 1898666..1899145 | + | 480 | WP_001236649.1 | protein YkfM | - |
| OO845_RS09360 (1899282) | 1899282..1900067 | - | 786 | WP_001086142.1 | aminopeptidase | - |
| OO845_RS09370 (1900607) | 1900607..1901338 | - | 732 | WP_001297205.1 | DNA polymerase III subunit epsilon | - |
| OO845_RS09375 (1901403) | 1901403..1901870 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| OO845_RS09380 (1901867) | 1901867..1902589 | - | 723 | WP_001297210.1 | class I SAM-dependent methyltransferase | - |
| OO845_RS09385 (1902623) | 1902623..1903378 | + | 756 | WP_001052720.1 | hydroxyacylglutathione hydrolase | - |
| OO845_RS09390 (1903450) | 1903450..1904808 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| OO845_RS09395 (1904856) | 1904856..1905626 | - | 771 | WP_000211690.1 | class I SAM-dependent methyltransferase | - |
| OO845_RS09400 (1905704) | 1905704..1906504 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| OO845_RS09405 (1906745) | 1906745..1907659 | + | 915 | WP_000648606.1 | DNA-binding transcriptional regulator YafC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|