MGE detailed information
MGE type: Genomic_island MGE length: 18696 bp
Accession: NZ_AP026110 Location: 5323996..5342691 Organism: Escherichia coli strain CEC08123 Replicon: chromosome
Accession: NZ_AP026110 Location: 5323996..5342691 Organism: Escherichia coli strain CEC08123 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO855_RS26350 (5319153) | 5319153..5320331 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| OO855_RS26355 (5320399) | 5320399..5321241 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| OO855_RS26360 (5321507) | 5321507..5323684 | - | 2178 | WP_001474660.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| OO855_RS26365 (5323996) | 5323996..5324262 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| OO855_RS26370 (5324259) | 5324259..5325026 | - | 768 | WP_000222489.1 | putative 2-hydroxyacyl-CoA dehydratase activator YjiL | - |
| OO855_RS26375 (5325036) | 5325036..5326187 | - | 1152 | WP_001301805.1 | double-cubane-cluster-containing anaerobic reductase | - |
| OO855_RS26380 (5326303) | 5326303..5327574 | - | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| OO855_RS26385 (5327615) | 5327615..5328847 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| OO855_RS26390 (5329314) | 5329314..5330246 | + | 933 | WP_000181144.1 | Recombination-promoting nuclease RpnD | VF |
| OO855_RS26395 (5330489) | 5330489..5331901 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| OO855_RS26400 (5332078) | 5332078..5332242 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| OO855_RS26405 (5332339) | 5332339..5333220 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| OO855_RS26410 (5333268) | 5333268..5334431 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| OO855_RS26415 (5334478) | 5334478..5334819 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - (5334814) | 5334814..5334890 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5334814) | 5334814..5334890 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5334814) | 5334814..5334890 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5334814) | 5334814..5334890 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5334814) | 5334814..5334890 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5334814) | 5334814..5334890 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5334814) | 5334814..5334890 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5334814) | 5334814..5334890 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| OO855_RS26420 (5335040) | 5335040..5336794 | - | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| OO855_RS26425 (5336794) | 5336794..5338263 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| OO855_RS26430 (5338330) | 5338330..5340762 | - | 2433 | WP_000819029.1 | DEAD/DEAH box helicase family protein | - |
| OO855_RS26435 (5341040) | 5341040..5341324 | + | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| OO855_RS26440 (5341333) | 5341333..5342691 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| OO855_RS26445 (5342760) | 5342760..5343716 | - | 957 | WP_001297640.1 | GTPase | - |
| OO855_RS26450 (5343727) | 5343727..5343930 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| OO855_RS26455 (5343980) | 5343980..5346130 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| OO855_RS26460 (5346423) | 5346423..5346965 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |