MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_AP026108 Location: 5240556..5249907 Organism: Escherichia coli strain CEC13091 Replicon: chromosome
Accession: NZ_AP026108 Location: 5240556..5249907 Organism: Escherichia coli strain CEC13091 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO842_RS26185 (5237287) | 5237287..5238006 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| OO842_RS26190 (5238003) | 5238003..5239634 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| OO842_RS26195 (5239815) | 5239815..5240045 | + | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| OO842_RS26200 (5240057) | 5240057..5240329 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| OO842_RS26205 (5240556) | 5240556..5240852 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| OO842_RS26210 (5240880) | 5240880..5241053 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| OO842_RS26215 (5241172) | 5241172..5242689 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| OO842_RS26220 (5242926) | 5242926..5244383 | - | 1458 | WP_000856824.1 | dipeptide/tripeptide permease DtpC | - |
| OO842_RS26225 (5244442) | 5244442..5246589 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| OO842_RS26230 (5246669) | 5246669..5248003 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| OO842_RS26235 (5248369) | 5248369..5249907 | - | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| OO842_RS26245 (5250706) | 5250706..5251281 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| OO842_RS26250 (5251318) | 5251318..5253015 | - | 1698 | WP_000068986.1 | protein-disulfide reductase DsbD | - |
| OO842_RS26255 (5252991) | 5252991..5253329 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| OO842_RS26260 (5253445) | 5253445..5254746 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |