MGE detailed information
MGE type: Genomic_island MGE length: 9441 bp
Accession: NZ_AP026106 Location: 3873499..3882939 Organism: Escherichia coli strain CEC01311 Replicon: chromosome
Accession: NZ_AP026106 Location: 3873499..3882939 Organism: Escherichia coli strain CEC01311 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO831_RS19240 (3869331) | 3869331..3870662 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| OO831_RS19245 (3870684) | 3870684..3871673 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| OO831_RS19250 (3871772) | 3871772..3872710 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| OO831_RS19255 (3873025) | 3873025..3873243 | + | 219 | WP_000033206.1 | transcriptional activator TdcR | - |
| OO831_RS19260 (3873499) | 3873499..3874038 | + | 540 | WP_000675739.1 | protein YhaB | - |
| OO831_RS19265 (3874060) | 3874060..3875247 | + | 1188 | WP_000484640.1 | YhaC family protein | - |
| OO831_RS19275 (3875763) | 3875763..3876908 | - | 1146 | WP_001301934.1 | glycerate 2-kinase | - |
| OO831_RS19280 (3877005) | 3877005..3877895 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| OO831_RS19285 (3877925) | 3877925..3878695 | - | 771 | WP_001058231.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| OO831_RS19290 (3878711) | 3878711..3880045 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| OO831_RS19295 (3880420) | 3880420..3881991 | + | 1572 | WP_001273776.1 | galactarate dehydratase | - |
| OO831_RS19300 (3882140) | 3882140..3882475 | + | 336 | WP_001302819.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| OO831_RS19305 (3882475) | 3882475..3882939 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| OO831_RS19310 (3882994) | 3882994..3883803 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| OO831_RS19315 (3884052) | 3884052..3885332 | + | 1281 | WP_000681927.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| OO831_RS19320 (3885355) | 3885355..3885828 | + | 474 | WP_001301475.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| OO831_RS19325 (3885839) | 3885839..3886618 | + | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| OO831_RS19330 (3886608) | 3886608..3887486 | + | 879 | WP_001295548.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| OO831_RS19335 (3887504) | 3887504..3887938 | + | 435 | WP_000948831.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Genomic island | TA20368 | NC_002695 | 4007011..4017164 | 0.002 |