MGE detailed information
MGE type: Genomic_island MGE length: 18721 bp
Accession: NZ_AP026095 Location: 5314855..5333575 Organism: Escherichia coli strain 53_142304 Replicon: chromosome
Accession: NZ_AP026095 Location: 5314855..5333575 Organism: Escherichia coli strain 53_142304 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO816_RS26365 (5310018) | 5310018..5311196 | - | 1179 | WP_001089435.1 | MFS transporter | - |
| OO816_RS26370 (5311264) | 5311264..5312106 | - | 843 | WP_000746206.1 | YjiK family protein | - |
| OO816_RS26375 (5312372) | 5312372..5314543 | - | 2172 | WP_065222521.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| OO816_RS26380 (5314855) | 5314855..5315121 | - | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| OO816_RS26385 (5315118) | 5315118..5315885 | - | 768 | WP_000222489.1 | putative 2-hydroxyacyl-CoA dehydratase activator YjiL | - |
| OO816_RS26390 (5315895) | 5315895..5317046 | - | 1152 | WP_001301805.1 | double-cubane-cluster-containing anaerobic reductase | - |
| OO816_RS26395 (5317162) | 5317162..5318433 | - | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| OO816_RS26400 (5318474) | 5318474..5319706 | - | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| OO816_RS26405 (5320173) | 5320173..5320955 | + | 783 | WP_001303778.1 | Recombination-promoting nuclease RpnD | VF |
| OO816_RS27300 (5320930) | 5320930..5321130 | + | 201 | WP_001310455.1 | hypothetical protein | - |
| OO816_RS26410 (5321373) | 5321373..5322785 | - | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| OO816_RS26415 (5322962) | 5322962..5323126 | + | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| OO816_RS26420 (5323223) | 5323223..5324104 | + | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| OO816_RS26425 (5324152) | 5324152..5325315 | + | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| OO816_RS26430 (5325362) | 5325362..5325703 | - | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| - (5325698) | 5325698..5325774 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5325698) | 5325698..5325774 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5325698) | 5325698..5325774 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5325698) | 5325698..5325774 | + | 77 | NuclAT_14 | - | Antitoxin Detail |
| - (5325698) | 5325698..5325774 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5325698) | 5325698..5325774 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5325698) | 5325698..5325774 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (5325698) | 5325698..5325774 | + | 77 | NuclAT_15 | - | Antitoxin Detail |
| OO816_RS26435 (5325924) | 5325924..5327678 | - | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| OO816_RS26440 (5327678) | 5327678..5329147 | - | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| OO816_RS26445 (5329214) | 5329214..5331646 | - | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| OO816_RS26450 (5331924) | 5331924..5332208 | + | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| OO816_RS26455 (5332217) | 5332217..5333575 | + | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| OO816_RS26460 (5333644) | 5333644..5334600 | - | 957 | WP_001297640.1 | GTPase | - |
| OO816_RS26465 (5334611) | 5334611..5334814 | - | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| OO816_RS26470 (5334864) | 5334864..5337014 | - | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| OO816_RS26475 (5337307) | 5337307..5337849 | - | 543 | WP_000934391.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0 |