MGE detailed information
MGE type: Genomic_island MGE length: 18721 bp
Accession: NZ_AP026118 Location: 5350778..5369498 Organism: Escherichia coli strain CEC13004 Replicon: chromosome
Accession: NZ_AP026118 Location: 5350778..5369498 Organism: Escherichia coli strain CEC13004 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO879_RS26550 (5345935) | 5345935..5347113 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| OO879_RS26555 (5347181) | 5347181..5348023 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| OO879_RS26560 (5348289) | 5348289..5350466 | - | 2178 | WP_000535057.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| OO879_RS26565 (5350778) | 5350778..5351044 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| OO879_RS26570 (5351041) | 5351041..5351808 | - | 768 | WP_264832311.1 | putative 2-hydroxyacyl-CoA dehydratase activator YjiL | - |
| OO879_RS26575 (5351818) | 5351818..5352969 | - | 1152 | WP_001301805.1 | double-cubane-cluster-containing anaerobic reductase | - |
| OO879_RS26580 (5353085) | 5353085..5354356 | - | 1272 | WP_001037407.1 | DUF445 domain-containing protein | - |
| OO879_RS26585 (5354397) | 5354397..5355629 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| OO879_RS26590 (5356096) | 5356096..5356878 | + | 783 | WP_001303778.1 | Recombination-promoting nuclease RpnD | VF |
| OO879_RS27490 (5356853) | 5356853..5357053 | + | 201 | WP_001310455.1 | hypothetical protein | - |
| OO879_RS26595 (5357296) | 5357296..5358708 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| OO879_RS26600 (5358885) | 5358885..5359049 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| OO879_RS26605 (5359146) | 5359146..5360027 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| OO879_RS26610 (5360075) | 5360075..5361238 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| OO879_RS26615 (5361285) | 5361285..5361626 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - (5361621) | 5361621..5361697 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5361621) | 5361621..5361697 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5361621) | 5361621..5361697 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5361621) | 5361621..5361697 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5361621) | 5361621..5361697 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5361621) | 5361621..5361697 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5361621) | 5361621..5361697 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5361621) | 5361621..5361697 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| OO879_RS26620 (5361847) | 5361847..5363601 | - | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| OO879_RS26625 (5363601) | 5363601..5365070 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| OO879_RS26630 (5365137) | 5365137..5367569 | - | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| OO879_RS26635 (5367847) | 5367847..5368131 | + | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| OO879_RS26640 (5368140) | 5368140..5369498 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| OO879_RS26645 (5369567) | 5369567..5370523 | - | 957 | WP_001297640.1 | GTPase | - |
| OO879_RS26650 (5370534) | 5370534..5370737 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| OO879_RS26655 (5370787) | 5370787..5372937 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| OO879_RS26660 (5373230) | 5373230..5373772 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |