MGE detailed information
MGE type: Prophage MGE length: 57327 bp
Accession: NZ_AP026095 Location: 2561620..2618946 Organism: Escherichia coli strain 53_142304 Replicon: chromosome
Accession: NZ_AP026095 Location: 2561620..2618946 Organism: Escherichia coli strain 53_142304 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO816_RS12900 (2557869) | 2557869..2560295 | - | 2427 | WP_000041704.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| OO816_RS12905 (2560494) | 2560494..2560799 | - | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| OO816_RS12910 (2560907) | 2560907..2561617 | + | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| OO816_RS12915 (2561620) | 2561620..2562180 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| OO816_RS12920 (2562215) | 2562215..2562556 | - | 342 | WP_000705189.1 | DUF1283 family protein | - |
| OO816_RS12925 (2562691) | 2562691..2563017 | + | 327 | WP_001302046.1 | YnfA family protein | - |
| OO816_RS12930 (2563223) | 2563223..2563309 | + | 87 | Protein_2533 | hypothetical protein | - |
| OO816_RS12935 (2563289) | 2563289..2563971 | - | 683 | Protein_2534 | DUF3596 domain-containing protein | - |
| OO816_RS12940 (2564006) | 2564006..2564257 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| OO816_RS12945 (2564330) | 2564330..2565724 | - | 1395 | Protein_2536 | 3'-5' exoribonuclease | - |
| OO816_RS12955 (2567029) | 2567029..2568114 | - | 1086 | Protein_2538 | exonuclease | - |
| OO816_RS12960 (2568207) | 2568207..2568398 | - | 192 | WP_001090200.1 | DUF1482 family protein | - |
| OO816_RS12965 (2568395) | 2568395..2568583 | - | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| OO816_RS12970 (2569152) | 2569152..2569370 | - | 219 | WP_001171930.1 | protein YdfC | - |
| OO816_RS12975 (2569442) | 2569442..2569741 | - | 300 | WP_001240334.1 | hypothetical protein | - |
| OO816_RS12980 (2570093) | 2570093..2570371 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| OO816_RS12985 (2570373) | 2570373..2570564 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| OO816_RS12990 (2570585) | 2570585..2570956 | - | 372 | WP_001169686.1 | hypothetical protein | - |
| OO816_RS12995 (2571054) | 2571054..2571356 | + | 303 | WP_000172738.1 | transcriptional regulator | - |
| OO816_RS13000 (2571353) | 2571353..2571778 | + | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| OO816_RS13005 (2571801) | 2571801..2572763 | + | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| OO816_RS13010 (2572770) | 2572770..2573510 | + | 741 | WP_000788939.1 | ATP-binding protein | - |
| OO816_RS13015 (2573536) | 2573536..2574305 | + | 770 | Protein_2550 | DUF1627 domain-containing protein | - |
| OO816_RS13020 (2574321) | 2574321..2574716 | + | 396 | WP_001118159.1 | DUF977 family protein | - |
| OO816_RS13025 (2574773) | 2574773..2575357 | + | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| OO816_RS13030 (2575473) | 2575473..2575577 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| OO816_RS13035 (2575823) | 2575823..2575978 | + | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| OO816_RS13040 (2576146) | 2576146..2576424 | + | 279 | WP_012779366.1 | hypothetical protein | - |
| OO816_RS13045 (2576426) | 2576426..2577475 | + | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| OO816_RS13050 (2577488) | 2577488..2577847 | + | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| OO816_RS13055 (2577844) | 2577844..2578533 | + | 690 | WP_001059381.1 | bacteriophage antitermination protein Q | - |
| OO816_RS13075 (2579170) | 2579170..2579598 | + | 429 | WP_001303509.1 | tellurite resistance protein | - |
| OO816_RS13080 (2579595) | 2579595..2579762 | + | 168 | WP_000216653.1 | DUF3927 family protein | - |
| OO816_RS13085 (2579957) | 2579957..2580100 | - | 144 | Protein_2561 | hypothetical protein | - |
| OO816_RS13090 (2580077) | 2580077..2581927 | + | 1851 | WP_064234946.1 | SASA family carbohydrate esterase | - |
| OO816_RS13095 (2582366) | 2582366..2582581 | + | 216 | WP_024180155.1 | class II holin family protein | - |
| OO816_RS13100 (2582586) | 2582586..2582930 | + | 345 | WP_000731241.1 | YdfR family protein | - |
| OO816_RS13105 (2582981) | 2582981..2583514 | + | 534 | WP_000992148.1 | lysozyme | - |
| OO816_RS13110 (2583785) | 2583785..2584354 | + | 570 | WP_001056806.1 | phage antirepressor N-terminal domain-containing protein | - |
| OO816_RS13115 (2584354) | 2584354..2584500 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| OO816_RS13120 (2584728) | 2584728..2584913 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| OO816_RS13125 (2585338) | 2585338..2585565 | - | 228 | WP_000095736.1 | YlcI/YnfO family protein | - |
| OO816_RS13130 (2585607) | 2585607..2585972 | + | 366 | WP_015994246.1 | HNH endonuclease | - |
| OO816_RS13135 (2586262) | 2586262..2586825 | + | 564 | WP_000958392.1 | terminase small subunit | - |
| OO816_RS13140 (2586822) | 2586822..2588483 | + | 1662 | WP_001303179.1 | terminase large subunit | - |
| OO816_RS13145 (2588547) | 2588547..2590484 | + | 1938 | WP_000173065.1 | phage major capsid protein | - |
| OO816_RS13150 (2590529) | 2590529..2590750 | + | 222 | WP_001063023.1 | hypothetical protein | - |
| OO816_RS13155 (2590696) | 2590696..2592793 | + | 2098 | Protein_2575 | phage portal protein | - |
| OO816_RS13160 (2592790) | 2592790..2593116 | + | 327 | WP_000125988.1 | head-tail connector protein | - |
| OO816_RS13165 (2593126) | 2593126..2593476 | + | 351 | WP_001007901.1 | phage head closure protein | - |
| OO816_RS13170 (2593473) | 2593473..2593919 | + | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| OO816_RS13175 (2593916) | 2593916..2594260 | + | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| OO816_RS13180 (2594319) | 2594319..2595035 | + | 717 | WP_001275508.1 | major tail subunit | - |
| OO816_RS13185 (2595041) | 2595041..2595415 | + | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| OO816_RS13190 (2595511) | 2595511..2595720 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| OO816_RS13195 (2595772) | 2595772..2599014 | + | 3243 | WP_000212920.1 | phage tail tape measure protein | - |
| OO816_RS13200 (2599007) | 2599007..2599348 | + | 342 | WP_000807954.1 | phage tail protein | - |
| OO816_RS13205 (2599348) | 2599348..2600046 | + | 699 | WP_001303180.1 | phage minor tail protein L | - |
| OO816_RS13210 (2600057) | 2600057..2600800 | + | 744 | WP_000194720.1 | C40 family peptidase | - |
| OO816_RS13215 (2600797) | 2600797..2601378 | + | 582 | WP_001089999.1 | tail assembly protein | - |
| OO816_RS13220 (2601721) | 2601721..2603231 | + | 1511 | Protein_2588 | host specificity protein J | - |
| OO816_RS13225 (2603231) | 2603231..2605798 | + | 2568 | Protein_2589 | host specificity protein J | - |
| OO816_RS13230 (2605866) | 2605866..2606465 | + | 600 | WP_001230508.1 | Outer membrane protein X | VF |
| OO816_RS13235 (2606530) | 2606530..2607843 | + | 1314 | WP_000268849.1 | ISNCY family transposase KIS | Transposase |
| OO816_RS13240 (2607845) | 2607845..2608114 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| OO816_RS13245 (2608228) | 2608228..2608803 | + | 576 | WP_001131658.1 | hypothetical protein | VF |
| OO816_RS13250 (2608876) | 2608876..2609505 | + | 630 | WP_001356599.1 | hypothetical protein | VF |
| OO816_RS13255 (2609587) | 2609587..2610228 | + | 642 | WP_001143804.1 | hypothetical protein | VF |
| OO816_RS13260 (2610390) | 2610390..2610632 | - | 243 | WP_001120551.1 | DinI-like family protein | - |
| OO816_RS13265 (2610764) | 2610764..2612047 | + | 1284 | Protein_2597 | MHS family MFS transporter YdfJ | - |
| OO816_RS13270 (2612136) | 2612136..2613596 | + | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| OO816_RS13275 (2613632) | 2613632..2613835 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| OO816_RS13280 (2614012) | 2614012..2614698 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| OO816_RS13285 (2614787) | 2614787..2615533 | - | 747 | WP_000636568.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| OO816_RS13290 (2615670) | 2615670..2617715 | + | 2046 | WP_001302117.1 | peptidyl-dipeptidase Dcp | - |
| OO816_RS13295 (2617760) | 2617760..2618278 | - | 519 | WP_001024796.1 | 2-oxo-tetronate isomerase | - |
| OO816_RS13300 (2618554) | 2618554..2618946 | + | 393 | WP_000671724.1 | YdeI family stress tolerance OB fold protein | - |
| OO816_RS13305 (2619201) | 2619201..2620091 | + | 891 | WP_000592852.1 | diguanylate cyclase DgcZ | - |
| OO816_RS13310 (2620206) | 2620206..2620310 | - | 105 | WP_211180496.1 | protein MgtT | - |
| OO816_RS13315 (2620310) | 2620310..2620405 | - | 96 | WP_000901365.1 | protein MgtS | - |
| OO816_RS13320 (2620513) | 2620513..2621484 | - | 972 | WP_001310251.1 | transcriptional regulator FtrA | - |
| OO816_RS13325 (2621579) | 2621579..2621974 | + | 396 | WP_001271101.1 | rhodanese-like domain-containing protein | - |
| OO816_RS13330 (2622015) | 2622015..2623202 | - | 1188 | WP_001054199.1 | efflux MFS transporter YdeE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|