MGE detailed information
MGE type: Genomic_island MGE length: 10041 bp
Accession: NZ_AP026110 Location: 3917926..3927966 Organism: Escherichia coli strain CEC08123 Replicon: chromosome
Accession: NZ_AP026110 Location: 3917926..3927966 Organism: Escherichia coli strain CEC08123 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO855_RS19620 (3913124) | 3913124..3914332 | - | 1209 | WP_001301837.1 | propionate kinase | - |
| OO855_RS19625 (3914358) | 3914358..3915689 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| OO855_RS19630 (3915711) | 3915711..3916700 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| OO855_RS19635 (3916799) | 3916799..3917737 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| OO855_RS19640 (3918052) | 3918052..3918270 | + | 219 | WP_000033206.1 | transcriptional activator TdcR | - |
| OO855_RS19645 (3918526) | 3918526..3919065 | + | 540 | WP_000675739.1 | protein YhaB | - |
| OO855_RS19650 (3919087) | 3919087..3920274 | + | 1188 | WP_000484640.1 | YhaC family protein | - |
| OO855_RS19660 (3920790) | 3920790..3921935 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| OO855_RS19665 (3922032) | 3922032..3922922 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| OO855_RS19670 (3922952) | 3922952..3923722 | - | 771 | WP_001058231.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| OO855_RS19675 (3923738) | 3923738..3925072 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| OO855_RS19680 (3925447) | 3925447..3927018 | + | 1572 | WP_001273776.1 | galactarate dehydratase | - |
| OO855_RS19685 (3927167) | 3927167..3927502 | + | 336 | WP_001302819.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| OO855_RS19690 (3927502) | 3927502..3927966 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| OO855_RS19695 (3928021) | 3928021..3928830 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| OO855_RS19700 (3929079) | 3929079..3930359 | + | 1281 | WP_000681927.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| OO855_RS19705 (3930382) | 3930382..3930855 | + | 474 | WP_001301475.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| OO855_RS19710 (3930866) | 3930866..3931645 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| OO855_RS19715 (3931635) | 3931635..3932513 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| OO855_RS19720 (3932531) | 3932531..3932965 | + | 435 | WP_000948831.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0 |