MGE detailed information
MGE type: Genomic_island MGE length: 35748 bp
Accession: NZ_AP026783 Location: 4287095..4322842 Organism: Escherichia coli strain IPCEC31 Replicon: chromosome
Accession: NZ_AP026783 Location: 4287095..4322842 Organism: Escherichia coli strain IPCEC31 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO978_RS20910 (4282778) | 4282778..4283260 | - | 483 | WP_113519386.1 | Dr family adhesin structural subunit | - |
| OO978_RS20915 (4283462) | 4283462..4283635 | - | 174 | WP_031326652.1 | protein DraP | - |
| OO978_RS20920 (4284014) | 4284014..4284457 | - | 444 | WP_001014486.1 | Dr fimbrial tip invasin DraD | - |
| OO978_RS20925 (4284473) | 4284473..4287055 | - | 2583 | WP_001522324.1 | AfaC-I/III family usher protein | - |
| OO978_RS20930 (4287095) | 4287095..4287892 | - | 798 | WP_001522323.1 | Chaperone protein caf1M | VF |
| OO978_RS20935 (4288118) | 4288118..4288423 | - | 306 | WP_001545784.1 | Major pilu subunit operon regulatory protein PapB | VF |
| OO978_RS20940 (4289226) | 4289226..4289483 | + | 258 | WP_023910665.1 | Dr hemagglutinin AFA-III operon transcriptional regulator AfaF | - |
| OO978_RS20945 (4289922) | 4289922..4290164 | - | 243 | WP_001522318.1 | hypothetical protein | - |
| OO978_RS20950 (4290518) | 4290518..4291702 | + | 1185 | Protein_4101 | IS66 family transposase ISCro1 | Transposase |
| OO978_RS20955 (4292057) | 4292057..4292503 | - | 447 | Protein_4102 | ParB N-terminal domain-containing protein | - |
| OO978_RS20960 (4292562) | 4292562..4293359 | - | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| OO978_RS20965 (4293359) | 4293359..4294531 | - | 1173 | WP_000952373.1 | IS21 family transposase IS21 | Transposase |
| OO978_RS20970 (4294633) | 4294633..4294830 | - | 198 | Protein_4105 | transcriptional regulator | - |
| OO978_RS20975 (4294815) | 4294815..4296044 | - | 1230 | WP_031326665.1 | phosphoadenosine phosphosulfate reductase | - |
| OO978_RS20980 (4296320) | 4296320..4296709 | - | 390 | WP_001522311.1 | cytochrome b562 | - |
| OO978_RS20985 (4296744) | 4296744..4297359 | - | 616 | Protein_4108 | catalase-peroxidase | - |
| OO978_RS20990 (4297896) | 4297896..4298390 | + | 495 | WP_001522307.1 | Transcriptional repressor MprA | VF |
| OO978_RS20995 (4298659) | 4298659..4302264 | - | 3606 | WP_001522306.1 | AAA domain-containing protein | - |
| OO978_RS21000 (4302472) | 4302472..4303098 | - | 627 | WP_001522305.1 | hypothetical protein | - |
| OO978_RS21005 (4303242) | 4303242..4303414 | - | 173 | Protein_4112 | Rpn family recombination-promoting nuclease/putative transposase | - |
| OO978_RS21010 (4303502) | 4303502..4303825 | - | 324 | WP_154673587.1 | hypothetical protein | - |
| OO978_RS21015 (4303961) | 4303961..4304437 | + | 477 | WP_001522303.1 | ProQ/FinO family protein | - |
| OO978_RS21020 (4304516) | 4304516..4304704 | + | 189 | WP_249438170.1 | hypothetical protein | - |
| OO978_RS21025 (4304841) | 4304841..4305827 | + | 987 | Protein_4116 | autotransporter adhesin family protein | - |
| OO978_RS21030 (4306144) | 4306144..4306632 | + | 489 | Protein_4117 | DUF945 domain-containing protein | - |
| OO978_RS21035 (4306627) | 4306627..4306722 | + | 96 | Protein_4118 | hypothetical protein | - |
| OO978_RS21040 (4306903) | 4306903..4308402 | + | 1500 | WP_059332257.1 | IS21 family transposase ISEc10 | Transposase |
| OO978_RS21045 (4308399) | 4308399..4309154 | + | 756 | WP_001522280.1 | IS21 family transposase ISEc10 | Transposase |
| OO978_RS21050 (4309206) | 4309206..4309427 | + | 222 | WP_023909484.1 | DUF987 domain-containing protein | - |
| OO978_RS21055 (4309507) | 4309507..4309881 | + | 375 | WP_023909483.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| OO978_RS21060 (4309928) | 4309928..4310302 | + | 375 | WP_023909482.1 | TA system toxin CbtA family protein | Toxin Detail |
| OO978_RS21065 (4310299) | 4310299..4310790 | + | 492 | WP_023909481.1 | DUF5983 family protein | - |
| OO978_RS21070 (4310802) | 4310802..4310999 | + | 198 | WP_001522268.1 | DUF957 domain-containing protein | - |
| OO978_RS21075 (4311084) | 4311084..4311950 | + | 867 | WP_023909479.1 | DUF4942 domain-containing protein | - |
| OO978_RS21080 (4312022) | 4312022..4312285 | + | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| OO978_RS21085 (4312282) | 4312282..4312608 | + | 327 | WP_001522265.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| OO978_RS21090 (4313491) | 4313491..4315029 | + | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| OO978_RS21095 (4315395) | 4315395..4316729 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| OO978_RS21100 (4316809) | 4316809..4318956 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| OO978_RS21105 (4319015) | 4319015..4320472 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| OO978_RS21110 (4320709) | 4320709..4322226 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| OO978_RS21115 (4322345) | 4322345..4322518 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| OO978_RS21120 (4322546) | 4322546..4322842 | - | 297 | WP_001425728.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| OO978_RS21125 (4323069) | 4323069..4323341 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| OO978_RS21130 (4323353) | 4323353..4323583 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| OO978_RS21135 (4323764) | 4323764..4325395 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| OO978_RS21140 (4325392) | 4325392..4326111 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|