MGE detailed information
MGE type: Prophage MGE length: 66983 bp
Accession: NZ_AP026092 Location: 1331705..1398687 Organism: Escherichia coli strain 27_141091 Replicon: chromosome
Accession: NZ_AP026092 Location: 1331705..1398687 Organism: Escherichia coli strain 27_141091 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO959_RS06320 (1327788) | 1327788..1328429 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| OO959_RS06325 (1328485) | 1328485..1329663 | - | 1179 | WP_000173471.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| OO959_RS06330 (1329797) | 1329797..1330087 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| OO959_RS06335 (1330154) | 1330154..1330510 | + | 357 | WP_001295500.1 | protein YebF | - |
| OO959_RS06340 (1330837) | 1330837..1331496 | + | 660 | WP_000024742.1 | DUF533 domain-containing protein | - |
| OO959_RS06345 (1331705) | 1331705..1333765 | + | 2061 | WP_151542861.1 | oligopeptidase B | - |
| OO959_RS06350 (1333762) | 1333762..1334424 | - | 663 | WP_000944244.1 | exodeoxyribonuclease X | - |
| OO959_RS06355 (1334448) | 1334448..1335104 | - | 657 | WP_000011656.1 | carbon-nitrogen hydrolase family protein YobB | - |
| OO959_RS06360 (1335206) | 1335206..1335436 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| OO959_RS06365 (1335575) | 1335575..1335949 | + | 375 | WP_000168751.1 | CopC domain-containing protein YobA | - |
| OO959_RS06370 (1335953) | 1335953..1336825 | + | 873 | WP_000879314.1 | copper homeostasis membrane protein CopD | - |
| OO959_RS06375 (1336838) | 1336838..1337179 | + | 342 | WP_000976483.1 | YebY family protein | - |
| OO959_RS06380 (1337572) | 1337572..1338648 | - | 1077 | WP_045893699.1 | hypothetical protein ; Integrase | Integrase |
| OO959_RS06385 (1338614) | 1338614..1338895 | - | 282 | WP_001311878.1 | excisionase | - |
| - (1339006) | 1339006..1339184 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1339006) | 1339006..1339184 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1339006) | 1339006..1339184 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (1339006) | 1339006..1339184 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| OO959_RS06390 (1339002) | 1339002..1339190 | - | 189 | WP_001356607.1 | DUF1187 family protein | - |
| OO959_RS06395 (1339183) | 1339183..1339377 | - | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| OO959_RS06400 (1339434) | 1339434..1340243 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| OO959_RS06405 (1340236) | 1340236..1342905 | - | 2670 | WP_000102194.1 | exodeoxyribonuclease VIII | - |
| OO959_RS06410 (1342986) | 1342986..1343156 | - | 171 | WP_001427414.1 | YdaE family protein | - |
| OO959_RS06415 (1343156) | 1343156..1343377 | - | 222 | WP_000560228.1 | killing protein KilR | - |
| OO959_RS06420 (1343424) | 1343424..1344275 | - | 852 | WP_062882198.1 | Rha family phage regulatory protein | - |
| OO959_RS06425 (1344690) | 1344690..1344842 | - | 153 | WP_001169149.1 | DUF1391 family protein | - |
| OO959_RS06430 (1344853) | 1344853..1344987 | - | 135 | WP_000233812.1 | hypothetical protein | - |
| OO959_RS06435 (1345223) | 1345223..1345687 | - | 465 | WP_001253182.1 | helix-turn-helix domain-containing protein | - |
| OO959_RS06440 (1345792) | 1345792..1346067 | + | 276 | WP_062881721.1 | YdaS family helix-turn-helix protein | - |
| OO959_RS06445 (1346051) | 1346051..1346473 | + | 423 | WP_000702023.1 | toxin YdaT family protein | - |
| OO959_RS06450 (1346486) | 1346486..1347343 | + | 858 | WP_000899743.1 | YdaU family protein | - |
| OO959_RS06455 (1347350) | 1347350..1348096 | + | 747 | WP_062881720.1 | ATP-binding protein | - |
| OO959_RS06460 (1348118) | 1348118..1348879 | + | 762 | WP_151542863.1 | DUF1627 domain-containing protein | - |
| OO959_RS06465 (1348896) | 1348896..1349318 | + | 423 | WP_151542866.1 | DUF977 family protein | - |
| OO959_RS06470 (1349424) | 1349424..1349636 | + | 213 | WP_000072553.1 | hypothetical protein | - |
| OO959_RS06475 (1349669) | 1349669..1349886 | + | 218 | Protein_1266 | DUF4014 family protein | - |
| OO959_RS06480 (1349888) | 1349888..1350151 | + | 264 | WP_151542868.1 | hypothetical protein | - |
| OO959_RS06485 (1350162) | 1350162..1350287 | + | 126 | Protein_1268 | hypothetical protein | - |
| OO959_RS06490 (1350843) | 1350843..1351031 | + | 189 | WP_001496105.1 | DUF551 domain-containing protein | - |
| OO959_RS06495 (1351147) | 1351147..1351251 | + | 105 | WP_001278450.1 | hypothetical protein | - |
| OO959_RS06500 (1351498) | 1351498..1351653 | + | 156 | WP_012578894.1 | type I toxin-antitoxin system toxin HokD | - |
| OO959_RS06505 (1351865) | 1351865..1352044 | + | 180 | WP_000119356.1 | hypothetical protein | - |
| OO959_RS06510 (1352063) | 1352063..1352548 | + | 486 | WP_000818166.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| OO959_RS06515 (1352777) | 1352777..1352854 | + | 78 | Protein_1274 | hypothetical protein | - |
| OO959_RS06520 (1353010) | 1353010..1353609 | + | 600 | WP_062882632.1 | DUF1367 family protein | - |
| OO959_RS06525 (1353609) | 1353609..1353899 | + | 291 | WP_000228018.1 | DUF1364 domain-containing protein | - |
| OO959_RS06530 (1353896) | 1353896..1354450 | + | 555 | WP_000640170.1 | DUF1133 family protein | - |
| OO959_RS06535 (1354721) | 1354721..1355071 | + | 351 | Protein_1278 | ORF6N domain-containing protein | - |
| OO959_RS06545 (1355617) | 1355617..1355751 | - | 135 | Protein_1279 | hypothetical protein | - |
| OO959_RS06550 (1355992) | 1355992..1357938 | + | 1947 | WP_151542873.1 | DUF1737 domain-containing protein | - |
| OO959_RS06555 (1358075) | 1358075..1358254 | + | 180 | WP_000143464.1 | DUF1378 family protein | - |
| OO959_RS06560 (1358295) | 1358295..1358540 | + | 246 | WP_001290230.1 | DUF826 domain-containing protein | - |
| OO959_RS06565 (1358618) | 1358618..1358833 | + | 216 | WP_001072899.1 | class II holin family protein | - |
| OO959_RS06570 (1358837) | 1358837..1359478 | + | 642 | WP_001015166.1 | hypothetical protein | - |
| OO959_RS06575 (1359488) | 1359488..1359802 | - | 315 | WP_000282141.1 | hypothetical protein | - |
| OO959_RS06580 (1359931) | 1359931..1360464 | + | 534 | WP_109063312.1 | lysozyme | - |
| OO959_RS06585 (1360624) | 1360624..1360761 | + | 138 | WP_000459349.1 | hypothetical protein | - |
| OO959_RS06590 (1360983) | 1360983..1361168 | + | 186 | WP_001208683.1 | Rz1 family lipoprotein | - |
| OO959_RS06595 (1361644) | 1361644..1362120 | + | 477 | WP_000373407.1 | DUF1441 family protein | - |
| OO959_RS06600 (1362117) | 1362117..1363121 | + | 1005 | Protein_1290 | phage terminase large subunit family protein | - |
| OO959_RS06605 (1363286) | 1363286..1364524 | + | 1239 | WP_151542875.1 | Prophage integrase IntA ; Integrase | Integrase |
| OO959_RS06610 (1364537) | 1364537..1364740 | + | 204 | WP_001095275.1 | hypothetical protein | - |
| OO959_RS06615 (1364799) | 1364799..1365380 | + | 582 | WP_151542877.1 | BRO family protein | - |
| OO959_RS06620 (1365501) | 1365501..1365680 | - | 180 | WP_000190549.1 | YlcI/YnfO family protein | - |
| OO959_RS06625 (1365880) | 1365880..1366071 | + | 192 | WP_238928096.1 | host cell division inhibitor Icd-like protein | - |
| OO959_RS06630 (1366075) | 1366075..1366440 | + | 366 | WP_000551742.1 | hypothetical protein | - |
| OO959_RS06635 (1366433) | 1366433..1366666 | + | 234 | WP_151542879.1 | hypothetical protein | - |
| OO959_RS06640 (1366659) | 1366659..1366858 | + | 200 | Protein_1298 | hypothetical protein | - |
| OO959_RS06645 (1366863) | 1366863..1367153 | + | 291 | WP_000728900.1 | DUF4222 domain-containing protein | - |
| OO959_RS06650 (1367150) | 1367150..1368904 | + | 1755 | WP_151542881.1 | DUF5906 domain-containing protein | - |
| OO959_RS06655 (1369252) | 1369252..1369503 | + | 252 | WP_151542883.1 | hypothetical protein | - |
| OO959_RS06660 (1369500) | 1369500..1369910 | + | 411 | WP_000126694.1 | single-stranded DNA-binding protein | - |
| OO959_RS06665 (1370561) | 1370561..1372450 | + | 1890 | WP_000860403.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| OO959_RS06670 (1372708) | 1372708..1372989 | + | 282 | WP_000133409.1 | hypothetical protein | - |
| OO959_RS06675 (1373361) | 1373361..1374485 | + | 1125 | Protein_1305 | phage terminase large subunit family protein | - |
| OO959_RS06680 (1374482) | 1374482..1374695 | + | 214 | Protein_1306 | hypothetical protein | - |
| OO959_RS06685 (1374695) | 1374695..1376197 | + | 1503 | WP_000974564.1 | phage portal protein | - |
| OO959_RS06690 (1376142) | 1376142..1378166 | + | 2025 | WP_001114424.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| OO959_RS06695 (1378254) | 1378254..1378580 | + | 327 | WP_001097065.1 | DUF2190 family protein | - |
| OO959_RS06700 (1378573) | 1378573..1378854 | + | 282 | WP_001281350.1 | DNA breaking-rejoining protein | - |
| OO959_RS06705 (1378857) | 1378857..1379480 | + | 624 | WP_000974966.1 | phage tail protein | - |
| OO959_RS06710 (1379493) | 1379493..1379891 | + | 399 | WP_000682716.1 | phage tail terminator protein | - |
| OO959_RS06715 (1379899) | 1379899..1380651 | + | 753 | WP_000235090.1 | Ig domain-containing protein | - |
| OO959_RS06720 (1380665) | 1380665..1381087 | + | 423 | WP_000479043.1 | phage minor tail protein G | - |
| OO959_RS06725 (1381114) | 1381114..1381416 | + | 303 | Protein_1315 | phage tail assembly protein T | - |
| OO959_RS06730 (1381466) | 1381466..1384111 | + | 2646 | WP_000918269.1 | phage tail tape measure protein | - |
| OO959_RS06735 (1384108) | 1384108..1384437 | + | 330 | WP_000847298.1 | phage tail protein | - |
| OO959_RS06740 (1384437) | 1384437..1385135 | + | 699 | WP_001301816.1 | phage minor tail protein L | - |
| OO959_RS06745 (1385146) | 1385146..1385889 | + | 744 | WP_000194798.1 | C40 family peptidase | - |
| OO959_RS06750 (1385886) | 1385886..1386464 | + | 579 | WP_001089939.1 | tail assembly protein | - |
| OO959_RS06755 (1386705) | 1386705..1390181 | + | 3477 | WP_151542887.1 | host specificity protein J | - |
| OO959_RS06760 (1390249) | 1390249..1390848 | + | 600 | WP_001230428.1 | Outer membrane protein X | VF |
| OO959_RS06765 (1390913) | 1390913..1392226 | + | 1314 | WP_151545402.1 | ISNCY family transposase KIS | Transposase |
| OO959_RS06770 (1392228) | 1392228..1392497 | + | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| OO959_RS06775 (1393226) | 1393226..1393882 | + | 657 | WP_000812736.1 | protein-serine/threonine phosphatase | - |
| OO959_RS06780 (1393890) | 1393890..1394075 | - | 186 | WP_151542963.1 | YebW family protein | - |
| OO959_RS06785 (1394180) | 1394180..1394416 | - | 237 | WP_001295499.1 | YebV family protein | - |
| OO959_RS06790 (1394534) | 1394534..1395973 | - | 1440 | WP_001302304.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| OO959_RS06795 (1396054) | 1396054..1398687 | - | 2634 | WP_001302055.1 | hypothetical protein | VF |
| OO959_RS06800 (1398656) | 1398656..1399939 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| OO959_RS06805 (1400069) | 1400069..1400566 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| OO959_RS06810 (1400663) | 1400663..1401361 | + | 699 | WP_000431368.1 | RNA chaperone ProQ | - |
| OO959_RS06815 (1401381) | 1401381..1403429 | + | 2049 | WP_001055778.1 | carboxy terminal-processing peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|