MGE detailed information
MGE type: Genomic_island MGE length: 18696 bp
Accession: NZ_AP026114 Location: 5259794..5278489 Organism: Escherichia coli strain CEC01302 Replicon: chromosome
Accession: NZ_AP026114 Location: 5259794..5278489 Organism: Escherichia coli strain CEC01302 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO829_RS25890 (5254939) | 5254939..5256117 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| OO829_RS25895 (5256185) | 5256185..5257027 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| OO829_RS25900 (5257293) | 5257293..5259482 | - | 2190 | WP_000535067.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| OO829_RS25905 (5259794) | 5259794..5260060 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| OO829_RS25910 (5260057) | 5260057..5260824 | - | 768 | WP_000222489.1 | putative 2-hydroxyacyl-CoA dehydratase activator YjiL | - |
| OO829_RS25915 (5260834) | 5260834..5261985 | - | 1152 | WP_001301805.1 | double-cubane-cluster-containing anaerobic reductase | - |
| OO829_RS25920 (5262101) | 5262101..5263372 | - | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| OO829_RS25925 (5263413) | 5263413..5264645 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| OO829_RS25930 (5265112) | 5265112..5266044 | + | 933 | WP_000181144.1 | Recombination-promoting nuclease RpnD | VF |
| OO829_RS25935 (5266287) | 5266287..5267699 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| OO829_RS25940 (5267876) | 5267876..5268040 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| OO829_RS25945 (5268137) | 5268137..5269018 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| OO829_RS25950 (5269066) | 5269066..5270229 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| OO829_RS25955 (5270276) | 5270276..5270617 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - (5270612) | 5270612..5270688 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5270612) | 5270612..5270688 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5270612) | 5270612..5270688 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5270612) | 5270612..5270688 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5270612) | 5270612..5270688 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5270612) | 5270612..5270688 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5270612) | 5270612..5270688 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5270612) | 5270612..5270688 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| OO829_RS25960 (5270838) | 5270838..5272592 | - | 1755 | WP_097336120.1 | restriction endonuclease subunit S | - |
| OO829_RS25965 (5272592) | 5272592..5274061 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| OO829_RS25970 (5274128) | 5274128..5276560 | - | 2433 | WP_000819029.1 | DEAD/DEAH box helicase family protein | - |
| OO829_RS25975 (5276838) | 5276838..5277122 | + | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| OO829_RS25980 (5277131) | 5277131..5278489 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| OO829_RS25985 (5278558) | 5278558..5279514 | - | 957 | WP_001297640.1 | GTPase | - |
| OO829_RS25990 (5279525) | 5279525..5279728 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| OO829_RS25995 (5279778) | 5279778..5281928 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| OO829_RS26000 (5282221) | 5282221..5282763 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |