MGE detailed information
MGE type: Genomic_island MGE length: 18721 bp
Accession: NZ_AP026116 Location: 5313770..5332490 Organism: Escherichia coli strain CEC13002 Replicon: chromosome
Accession: NZ_AP026116 Location: 5313770..5332490 Organism: Escherichia coli strain CEC13002 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO850_RS26365 (5308915) | 5308915..5310093 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| OO850_RS26370 (5310161) | 5310161..5311003 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| OO850_RS26375 (5311269) | 5311269..5313458 | - | 2190 | WP_000535067.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| OO850_RS26380 (5313770) | 5313770..5314036 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| OO850_RS26385 (5314033) | 5314033..5314800 | - | 768 | WP_000222489.1 | putative 2-hydroxyacyl-CoA dehydratase activator YjiL | - |
| OO850_RS26390 (5314810) | 5314810..5315961 | - | 1152 | WP_001301805.1 | double-cubane-cluster-containing anaerobic reductase | - |
| OO850_RS26395 (5316077) | 5316077..5317348 | - | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| OO850_RS26400 (5317389) | 5317389..5318621 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| OO850_RS26405 (5319088) | 5319088..5319870 | + | 783 | WP_001303778.1 | Recombination-promoting nuclease RpnD | VF |
| OO850_RS27305 (5319845) | 5319845..5320045 | + | 201 | WP_001310455.1 | hypothetical protein | - |
| OO850_RS26410 (5320288) | 5320288..5321700 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| OO850_RS26415 (5321877) | 5321877..5322041 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| OO850_RS26420 (5322138) | 5322138..5323019 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| OO850_RS26425 (5323067) | 5323067..5324230 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| OO850_RS26430 (5324277) | 5324277..5324618 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - (5324613) | 5324613..5324689 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5324613) | 5324613..5324689 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5324613) | 5324613..5324689 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5324613) | 5324613..5324689 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5324613) | 5324613..5324689 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5324613) | 5324613..5324689 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5324613) | 5324613..5324689 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5324613) | 5324613..5324689 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| OO850_RS26435 (5324839) | 5324839..5326593 | - | 1755 | WP_264831542.1 | restriction endonuclease subunit S | - |
| OO850_RS26440 (5326593) | 5326593..5328062 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| OO850_RS26445 (5328129) | 5328129..5330561 | - | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| OO850_RS26450 (5330839) | 5330839..5331123 | + | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| OO850_RS26455 (5331132) | 5331132..5332490 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| OO850_RS26460 (5332559) | 5332559..5333515 | - | 957 | WP_001297640.1 | GTPase | - |
| OO850_RS26465 (5333526) | 5333526..5333729 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| OO850_RS26470 (5333779) | 5333779..5335929 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| OO850_RS26475 (5336222) | 5336222..5336764 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |