MGE detailed information
MGE type: Prophage MGE length: 48234 bp
Accession: NZ_AP026116 Location: 2001474..2049707 Organism: Escherichia coli strain CEC13002 Replicon: chromosome
Accession: NZ_AP026116 Location: 2001474..2049707 Organism: Escherichia coli strain CEC13002 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO850_RS09680 (1997988) | 1997988..1998734 | + | 747 | WP_000636568.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| OO850_RS09685 (1998823) | 1998823..1999509 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| OO850_RS09690 (1999686) | 1999686..1999889 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| OO850_RS09695 (1999925) | 1999925..2001385 | - | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| OO850_RS09700 (2001474) | 2001474..2002757 | - | 1284 | Protein_1904 | MHS family MFS transporter YdfJ | - |
| OO850_RS09705 (2002889) | 2002889..2003131 | + | 243 | WP_001120551.1 | DinI-like family protein | - |
| OO850_RS09710 (2003293) | 2003293..2003934 | - | 642 | WP_001143804.1 | hypothetical protein | VF |
| OO850_RS09715 (2004016) | 2004016..2004645 | - | 630 | WP_001356599.1 | hypothetical protein | VF |
| OO850_RS09720 (2004718) | 2004718..2005293 | - | 576 | WP_001131658.1 | hypothetical protein | VF |
| OO850_RS09725 (2005407) | 2005407..2005676 | - | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| OO850_RS09730 (2005678) | 2005678..2006991 | - | 1314 | WP_000268849.1 | ISNCY family transposase KIS | Transposase |
| OO850_RS09735 (2007056) | 2007056..2007655 | - | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| OO850_RS09740 (2007723) | 2007723..2010075 | - | 2353 | Protein_1912 | phage tail protein | - |
| OO850_RS09745 (2010291) | 2010291..2011801 | - | 1511 | Protein_1913 | host specificity protein J | - |
| OO850_RS09750 (2012144) | 2012144..2012725 | - | 582 | WP_001089999.1 | tail assembly protein | - |
| OO850_RS09755 (2012722) | 2012722..2013465 | - | 744 | WP_000194720.1 | C40 family peptidase | - |
| OO850_RS09760 (2013476) | 2013476..2014174 | - | 699 | WP_001179510.1 | phage minor tail protein L | - |
| OO850_RS09765 (2014174) | 2014174..2014515 | - | 342 | WP_000807954.1 | phage tail protein | - |
| OO850_RS09770 (2014508) | 2014508..2017750 | - | 3243 | WP_000212925.1 | phage tail tape measure protein | - |
| OO850_RS09775 (2017802) | 2017802..2018011 | - | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| OO850_RS09780 (2018107) | 2018107..2018481 | - | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| OO850_RS09785 (2018487) | 2018487..2019203 | - | 717 | WP_001275508.1 | major tail subunit | - |
| OO850_RS09790 (2019262) | 2019262..2019606 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| OO850_RS09795 (2019603) | 2019603..2020049 | - | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| OO850_RS09800 (2020046) | 2020046..2020396 | - | 351 | WP_001007901.1 | phage head closure protein | - |
| OO850_RS09805 (2020406) | 2020406..2020732 | - | 327 | WP_000125988.1 | head-tail connector protein | - |
| OO850_RS09810 (2020729) | 2020729..2022827 | - | 2099 | Protein_1926 | phage portal protein | - |
| OO850_RS09815 (2022773) | 2022773..2022994 | - | 222 | WP_001063023.1 | hypothetical protein | - |
| OO850_RS09820 (2023039) | 2023039..2024976 | - | 1938 | WP_000173065.1 | phage major capsid protein | - |
| OO850_RS09825 (2025040) | 2025040..2026701 | - | 1662 | WP_001303179.1 | terminase large subunit | - |
| OO850_RS09830 (2026698) | 2026698..2027261 | - | 564 | WP_000958392.1 | terminase small subunit | - |
| OO850_RS09835 (2027551) | 2027551..2027916 | - | 366 | WP_000279786.1 | HNH endonuclease | - |
| OO850_RS09840 (2027958) | 2027958..2028185 | + | 228 | WP_000095736.1 | YlcI/YnfO family protein | - |
| OO850_RS09845 (2028548) | 2028548..2029015 | - | 468 | WP_264831569.1 | lysis protein | - |
| OO850_RS09850 (2029023) | 2029023..2029169 | - | 147 | WP_000539792.1 | hypothetical protein | - |
| OO850_RS09855 (2029169) | 2029169..2029738 | - | 570 | WP_001056806.1 | phage antirepressor N-terminal domain-containing protein | - |
| OO850_RS09860 (2030009) | 2030009..2030542 | - | 534 | WP_000992137.1 | lysozyme | - |
| OO850_RS09865 (2030593) | 2030593..2030937 | - | 345 | WP_000731259.1 | YdfR family protein | - |
| OO850_RS09870 (2030942) | 2030942..2031157 | - | 216 | WP_024180155.1 | class II holin family protein | - |
| OO850_RS09875 (2031596) | 2031596..2033446 | - | 1851 | WP_064234946.1 | SASA family carbohydrate esterase | - |
| OO850_RS09880 (2033423) | 2033423..2033566 | + | 144 | Protein_1940 | hypothetical protein | - |
| OO850_RS09885 (2033761) | 2033761..2033928 | - | 168 | WP_000216653.1 | DUF3927 family protein | - |
| OO850_RS09890 (2033925) | 2033925..2034353 | - | 429 | WP_001303509.1 | tellurite resistance protein | - |
| OO850_RS09910 (2034990) | 2034990..2035679 | - | 690 | WP_001059381.1 | bacteriophage antitermination protein Q | - |
| OO850_RS09915 (2035676) | 2035676..2036035 | - | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| OO850_RS09920 (2036048) | 2036048..2037097 | - | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| OO850_RS09925 (2037099) | 2037099..2037377 | - | 279 | WP_012779366.1 | hypothetical protein | - |
| OO850_RS09930 (2037545) | 2037545..2037700 | - | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| OO850_RS09935 (2037946) | 2037946..2038050 | - | 105 | WP_001278450.1 | hypothetical protein | - |
| OO850_RS09940 (2038166) | 2038166..2038750 | - | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| OO850_RS09945 (2038807) | 2038807..2039202 | - | 396 | WP_001118159.1 | DUF977 family protein | - |
| OO850_RS09950 (2039218) | 2039218..2039987 | - | 770 | Protein_1951 | DUF1627 domain-containing protein | - |
| OO850_RS09955 (2040013) | 2040013..2040753 | - | 741 | WP_000788938.1 | ATP-binding protein | - |
| OO850_RS09960 (2040760) | 2040760..2041722 | - | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| OO850_RS09965 (2041745) | 2041745..2042170 | - | 426 | WP_000693944.1 | toxin YdaT family protein | - |
| OO850_RS09970 (2042167) | 2042167..2042469 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| OO850_RS09975 (2042567) | 2042567..2042938 | + | 372 | WP_001169686.1 | hypothetical protein | - |
| OO850_RS09980 (2042959) | 2042959..2043150 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| OO850_RS09985 (2043152) | 2043152..2043430 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OO850_RS09990 (2043782) | 2043782..2044081 | + | 300 | WP_001240334.1 | hypothetical protein | - |
| OO850_RS09995 (2044193) | 2044193..2045406 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| OO850_RS10000 (2045466) | 2045466..2045684 | + | 219 | WP_001171930.1 | protein YdfC | - |
| OO850_RS10005 (2046253) | 2046253..2046441 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| OO850_RS10010 (2046438) | 2046438..2046629 | + | 192 | WP_001090200.1 | DUF1482 family protein | - |
| OO850_RS10015 (2046722) | 2046722..2049193 | + | 2472 | WP_000048458.1 | exonuclease | - |
| OO850_RS10020 (2049266) | 2049266..2049517 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| OO850_RS10025 (2049552) | 2049552..2050234 | + | 683 | Protein_1966 | DUF3596 domain-containing protein | - |
| OO850_RS10030 (2050214) | 2050214..2050300 | - | 87 | Protein_1967 | hypothetical protein | - |
| OO850_RS10035 (2050506) | 2050506..2050832 | - | 327 | WP_001302046.1 | YnfA family protein | - |
| OO850_RS10040 (2050967) | 2050967..2051308 | + | 342 | WP_000705189.1 | DUF1283 family protein | - |
| OO850_RS10045 (2051343) | 2051343..2051903 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| OO850_RS10050 (2051906) | 2051906..2052616 | - | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| OO850_RS10055 (2052724) | 2052724..2053029 | + | 306 | WP_264831583.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|