MGE detailed information
MGE type: Genomic_island MGE length: 18721 bp
Accession: NZ_AP026104 Location: 5319011..5337731 Organism: Escherichia coli strain CEC96047 Replicon: chromosome
Accession: NZ_AP026104 Location: 5319011..5337731 Organism: Escherichia coli strain CEC96047 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO843_RS26385 (5314162) | 5314162..5315340 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| OO843_RS26390 (5315408) | 5315408..5316250 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| OO843_RS26395 (5316516) | 5316516..5318699 | - | 2184 | WP_000535062.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| OO843_RS26400 (5319011) | 5319011..5319277 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| OO843_RS26405 (5319274) | 5319274..5320041 | - | 768 | WP_000222489.1 | putative 2-hydroxyacyl-CoA dehydratase activator YjiL | - |
| OO843_RS26410 (5320051) | 5320051..5321202 | - | 1152 | WP_001301805.1 | double-cubane-cluster-containing anaerobic reductase | - |
| OO843_RS26415 (5321318) | 5321318..5322589 | - | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| OO843_RS26420 (5322630) | 5322630..5323862 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| OO843_RS26425 (5324329) | 5324329..5325111 | + | 783 | WP_001303778.1 | Recombination-promoting nuclease RpnD | VF |
| OO843_RS27165 (5325086) | 5325086..5325286 | + | 201 | WP_001310455.1 | hypothetical protein | - |
| OO843_RS26430 (5325529) | 5325529..5326941 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| OO843_RS26435 (5327118) | 5327118..5327282 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| OO843_RS26440 (5327379) | 5327379..5328260 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| OO843_RS26445 (5328308) | 5328308..5329471 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| OO843_RS26450 (5329518) | 5329518..5329859 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - (5329854) | 5329854..5329930 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5329854) | 5329854..5329930 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5329854) | 5329854..5329930 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5329854) | 5329854..5329930 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5329854) | 5329854..5329930 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5329854) | 5329854..5329930 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5329854) | 5329854..5329930 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5329854) | 5329854..5329930 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| OO843_RS26455 (5330080) | 5330080..5331834 | - | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| OO843_RS26460 (5331834) | 5331834..5333303 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| OO843_RS26465 (5333370) | 5333370..5335802 | - | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| OO843_RS26470 (5336080) | 5336080..5336364 | + | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| OO843_RS26475 (5336373) | 5336373..5337731 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| OO843_RS26480 (5337800) | 5337800..5338756 | - | 957 | WP_001297640.1 | GTPase | - |
| OO843_RS26485 (5338767) | 5338767..5338970 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| OO843_RS26490 (5339020) | 5339020..5341170 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| OO843_RS26495 (5341463) | 5341463..5342005 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |