MGE detailed information
MGE type: Genomic_island MGE length: 10041 bp
Accession: NZ_AP026116 Location: 3921972..3932012 Organism: Escherichia coli strain CEC13002 Replicon: chromosome
Accession: NZ_AP026116 Location: 3921972..3932012 Organism: Escherichia coli strain CEC13002 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO850_RS19720 (3917170) | 3917170..3918378 | - | 1209 | WP_001301837.1 | propionate kinase | - |
| OO850_RS19725 (3918404) | 3918404..3919735 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| OO850_RS19730 (3919757) | 3919757..3920746 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| OO850_RS19735 (3920845) | 3920845..3921783 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| OO850_RS19740 (3922098) | 3922098..3922316 | + | 219 | WP_000033206.1 | transcriptional activator TdcR | - |
| OO850_RS19745 (3922572) | 3922572..3923111 | + | 540 | WP_000675739.1 | protein YhaB | - |
| OO850_RS19750 (3923133) | 3923133..3924320 | + | 1188 | WP_000484640.1 | YhaC family protein | - |
| OO850_RS19760 (3924836) | 3924836..3925981 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| OO850_RS19765 (3926078) | 3926078..3926968 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| OO850_RS19770 (3926998) | 3926998..3927768 | - | 771 | WP_001058231.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| OO850_RS19775 (3927784) | 3927784..3929118 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| OO850_RS19780 (3929493) | 3929493..3931064 | + | 1572 | WP_001273776.1 | galactarate dehydratase | - |
| OO850_RS19785 (3931213) | 3931213..3931548 | + | 336 | WP_001302819.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| OO850_RS19790 (3931548) | 3931548..3932012 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| OO850_RS19795 (3932067) | 3932067..3932876 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| OO850_RS19800 (3933125) | 3933125..3934405 | + | 1281 | WP_000681927.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| OO850_RS19805 (3934428) | 3934428..3934901 | + | 474 | WP_001301475.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| OO850_RS19810 (3934912) | 3934912..3935691 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| OO850_RS19815 (3935681) | 3935681..3936559 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| OO850_RS19820 (3936577) | 3936577..3937011 | + | 435 | WP_000948831.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0 |