MGE detailed information
MGE type: Genomic_island MGE length: 18696 bp
Accession: NZ_AP026108 Location: 5460107..5478802 Organism: Escherichia coli strain CEC13091 Replicon: chromosome
Accession: NZ_AP026108 Location: 5460107..5478802 Organism: Escherichia coli strain CEC13091 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO842_RS27155 (5455282) | 5455282..5456460 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| OO842_RS27160 (5456528) | 5456528..5457370 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| OO842_RS27165 (5457636) | 5457636..5459795 | - | 2160 | WP_264822715.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| OO842_RS27170 (5460107) | 5460107..5460373 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| OO842_RS27175 (5460370) | 5460370..5461137 | - | 768 | WP_000222489.1 | putative 2-hydroxyacyl-CoA dehydratase activator YjiL | - |
| OO842_RS27180 (5461147) | 5461147..5462298 | - | 1152 | WP_001301805.1 | double-cubane-cluster-containing anaerobic reductase | - |
| OO842_RS27185 (5462414) | 5462414..5463685 | - | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| OO842_RS27190 (5463726) | 5463726..5464958 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| OO842_RS27195 (5465425) | 5465425..5466357 | + | 933 | WP_000181144.1 | Recombination-promoting nuclease RpnD | VF |
| OO842_RS27200 (5466600) | 5466600..5468012 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| OO842_RS27205 (5468189) | 5468189..5468353 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| OO842_RS27210 (5468450) | 5468450..5469331 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| OO842_RS27215 (5469379) | 5469379..5470542 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| OO842_RS27220 (5470589) | 5470589..5470930 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - (5470925) | 5470925..5471001 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5470925) | 5470925..5471001 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5470925) | 5470925..5471001 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5470925) | 5470925..5471001 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5470925) | 5470925..5471001 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5470925) | 5470925..5471001 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5470925) | 5470925..5471001 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5470925) | 5470925..5471001 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| OO842_RS27225 (5471151) | 5471151..5472905 | - | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| OO842_RS27230 (5472905) | 5472905..5474374 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| OO842_RS27235 (5474441) | 5474441..5476873 | - | 2433 | WP_000819029.1 | DEAD/DEAH box helicase family protein | - |
| OO842_RS27240 (5477151) | 5477151..5477435 | + | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| OO842_RS27245 (5477444) | 5477444..5478802 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| OO842_RS27250 (5478871) | 5478871..5479827 | - | 957 | WP_001297640.1 | GTPase | - |
| OO842_RS27255 (5479838) | 5479838..5480041 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| OO842_RS27260 (5480091) | 5480091..5482241 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| OO842_RS27265 (5482534) | 5482534..5483076 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |