MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 32822 bp
Accession: NZ_AP026103 Location: 1..32822 Organism: Escherichia coli strain 93_161312 Replicon: plasmid pNIID93_2
Accession: NZ_AP026103 Location: 1..32822 Organism: Escherichia coli strain 93_161312 Replicon: plasmid pNIID93_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO868_RS28060 (CL8NIID93_53900) | 1..1005 | + | 1005 | WP_001208090.1 | replication initiation protein | - |
| OO868_RS28065 (CL8NIID93_53910) | 1247..1585 | - | 339 | WP_000612441.1 | hypothetical protein | VF |
| OO868_RS28070 (CL8NIID93_53920) | 1784..2071 | + | 288 | WP_000332251.1 | helix-turn-helix transcriptional regulator | - |
| OO868_RS28075 (CL8NIID93_53930) | 2112..2345 | - | 234 | WP_001056371.1 | EexN family lipoprotein | - |
| OO868_RS28080 (CL8NIID93_53940) | 2358..2999 | - | 642 | WP_000844300.1 | type IV secretion system protein | - |
| OO868_RS28085 (CL8NIID93_53950) | 3001..3996 | - | 996 | WP_001103652.1 | type IV secretion system protein | - |
| OO868_RS28090 (CL8NIID93_53970) | 4329..4940 | + | 612 | WP_000603936.1 | Type IV secretion system protein virB1 | VF |
| OO868_RS28095 (CL8NIID93_53980) | 4933..5226 | + | 294 | WP_001031683.1 | TrbC/VirB2 family protein | - |
| OO868_RS28100 (CL8NIID93_53990) | 5284..5604 | + | 321 | WP_137556328.1 | VirB3 family type IV secretion system protein | - |
| OO868_RS28105 (CL8NIID93_54000) | 5607..7979 | + | 2373 | WP_137556326.1 | VirB4 family type IV secretion system protein | - |
| OO868_RS28110 (CL8NIID93_54010) | 8110..8847 | + | 738 | WP_000364525.1 | Type IV secretion system protein PtlE | VF |
| OO868_RS28115 (CL8NIID93_54020) | 8844..9623 | + | 780 | WP_000592647.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| OO868_RS28120 (CL8NIID93_54030) | 9613..10755 | + | 1143 | WP_000787415.1 | Type IV secretion system protein virB10 | VF |
| OO868_RS28125 (CL8NIID93_54040) | 10755..11774 | + | 1020 | WP_001287983.1 | Type IV secretion system protein VirB11 | VF |
| OO868_RS28130 (CL8NIID93_54050) | 11825..13792 | + | 1968 | WP_000726939.1 | type IV secretory system conjugative DNA transfer family protein | - |
| OO868_RS28135 (CL8NIID93_54060) | 13808..14113 | + | 306 | WP_001223992.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| OO868_RS28140 (CL8NIID93_54070) | 14254..14841 | + | 588 | WP_000280693.1 | DUF6012 family protein | - |
| OO868_RS28145 (CL8NIID93_54080) | 14853..17009 | + | 2157 | WP_001235740.1 | type IA DNA topoisomerase | - |
| OO868_RS28150 (CL8NIID93_54090) | 17172..17357 | + | 186 | WP_000425267.1 | hypothetical protein | - |
| OO868_RS28155 (CL8NIID93_54100) | 17689..17985 | + | 297 | WP_000753311.1 | hypothetical protein | - |
| OO868_RS28325 | 18438..18533 | + | 96 | WP_000609147.1 | DinQ-like type I toxin DqlB | - |
| OO868_RS28160 (CL8NIID93_54110) | 19049..19864 | + | 816 | WP_000018884.1 | Tyrosine recombinase XerD | VF |
| OO868_RS28165 (CL8NIID93_54120) | 19979..20638 | + | 660 | WP_000516225.1 | peptidyl-arginine deiminase | - |
| OO868_RS28170 (CL8NIID93_54140) | 21343..21645 | + | 303 | WP_001096504.1 | hypothetical protein | - |
| OO868_RS28175 (CL8NIID93_54150) | 21723..24920 | - | 3198 | WP_000586933.1 | hypothetical protein | - |
| OO868_RS28180 (CL8NIID93_54160) | 24917..25252 | - | 336 | WP_000963830.1 | hypothetical protein | Relaxase |
| OO868_RS28185 (CL8NIID93_54170) | 25598..26005 | + | 408 | WP_001190619.1 | hypothetical protein | - |
| OO868_RS28190 (CL8NIID93_54180) | 26015..26776 | + | 762 | WP_001097937.1 | conjugal transfer protein TraL | - |
| OO868_RS28195 (CL8NIID93_54190) | 26773..27477 | + | 705 | WP_001279868.1 | hypothetical protein | - |
| OO868_RS28200 (CL8NIID93_54200) | 27506..27943 | - | 438 | WP_000466317.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| OO868_RS28205 | 27968..28150 | - | 183 | WP_000833471.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| OO868_RS28210 (CL8NIID93_54220) | 28580..28858 | - | 279 | WP_000545934.1 | hypothetical protein | - |
| OO868_RS28215 (CL8NIID93_54230) | 28916..29245 | - | 330 | WP_000449469.1 | hypothetical protein | - |
| OO868_RS28220 (CL8NIID93_54240) | 29685..29927 | - | 243 | WP_001450803.1 | hypothetical protein | - |
| OO868_RS28225 (CL8NIID93_54250) | 29917..30183 | - | 267 | WP_000868275.1 | hypothetical protein | - |
| OO868_RS28230 (CL8NIID93_54260) | 30234..30458 | - | 225 | WP_000749827.1 | hypothetical protein | - |
| OO868_RS28235 (CL8NIID93_54270) | 30554..30778 | - | 225 | WP_000866040.1 | hypothetical protein | - |
| OO868_RS28240 (CL8NIID93_54280) | 30819..31142 | - | 324 | WP_000432877.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|