MGE detailed information
MGE type: Genomic_island MGE length: 18721 bp
Accession: NZ_AP026101 Location: 5442342..5461062 Organism: Escherichia coli strain 93_161312 Replicon: chromosome
Accession: NZ_AP026101 Location: 5442342..5461062 Organism: Escherichia coli strain 93_161312 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO868_RS27200 (5437499) | 5437499..5438677 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| OO868_RS27205 (5438745) | 5438745..5439587 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| OO868_RS27210 (5439853) | 5439853..5442030 | - | 2178 | WP_000535057.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| OO868_RS27215 (5442342) | 5442342..5442608 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| OO868_RS27220 (5442605) | 5442605..5443372 | - | 768 | WP_000222489.1 | putative 2-hydroxyacyl-CoA dehydratase activator YjiL | - |
| OO868_RS27225 (5443382) | 5443382..5444533 | - | 1152 | WP_001301805.1 | double-cubane-cluster-containing anaerobic reductase | - |
| OO868_RS27230 (5444649) | 5444649..5445920 | - | 1272 | WP_001037407.1 | DUF445 domain-containing protein | - |
| OO868_RS27235 (5445961) | 5445961..5447193 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| OO868_RS27240 (5447660) | 5447660..5448442 | + | 783 | WP_001303778.1 | Recombination-promoting nuclease RpnD | VF |
| OO868_RS28320 (5448417) | 5448417..5448617 | + | 201 | WP_001310455.1 | hypothetical protein | - |
| OO868_RS27245 (5448860) | 5448860..5450272 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| OO868_RS27250 (5450449) | 5450449..5450613 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| OO868_RS27255 (5450710) | 5450710..5451591 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| OO868_RS27260 (5451639) | 5451639..5452802 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| OO868_RS27265 (5452849) | 5452849..5453190 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - (5453185) | 5453185..5453261 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5453185) | 5453185..5453261 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5453185) | 5453185..5453261 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5453185) | 5453185..5453261 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5453185) | 5453185..5453261 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5453185) | 5453185..5453261 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5453185) | 5453185..5453261 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5453185) | 5453185..5453261 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| OO868_RS27270 (5453411) | 5453411..5455165 | - | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| OO868_RS27275 (5455165) | 5455165..5456634 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| OO868_RS27280 (5456701) | 5456701..5459133 | - | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| OO868_RS27285 (5459411) | 5459411..5459695 | + | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| OO868_RS27290 (5459704) | 5459704..5461062 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| OO868_RS27295 (5461131) | 5461131..5462087 | - | 957 | WP_001297640.1 | GTPase | - |
| OO868_RS27300 (5462098) | 5462098..5462301 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| OO868_RS27305 (5462351) | 5462351..5464501 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| OO868_RS27310 (5464794) | 5464794..5465336 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |