MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_AP026110 Location: 5104327..5113678 Organism: Escherichia coli strain CEC08123 Replicon: chromosome
Accession: NZ_AP026110 Location: 5104327..5113678 Organism: Escherichia coli strain CEC08123 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO855_RS25380 (5101058) | 5101058..5101777 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| OO855_RS25385 (5101774) | 5101774..5103405 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| OO855_RS25390 (5103586) | 5103586..5103816 | + | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| OO855_RS25395 (5103828) | 5103828..5104100 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| OO855_RS25400 (5104327) | 5104327..5104623 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| OO855_RS25405 (5104651) | 5104651..5104824 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| OO855_RS25410 (5104943) | 5104943..5106460 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| OO855_RS25415 (5106697) | 5106697..5108154 | - | 1458 | WP_000856824.1 | dipeptide/tripeptide permease DtpC | - |
| OO855_RS25420 (5108213) | 5108213..5110360 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| OO855_RS25425 (5110440) | 5110440..5111774 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| OO855_RS25430 (5112140) | 5112140..5113678 | - | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| OO855_RS25440 (5114477) | 5114477..5115052 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| OO855_RS25445 (5115089) | 5115089..5116786 | - | 1698 | WP_000068986.1 | protein-disulfide reductase DsbD | - |
| OO855_RS25450 (5116762) | 5116762..5117100 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| OO855_RS25455 (5117216) | 5117216..5118519 | - | 1304 | Protein_4974 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |