MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 30638 bp
Accession: NZ_AP026797 Location: 1..30638 Organism: Escherichia coli strain IPCEC48 Replicon: plasmid pIPCEC48_3
Accession: NZ_AP026797 Location: 1..30638 Organism: Escherichia coli strain IPCEC48 Replicon: plasmid pIPCEC48_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OPA53_RS26770 (IPCEC48_51410) | 7..873 | + | 867 | WP_053911940.1 | replication initiation protein | - |
| OPA53_RS26775 (IPCEC48_51420) | 886..1290 | + | 405 | WP_000654311.1 | hypothetical protein | - |
| OPA53_RS26780 (IPCEC48_51430) | 1425..1952 | + | 528 | WP_000577044.1 | DUF2726 domain-containing protein | - |
| OPA53_RS26785 (IPCEC48_51450) | 2247..2462 | - | 216 | WP_000806548.1 | hypothetical protein | - |
| OPA53_RS26790 (IPCEC48_51460) | 2487..2756 | - | 270 | WP_001086090.1 | hypothetical protein | - |
| OPA53_RS26795 (IPCEC48_51470) | 2831..3478 | - | 648 | WP_000587671.1 | division plane positioning ATPase MipZ | - |
| OPA53_RS26800 (IPCEC48_51480) | 4099..4563 | - | 465 | WP_001293143.1 | H-NS family nucleoid-associated regulatory protein | - |
| OPA53_RS26805 (IPCEC48_51490) | 4579..4785 | - | 207 | WP_000850857.1 | hemolysin expression modulator Hha | - |
| OPA53_RS26810 (IPCEC48_51500) | 4782..6935 | - | 2154 | WP_053911937.1 | type IA DNA topoisomerase | - |
| OPA53_RS26815 (IPCEC48_51510) | 6940..7515 | - | 576 | WP_001198961.1 | hypothetical protein | - |
| OPA53_RS26820 (IPCEC48_51520) | 7526..7855 | - | 330 | WP_001330833.1 | hypothetical protein | - |
| OPA53_RS26825 (IPCEC48_51530) | 7876..8628 | - | 753 | WP_000988355.1 | hypothetical protein | - |
| OPA53_RS26830 (IPCEC48_51550) | 8907..9419 | - | 513 | WP_001221548.1 | thermonuclease family protein | - |
| OPA53_RS26835 (IPCEC48_51560) | 9416..9850 | - | 435 | WP_077251204.1 | hypothetical protein | - |
| OPA53_RS26840 (IPCEC48_51570) | 9922..10173 | - | 252 | WP_000005456.1 | hypothetical protein | - |
| OPA53_RS26845 (IPCEC48_51580) | 10228..10533 | - | 306 | WP_032282386.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| OPA53_RS26850 (IPCEC48_51590) | 10517..10939 | - | 423 | WP_001330758.1 | cag pathogenicity island Cag12 family protein | - |
| OPA53_RS26855 (IPCEC48_51600) | 10948..12810 | - | 1863 | WP_172440217.1 | relaxosome-coupling protein TaxB | - |
| OPA53_RS26860 (IPCEC48_51610) | 12797..13825 | - | 1029 | WP_001014667.1 | Type IV secretion system protein VirB11 | VF |
| OPA53_RS26865 (IPCEC48_51620) | 13827..14945 | - | 1119 | WP_000131269.1 | Type IV secretion system protein virB10 | VF |
| OPA53_RS26870 (IPCEC48_51630) | 14938..15846 | - | 909 | WP_001329500.1 | Type IV secretion system protein virB9 | VF |
| OPA53_RS26875 (IPCEC48_51640) | 15843..16529 | - | 687 | WP_021548634.1 | Type IV secretion system protein virB8 | VF |
| OPA53_RS26880 (IPCEC48_51660) | 17026..18105 | - | 1080 | WP_000007791.1 | hypothetical protein | VF |
| OPA53_RS26885 (IPCEC48_51670) | 18116..18832 | - | 717 | WP_000832282.1 | type IV secretion system protein | - |
| OPA53_RS26890 (IPCEC48_51680) | 18844..21591 | - | 2748 | WP_021548632.1 | Type IV secretion system protein virB4 | VF |
| OPA53_RS26895 (IPCEC48_51690) | 21610..21936 | - | 327 | WP_000008647.1 | Type IV secretion system protein virB2 | VF |
| OPA53_RS26900 (IPCEC48_51700) | 21950..22570 | - | 621 | WP_053911938.1 | Type IV secretion system protein virB1 | VF |
| OPA53_RS26905 (IPCEC48_51720) | 22926..23159 | - | 234 | WP_000121161.1 | EexN family lipoprotein | - |
| OPA53_RS26910 (IPCEC48_51730) | 23164..23430 | - | 267 | WP_000160395.1 | hypothetical protein | - |
| OPA53_RS26915 (IPCEC48_51740) | 23507..24736 | - | 1230 | WP_001694183.1 | hypothetical protein | Relaxase |
| OPA53_RS26920 (IPCEC48_51750) | 24748..25248 | - | 501 | WP_001694182.1 | DNA distortion polypeptide 1 | - |
| OPA53_RS26925 (IPCEC48_51760) | 25612..25959 | - | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| OPA53_RS26930 (IPCEC48_51770) | 25956..26204 | - | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| OPA53_RS26935 (IPCEC48_51790) | 26511..26816 | - | 306 | WP_072182957.1 | hypothetical protein | - |
| OPA53_RS26940 (IPCEC48_51800) | 26884..27156 | - | 273 | WP_001272373.1 | hypothetical protein | - |
| OPA53_RS26945 | 27283..27603 | - | 321 | WP_224693477.1 | molecular chaperone DnaJ | - |
| OPA53_RS26950 (IPCEC48_51810) | 27605..27832 | - | 228 | WP_000801440.1 | hypothetical protein | - |
| OPA53_RS26955 (IPCEC48_51820) | 27819..28070 | - | 252 | WP_001230707.1 | hypothetical protein | - |
| OPA53_RS26960 (IPCEC48_51830) | 28067..28609 | - | 543 | WP_001083906.1 | hypothetical protein | - |
| OPA53_RS26965 (IPCEC48_51840) | 28714..29229 | - | 516 | WP_001025395.1 | J domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|